Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title NOROVIRUS POLYMERASE+PRIMER/TEMPLATE+CTP COMPLEX AT 6 MM MNC
Keywords CALICIVIRUSES, VIRAL RNA POLYMERASE, HYDROLASE, NUCLEOTIDE-B NUCLEOTIDYLTRANSFERASE, PROTEASE, RNA REPLICATION, RNA-DIRE POLYMERASE, THIOL PROTEASE, TRANSFERASE, TRANSFERASE-RNA CO
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3H5Y     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RNA DEPENDENT RNA POLYMERASE  A 474 3725 0
2  RNA    P 7 152 0
3  RNA    T 9 192 0
4  Ligand   RNA DEPENDENT RNA POLYMERASE  A 8 0 51
5  Ligand   5'-R(P*UP*GP*CP*CP*CP*GP*GP*GP*C)-3'  T 1 0 6
6 Water     372 0 372
total       871 4069 429
Proteins
Unit 1 LYS5 GLY6 THR7 TYR8 CYS9 GLY10 ALA11 PRO12 ILE13 LEU14 GLY15 PRO16 GLY17 SER18 ALA19 PRO20 LYS21 LEU22 SER23 THR24 LYS25 THR26 LYS27 PHE28 TRP29 ARG30 SER31 SER32 THR33 ALA34 PRO35 LEU36 PRO37 PRO38 GLY39 THR40 TYR41 GLU42 PRO43 ALA44 TYR45 LEU46 GLY47 GLY48 LYS49 ASP50 PRO51 ARG52 VAL53 LYS54 GLY55 GLY56 PRO57 SER58 LEU59 GLN60 GLN61 VAL62 MET63 ARG64 ASP65 GLN66 LEU67 LYS68 PRO69 PHE70 THR71 GLU72 PRO73 ARG74 GLY75 LYS76 PRO77 PRO78 LYS79 PRO80 SER81 VAL82 LEU83 GLU84 ALA85 ALA86 LYS87 LYS88 THR89 ILE90 ILE91 ASN92 VAL93 LEU94 GLU95 GLN96 THR97 ILE98 ASP99 PRO100 PRO101 ASP102 LYS103 TRP104 SER105 PHE106 ALA107 GLN108 ALA109 CYS110 ALA111 SER112 LEU113 ASP114 LYS115 THR116 THR117 SER118 SER119 GLY120 HIS121 PRO122 HIS123 HIS124 MET125 ARG126 LYS127 ASN128 ASP129 CYS130 TRP131 ASN132 GLY133 GLU134 SER135 PHE136 THR137 GLY138 LYS139 LEU140 ALA141 ASP142 GLN143 ALA144 SER145 LYS146 ALA147 ASN148 LEU149 MET150 PHE151 GLU152 GLU153 GLY154 LYS155 ASN156 MET157 THR158 PRO159 VAL160 TYR161 THR162 GLY163 ALA164 LEU165 LYS166 ASP167 GLU168 LEU169 VAL170 LYS171 THR172 ASP173 LYS174 ILE175 TYR176 GLY177 LYS178 ILE179 LYS180 LYS181 ARG182 LEU183 LEU184 TRP185 GLY186 SER187 ASP188 LEU189 ALA190 THR191 MET192 ILE193 ARG194 CYS195 ALA196 ARG197 ALA198 PHE199 GLY200 GLY201 LEU202 MET203 ASP204 GLU205 LEU206 LYS207 THR208 HIS209 CYS210 VAL211 THR212 LEU213 PRO214 ILE215 ARG216 VAL217 GLY218 MET219 ASN220 MET221 ASN222 GLU223 ASP224 GLY225 PRO226 ILE227 ILE228 PHE229 GLU230 ARG231 HIS232 SER233 ARG234 TYR235 ARG236 TYR237 HIS238 TYR239 ASP240 ALA241 ASP242 TYR243 SER244 ARG245 TRP246 ASP247 SER248 THR249 GLN250 GLN251 ARG252 ALA253 VAL254 LEU255 ALA256 ALA257 ALA258 LEU259 GLU260 ILE261 MET262 VAL263 LYS264 PHE265 SER266 SER267 GLU268 PRO269 HIS270 LEU271 ALA272 GLN273 VAL274 VAL275 ALA276 GLU277 ASP278 LEU279 LEU280 SER281 PRO282 SER283 VAL284 VAL285 ASP286 VAL287 GLY288 ASP289 PHE290 THR291 ILE292 SER293 ILE294 ASN295 GLU296 GLY297 LEU298 PRO299 SER300 GLY301 VAL302 PRO303 CYS304 THR305 SER306 GLN307 TRP308 ASN309 SER310 ILE311 ALA312 HIS313 TRP314 LEU315 LEU316 THR317 LEU318 CYS319 ALA320 LEU321 SER322 GLU323 VAL324 THR325 ASN326 LEU327 SER328 PRO329 ASP330 ILE331 ILE332 GLN333 ALA334 ASN335 SER336 LEU337 PHE338 SER339 PHE340 TYR341 GLY342 ASP343 ASP344 GLU345 ILE346 VAL347 SER348 THR349 ASP350 ILE351 LYS352 LEU353 ASP354 PRO355 GLU356 LYS357 LEU358 THR359 ALA360 LYS361 LEU362 LYS363 GLU364 TYR365 GLY366 LEU367 LYS368 PRO369 THR370 ARG371 PRO372 PRO378 LEU379 VAL380 ILE381 SER382 GLU383 ASP384 LEU385 ASN386 GLY387 LEU388 THR389 PHE390 LEU391 ARG392 ARG393 THR394 VAL395 THR396 ARG397 ASP398 PRO399 ALA400 GLY401 TRP402 PHE403 GLY404 LYS405 LEU406 GLU407 GLN408 SER409 SER410 ILE411 LEU412 ARG413 GLN414 MET415 TYR416 TRP417 THR418 ARG419 GLY420 PRO421 ASN422 HIS423 GLU424 ASP425 PRO426 SER427 GLU428 THR429 MET430 ILE431 PRO432 HIS433 SER434 GLN435 ARG436 PRO437 ILE438 GLN439 LEU440 MET441 SER442 LEU443 LEU444 GLY445 GLU446 ALA447 ALA448 LEU449 HIS450 GLY451 PRO452 ALA453 PHE454 TYR455 SER456 LYS457 ILE458 SER459 LYS460 LEU461 VAL462 ILE463 ALA464 GLU465 LEU466 ASP472 PHE473 TYR474 VAL475 PRO476 ARG477 GLN478 GLU479 PRO480 MET481 PHE482 ARG483 TRP484 MET485 ARG486 PHE487 SER488
Nucleic acids
Unit 2 G2 C3 C4 C5 G6 G7 G8
Unit 3 U1 G2 C3 C4 C5 G6 G7 G8 C9
Ligands
Unit 4 MN511 MN512 MN513 MN514 CTP515 GOL516 GOL517 GOL518
Unit 5 GOL509
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany