3H8L - Sequence, Chains, Asymmetric and Biological Units

• Title: THE FIRST X-RAY STRUCTURE OF A SULFIDE:QUINONE OXIDOREDUCTASE: INSIGHTS INTO SULFIDE OXIDATION MECHANISM
• Keywords: MEMBRANE PROTEIN, COMPLETE FORM, ROSSMAN-LIKE FOLD, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3H8L	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	NADH OXIDASE	A	356	2755	0
2	Protein	NADH OXIDASE	B	356	2755	0
3	Ligand	NADH OXIDASE	A	6	0	76
4	Ligand	NADH OXIDASE	B	7	0	81
5	Water			267	0	267
total				992	5510	424

Proteins

Unit 1

THR 2 LYS 3 VAL 4 LEU 5 VAL 6 LEU 7 GLY 8 GLY 9 ARG 10 PHE 11 GLY 12 ALA 13 LEU 14 THR 15 ALA 16 ALA 17 TYR 18 THR 19 LEU 20 LYS 21 ARG 22 LEU 23 VAL 24 GLY 25 SER 26 LYS 27 ALA 28 ASP 29 VAL 30 LYS 31 VAL 32 ILE 33 ASN 34 LYS 35 SER 36 ARG 37 PHE 38 SER 39 TYR 40 PHE 41 ARG 42 PRO 43 ALA 44 LEU 45 PRO 46 HIS 47 VAL 48 ALA 49 ILE 50 GLY 51 VAL 52 ARG 53 ASP 54 VAL 55 ASP 56 GLU 57 LEU 58 LYS 59 VAL 60 ASP 61 LEU 62 SER 63 GLU 64 ALA 65 LEU 66 PRO 67 GLU 68 LYS 69 GLY 70 ILE 71 GLN 72 PHE 73 GLN 74 GLU 75 GLY 76 THR 77 VAL 78 GLU 79 LYS 80 ILE 81 ASP 82 ALA 83 LYS 84 SER 85 SER 86 MET 87 VAL 88 TYR 89 TYR 90 THR 91 LYS 92 PRO 93 ASP 94 GLY 95 SER 96 MET 97 ALA 98 GLU 99 GLU 100 GLU 101 TYR 102 ASP 103 TYR 104 VAL 105 ILE 106 VAL 107 GLY 108 ILE 109 GLY 110 ALA 111 HIS 112 LEU 113 ALA 114 THR 115 GLU 116 LEU 117 VAL 118 LYS 119 GLY 120 TRP 121 ASP 122 LYS 123 TYR 124 GLY 125 TYR 126 SER 127 VAL 128 CYS 129 GLU 130 PRO 131 GLU 132 PHE 133 ALA 134 THR 135 LYS 136 LEU 137 ARG 138 GLU 139 LYS 140 LEU 141 GLU 142 SER 143 PHE 144 GLN 145 GLY 146 GLY 147 ASN 148 ILE 149 ALA 150 ILE 151 GLY 152 SER 153 GLY 154 PRO 155 PHE 156 TYR 157 GLN 158 GLY 159 HIS 160 ASN 161 PRO 162 LYS 163 PRO 164 LYS 165 VAL 166 PRO 167 GLU 168 ASN 169 PHE 170 VAL 171 PRO 172 ASN 173 ALA 174 ASP 175 SER 176 ALA 177 CYS 178 GLU 179 GLY 180 PRO 181 VAL 182 PHE 183 GLU 184 MET 185 SER 186 LEU 187 MET 188 LEU 189 HIS 190 GLY 191 TYR 192 PHE 193 LYS 194 LYS 195 LYS 196 GLY 197 MET 198 LEU 199 ASP 200 LYS 201 VAL 202 HIS 203 VAL 204 THR 205 VAL 206 PHE 207 SER 208 PRO 209 GLY 210 GLU 211 TYR 212 LEU 213 SER 214 ASP 215 LEU 216 SER 217 PRO 218 ASN 219 SER 220 ARG 221 LYS 222 ALA 223 VAL 224 ALA 225 SER 226 ILE 227 TYR 228 ASN 229 GLN 230 LEU 231 GLY 232 ILE 233 LYS 234 LEU 235 VAL 236 HIS 237 ASN 238 PHE 239 LYS 240 ILE 241 LYS 242 GLU 243 ILE 244 ARG 245 GLU 246 HIS 247 GLU 248 ILE 249 VAL 250 ASP 251 GLU 252 LYS 253 GLY 254 ASN 255 THR 256 ILE 257 PRO 258 ALA 259 ASP 260 ILE 261 THR 262 ILE 263 LEU 264 LEU 265 PRO 266 PRO 267 TYR 268 THR 269 GLY 270 ASN 271 PRO 272 ALA 273 LEU 274 LYS 275 ASN 276 SER 277 THR 278 PRO 279 ASP 280 LEU 281 VAL 282 ASP 283 ASP 284 GLY 285 GLY 286 PHE 287 ILE 288 PRO 289 THR 290 ASP 291 LEU 292 ASN 293 MET 294 VAL 295 SER 296 ILE 297 LYS 298 TYR 299 ASP 300 ASN 301 VAL 302 TYR 303 ALA 304 VAL 305 GLY 306 ASP 307 ALA 308 ASN 309 SER 310 MET 311 THR 312 VAL 313 PRO 314 LYS 315 LEU 316 GLY 317 TYR 318 LEU 319 ALA 320 VAL 321 MET 322 THR 323 GLY 324 ARG 325 ILE 326 ALA 327 ALA 328 GLN 329 HIS 330 LEU 331 ALA 332 ASN 333 ARG 334 LEU 335 GLY 336 VAL 337 PRO 338 THR 339 LYS 340 VAL 341 ASP 342 LYS 343 TYR 344 TYR 345 PRO 346 THR 347 ILE 348 VAL 349 CYS 350 VAL 351 ALA 352 ASP 353 ASN 354 PRO 355 TYR 356 GLU 357

Unit 2

THR 2 LYS 3 VAL 4 LEU 5 VAL 6 LEU 7 GLY 8 GLY 9 ARG 10 PHE 11 GLY 12 ALA 13 LEU 14 THR 15 ALA 16 ALA 17 TYR 18 THR 19 LEU 20 LYS 21 ARG 22 LEU 23 VAL 24 GLY 25 SER 26 LYS 27 ALA 28 ASP 29 VAL 30 LYS 31 VAL 32 ILE 33 ASN 34 LYS 35 SER 36 ARG 37 PHE 38 SER 39 TYR 40 PHE 41 ARG 42 PRO 43 ALA 44 LEU 45 PRO 46 HIS 47 VAL 48 ALA 49 ILE 50 GLY 51 VAL 52 ARG 53 ASP 54 VAL 55 ASP 56 GLU 57 LEU 58 LYS 59 VAL 60 ASP 61 LEU 62 SER 63 GLU 64 ALA 65 LEU 66 PRO 67 GLU 68 LYS 69 GLY 70 ILE 71 GLN 72 PHE 73 GLN 74 GLU 75 GLY 76 THR 77 VAL 78 GLU 79 LYS 80 ILE 81 ASP 82 ALA 83 LYS 84 SER 85 SER 86 MET 87 VAL 88 TYR 89 TYR 90 THR 91 LYS 92 PRO 93 ASP 94 GLY 95 SER 96 MET 97 ALA 98 GLU 99 GLU 100 GLU 101 TYR 102 ASP 103 TYR 104 VAL 105 ILE 106 VAL 107 GLY 108 ILE 109 GLY 110 ALA 111 HIS 112 LEU 113 ALA 114 THR 115 GLU 116 LEU 117 VAL 118 LYS 119 GLY 120 TRP 121 ASP 122 LYS 123 TYR 124 GLY 125 TYR 126 SER 127 VAL 128 CYS 129 GLU 130 PRO 131 GLU 132 PHE 133 ALA 134 THR 135 LYS 136 LEU 137 ARG 138 GLU 139 LYS 140 LEU 141 GLU 142 SER 143 PHE 144 GLN 145 GLY 146 GLY 147 ASN 148 ILE 149 ALA 150 ILE 151 GLY 152 SER 153 GLY 154 PRO 155 PHE 156 TYR 157 GLN 158 GLY 159 HIS 160 ASN 161 PRO 162 LYS 163 PRO 164 LYS 165 VAL 166 PRO 167 GLU 168 ASN 169 PHE 170 VAL 171 PRO 172 ASN 173 ALA 174 ASP 175 SER 176 ALA 177 CYS 178 GLU 179 GLY 180 PRO 181 VAL 182 PHE 183 GLU 184 MET 185 SER 186 LEU 187 MET 188 LEU 189 HIS 190 GLY 191 TYR 192 PHE 193 LYS 194 LYS 195 LYS 196 GLY 197 MET 198 LEU 199 ASP 200 LYS 201 VAL 202 HIS 203 VAL 204 THR 205 VAL 206 PHE 207 SER 208 PRO 209 GLY 210 GLU 211 TYR 212 LEU 213 SER 214 ASP 215 LEU 216 SER 217 PRO 218 ASN 219 SER 220 ARG 221 LYS 222 ALA 223 VAL 224 ALA 225 SER 226 ILE 227 TYR 228 ASN 229 GLN 230 LEU 231 GLY 232 ILE 233 LYS 234 LEU 235 VAL 236 HIS 237 ASN 238 PHE 239 LYS 240 ILE 241 LYS 242 GLU 243 ILE 244 ARG 245 GLU 246 HIS 247 GLU 248 ILE 249 VAL 250 ASP 251 GLU 252 LYS 253 GLY 254 ASN 255 THR 256 ILE 257 PRO 258 ALA 259 ASP 260 ILE 261 THR 262 ILE 263 LEU 264 LEU 265 PRO 266 PRO 267 TYR 268 THR 269 GLY 270 ASN 271 PRO 272 ALA 273 LEU 274 LYS 275 ASN 276 SER 277 THR 278 PRO 279 ASP 280 LEU 281 VAL 282 ASP 283 ASP 284 GLY 285 GLY 286 PHE 287 ILE 288 PRO 289 THR 290 ASP 291 LEU 292 ASN 293 MET 294 VAL 295 SER 296 ILE 297 LYS 298 TYR 299 ASP 300 ASN 301 VAL 302 TYR 303 ALA 304 VAL 305 GLY 306 ASP 307 ALA 308 ASN 309 SER 310 MET 311 THR 312 VAL 313 PRO 314 LYS 315 LEU 316 GLY 317 TYR 318 LEU 319 ALA 320 VAL 321 MET 322 THR 323 GLY 324 ARG 325 ILE 326 ALA 327 ALA 328 GLN 329 HIS 330 LEU 331 ALA 332 ASN 333 ARG 334 LEU 335 GLY 336 VAL 337 PRO 338 THR 339 LYS 340 VAL 341 ASP 342 LYS 343 TYR 344 TYR 345 PRO 346 THR 347 ILE 348 VAL 349 CYS 350 VAL 351 ALA 352 ASP 353 ASN 354 PRO 355 TYR 356 GLU 357

Ligands

Unit 3	PO4 410 FAD 1001 S3H 1002 PO4 2001 PO4 2002 PO4 2003
Unit 4	PO4 410 PO4 411 FAD 1001 S3H 1002 PO4 2001 PO4 2002 PO4 2003