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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE DETERMINATION OF DNA METHYLATION LESIONS N1-MEA AN IN DUPLEX DNA USING A CROSS-LINKED HOST-GUEST SYSTEM
Keywords PROTEIN-DNA COMPLEX, DIOXYGENASE, DNA DAMAGE, DNA REPAIR, IR METAL-BINDING, NUCLEUS, OXIDOREDUCTASE-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3H8R     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 204 1640 0
2  Other macromolecule    B 13 223 44
3  Other macromolecule   5'-D(*TP*CP*GP*CP*TP*AP*TP*AP*AP*TP*AP*CP*A)-3'  C 13 261 0
4  Ligand    A 1 0 6
5  Ligand   5'-D(*TP*CP*GP*CP*TP*AP*TP*AP*AP*TP*AP*CP*A)-3'  C 1 0 8
6 Water     218 0 218
total       450 2124 276

Proteins
Unit 1 HIS55 SER56 TRP57 ARG58 HIS59 ILE60 ARG61 ALA62 GLU63 GLY64 LEU65 ASP66 SER67 SER68 TYR69 THR70 VAL71 LEU72 PHE73 GLY74 LYS75 ALA76 GLU77 ALA78 ASP79 GLU80 ILE81 PHE82 GLN83 GLU84 LEU85 GLU86 LYS87 GLU88 VAL89 GLU90 TYR91 PHE92 THR93 GLY94 ALA95 LEU96 ALA97 ARG98 VAL99 GLN100 VAL101 PHE102 GLY103 LYS104 TRP105 HIS106 SER107 VAL108 PRO109 ARG110 LYS111 GLN112 ALA113 THR114 TYR115 GLY116 ASP117 ALA118 GLY119 LEU120 THR121 TYR122 THR123 PHE124 SER125 GLY126 LEU127 THR128 LEU129 SER130 PRO131 LYS132 PRO133 TRP134 ILE135 PRO136 VAL137 LEU138 GLU139 ARG140 ILE141 ARG142 ASP143 HIS144 VAL145 SER146 GLY147 VAL148 THR149 GLY150 GLN151 THR152 PHE153 ASN154 PHE155 VAL156 LEU157 ILE158 ASN159 ARG160 TYR161 LYS162 ASP163 GLY164 SER165 ASP166 HIS167 ILE168 GLY169 GLU170 HIS171 ARG172 ASP173 ASP174 CYS175 ARG176 GLU177 LEU178 ALA179 PRO180 GLY181 SER182 PRO183 ILE184 ALA185 SER186 VAL187 SER188 PHE189 GLY190 ALA191 SER192 ARG193 ASP194 PHE195 VAL196 PHE197 ARG198 HIS199 LYS200 ASP201 SER202 ARG203 GLY204 LYS205 SER206 PRO207 SER208 ARG209 ARG210 VAL211 ALA212 VAL213 VAL214 ARG215 LEU216 PRO217 LEU218 ALA219 HIS220 GLY221 SER222 LEU223 LEU224 MET225 MET226 ASN227 HIS228 PRO229 THR230 ASN231 THR232 HIS233 TRP234 TYR235 HIS236 SER237 LEU238 PRO239 VAL240 ARG241 LYS242 LYS243 VAL244 LEU245 ALA246 PRO247 ARG248 VAL249 ASN250 LEU251 THR252 PHE253 ARG254 LYS255 ILE256 LEU257 LEU258

Other macromolecules
Unit 2 DC259 DT260 DG261 DT262 DA263 DT264 2YR265 DA266 DT267 6MA268 DG269 DC270 DG271
Unit 3 DT272 DC273 DG274 DC275 DT276 DA277 DT278 DA279 DA280 DT281 DA282 DC283 DA284

Ligands
Unit 4 GOL301
Unit 5 TRS301

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany