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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF AN MBP-DER P 7 FUSION PROTEIN
Keywords MBP FUSION, DERP7, AHA1/BPI DOMAIN-LIKE, SUPER ROLL, SUGAR T TRANSPORT, ALLERGEN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3H4Z     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MALTOSE-BINDING PERIPLASMIC PROTEIN FUSED WITH AL DERP7  A 568 4257 0
2  Protein   MALTOSE-BINDING PERIPLASMIC PROTEIN FUSED WITH AL DERP7  B 563 4220 0
3  Protein   MALTOSE-BINDING PERIPLASMIC PROTEIN FUSED WITH AL DERP7  C 552 4130 0
4  Ligand    D 2 0 23
5  Ligand    E 2 0 23
6  Ligand    F 2 0 23
7  Ligand   MALTOSE-BINDING PERIPLASMIC PROTEIN FUSED WITH AL DERP7  A 1 0 1
8 Water     322 0 322
total       2012 12607 392
Proteins
Unit 1 LYS1 ILE2 GLU3 GLU4 GLY5 LYS6 LEU7 VAL8 ILE9 TRP10 ILE11 ASN12 GLY13 ASP14 LYS15 GLY16 TYR17 ASN18 GLY19 LEU20 ALA21 GLU22 VAL23 GLY24 LYS25 LYS26 PHE27 GLU28 LYS29 ASP30 THR31 GLY32 ILE33 LYS34 VAL35 THR36 VAL37 GLU38 HIS39 PRO40 ASP41 LYS42 LEU43 GLU44 GLU45 LYS46 PHE47 PRO48 GLN49 VAL50 ALA51 ALA52 THR53 GLY54 ASP55 GLY56 PRO57 ASP58 ILE59 ILE60 PHE61 TRP62 ALA63 HIS64 ASP65 ARG66 PHE67 GLY68 GLY69 TYR70 ALA71 GLN72 SER73 GLY74 LEU75 LEU76 ALA77 GLU78 ILE79 THR80 PRO81 ALA82 ALA83 ALA84 PHE85 GLN86 ASP87 LYS88 LEU89 TYR90 PRO91 PHE92 THR93 TRP94 ASP95 ALA96 VAL97 ARG98 TYR99 ASN100 GLY101 LYS102 LEU103 ILE104 ALA105 TYR106 PRO107 ILE108 ALA109 VAL110 GLU111 ALA112 LEU113 SER114 LEU115 ILE116 TYR117 ASN118 LYS119 ASP120 LEU121 LEU122 PRO123 ASN124 PRO125 PRO126 LYS127 THR128 TRP129 GLU130 GLU131 ILE132 PRO133 ALA134 LEU135 ASP136 LYS137 GLU138 LEU139 LYS140 ALA141 LYS142 GLY143 LYS144 SER145 ALA146 LEU147 MET148 PHE149 ASN150 LEU151 GLN152 GLU153 PRO154 TYR155 PHE156 THR157 TRP158 PRO159 LEU160 ILE161 ALA162 ALA163 ASP164 GLY165 GLY166 TYR167 ALA168 PHE169 LYS170 TYR171 ALA172 ALA173 GLY174 LYS175 TYR176 ASP177 ILE178 LYS179 ASP180 VAL181 GLY182 VAL183 ASP184 ASN185 ALA186 GLY187 ALA188 LYS189 ALA190 GLY191 LEU192 THR193 PHE194 LEU195 VAL196 ASP197 LEU198 ILE199 LYS200 ASN201 LYS202 HIS203 MET204 ASN205 ALA206 ASP207 THR208 ASP209 TYR210 SER211 ILE212 ALA213 GLU214 ALA215 ALA216 PHE217 ASN218 LYS219 GLY220 GLU221 THR222 ALA223 MET224 THR225 ILE226 ASN227 GLY228 PRO229 TRP230 ALA231 TRP232 SER233 ASN234 ILE235 ASP236 THR237 SER238 ALA239 VAL240 ASN241 TYR242 GLY243 VAL244 THR245 VAL246 LEU247 PRO248 THR249 PHE250 LYS251 GLY252 GLN253 PRO254 SER255 LYS256 PRO257 PHE258 VAL259 GLY260 VAL261 LEU262 SER263 ALA264 GLY265 ILE266 ASN267 ALA268 ALA269 SER270 PRO271 ASN272 LYS273 GLU274 LEU275 ALA276 LYS277 GLU278 PHE279 LEU280 GLU281 ASN282 TYR283 LEU284 LEU285 THR286 ASP287 GLU288 GLY289 LEU290 GLU291 ALA292 VAL293 ASN294 LYS295 ASP296 LYS297 PRO298 LEU299 GLY300 ALA301 VAL302 ALA303 LEU304 LYS305 SER306 TYR307 GLU308 GLU309 GLU310 LEU311 ALA312 LYS313 ASP314 PRO315 ARG316 ILE317 ALA318 ALA319 THR320 MET321 GLU322 ASN323 ALA324 GLN325 LYS326 GLY327 GLU328 ILE329 MET330 PRO331 ASN332 ILE333 PRO334 GLN335 MET336 SER337 ALA338 PHE339 TRP340 TYR341 ALA342 VAL343 ARG344 THR345 ALA346 VAL347 ILE348 ASN349 ALA350 ALA351 SER352 GLY353 ARG354 GLN355 THR356 VAL357 ASP358 ALA359 ALA360 LEU361 ALA362 ALA363 ALA364 GLN365 THR366 ASN367 ALA368 ALA369 ALA370 ASP1018 PRO1019 ILE1020 HIS1021 TYR1022 ASP1023 LYS1024 ILE1025 THR1026 GLU1027 GLU1028 ILE1029 ASN1030 LYS1031 ALA1032 VAL1033 ASP1034 GLU1035 ALA1036 VAL1037 ALA1038 ALA1039 ILE1040 GLU1041 LYS1042 SER1043 GLU1044 THR1045 PHE1046 ASP1047 PRO1048 MET1049 LYS1050 VAL1051 PRO1052 ASP1053 HIS1054 SER1055 ASP1056 LYS1057 PHE1058 GLU1059 ARG1060 HIS1061 ILE1062 GLY1063 ILE1064 ILE1065 ASP1066 LEU1067 LYS1068 GLY1069 GLU1070 LEU1071 ASP1072 MET1073 ARG1074 ASN1075 ILE1076 GLN1077 VAL1078 ARG1079 GLY1080 LEU1081 LYS1082 GLN1083 MET1084 LYS1085 ARG1086 VAL1087 GLY1088 ASP1089 ALA1090 ASN1091 VAL1092 LYS1093 SER1094 GLU1095 ASP1096 GLY1097 VAL1098 VAL1099 LYS1100 ALA1101 HIS1102 LEU1103 LEU1104 VAL1105 GLY1106 VAL1107 HIS1108 ASP1109 ASP1110 VAL1111 VAL1112 SER1113 MET1114 GLU1115 TYR1116 ASP1117 LEU1118 ALA1119 TYR1120 LYS1121 LEU1122 GLY1123 ASP1124 LEU1125 HIS1126 PRO1127 ASN1128 THR1129 HIS1130 VAL1131 ILE1132 SER1133 ASP1134 ILE1135 GLN1136 ASP1137 PHE1138 VAL1139 VAL1140 GLU1141 LEU1142 SER1143 LEU1144 GLU1145 VAL1146 SER1147 GLU1148 GLU1149 GLY1150 ASN1151 MET1152 THR1153 LEU1154 THR1155 SER1156 PHE1157 GLU1158 VAL1159 ARG1160 GLN1161 PHE1162 ALA1163 ASN1164 VAL1165 VAL1166 ASN1167 HIS1168 ILE1169 GLY1170 GLY1171 LEU1172 SER1173 ILE1174 LEU1175 ASP1176 PRO1177 ILE1178 PHE1179 ALA1180 VAL1181 LEU1182 SER1183 ASP1184 VAL1185 LEU1186 THR1187 ALA1188 ILE1189 PHE1190 GLN1191 ASP1192 THR1193 VAL1194 ARG1195 ALA1196 GLU1197 MET1198 THR1199 LYS1200 VAL1201 LEU1202 ALA1203 PRO1204 ALA1205 PHE1206 LYS1207 LYS1208 GLU1209 LEU1210 GLU1211 ARG1212 ASN1213 ASN1214 GLN1215
Unit 2 LYS1 ILE2 GLU3 GLU4 GLY5 LYS6 LEU7 VAL8 ILE9 TRP10 ILE11 ASN12 GLY13 ASP14 LYS15 GLY16 TYR17 ASN18 GLY19 LEU20 ALA21 GLU22 VAL23 GLY24 LYS25 LYS26 PHE27 GLU28 LYS29 ASP30 THR31 GLY32 ILE33 LYS34 VAL35 THR36 VAL37 GLU38 HIS39 PRO40 ASP41 LYS42 LEU43 GLU44 GLU45 LYS46 PHE47 PRO48 GLN49 VAL50 ALA51 ALA52 THR53 GLY54 ASP55 GLY56 PRO57 ASP58 ILE59 ILE60 PHE61 TRP62 ALA63 HIS64 ASP65 ARG66 PHE67 GLY68 GLY69 TYR70 ALA71 GLN72 SER73 GLY74 LEU75 LEU76 ALA77 GLU78 ILE79 THR80 PRO81 ALA82 ALA83 ALA84 PHE85 GLN86 ASP87 LYS88 LEU89 TYR90 PRO91 PHE92 THR93 TRP94 ASP95 ALA96 VAL97 ARG98 TYR99 ASN100 GLY101 LYS102 LEU103 ILE104 ALA105 TYR106 PRO107 ILE108 ALA109 VAL110 GLU111 ALA112 LEU113 SER114 LEU115 ILE116 TYR117 ASN118 LYS119 ASP120 LEU121 LEU122 PRO123 ASN124 PRO125 PRO126 LYS127 THR128 TRP129 GLU130 GLU131 ILE132 PRO133 ALA134 LEU135 ASP136 LYS137 GLU138 LEU139 LYS140 ALA141 LYS142 GLY143 LYS144 SER145 ALA146 LEU147 MET148 PHE149 ASN150 LEU151 GLN152 GLU153 PRO154 TYR155 PHE156 THR157 TRP158 PRO159 LEU160 ILE161 ALA162 ALA163 ASP164 GLY165 GLY166 TYR167 ALA168 PHE169 LYS170 TYR171 ALA172 ALA173 GLY174 LYS175 TYR176 ASP177 ILE178 LYS179 ASP180 VAL181 GLY182 VAL183 ASP184 ASN185 ALA186 GLY187 ALA188 LYS189 ALA190 GLY191 LEU192 THR193 PHE194 LEU195 VAL196 ASP197 LEU198 ILE199 LYS200 ASN201 LYS202 HIS203 MET204 ASN205 ALA206 ASP207 THR208 ASP209 TYR210 SER211 ILE212 ALA213 GLU214 ALA215 ALA216 PHE217 ASN218 LYS219 GLY220 GLU221 THR222 ALA223 MET224 THR225 ILE226 ASN227 GLY228 PRO229 TRP230 ALA231 TRP232 SER233 ASN234 ILE235 ASP236 THR237 SER238 ALA239 VAL240 ASN241 TYR242 GLY243 VAL244 THR245 VAL246 LEU247 PRO248 THR249 PHE250 LYS251 GLY252 GLN253 PRO254 SER255 LYS256 PRO257 PHE258 VAL259 GLY260 VAL261 LEU262 SER263 ALA264 GLY265 ILE266 ASN267 ALA268 ALA269 SER270 PRO271 ASN272 LYS273 GLU274 LEU275 ALA276 LYS277 GLU278 PHE279 LEU280 GLU281 ASN282 TYR283 LEU284 LEU285 THR286 ASP287 GLU288 GLY289 LEU290 GLU291 ALA292 VAL293 ASN294 LYS295 ASP296 LYS297 PRO298 LEU299 GLY300 ALA301 VAL302 ALA303 LEU304 LYS305 SER306 TYR307 GLU308 GLU309 GLU310 LEU311 ALA312 LYS313 ASP314 PRO315 ARG316 ILE317 ALA318 ALA319 THR320 MET321 GLU322 ASN323 ALA324 GLN325 LYS326 GLY327 GLU328 ILE329 MET330 PRO331 ASN332 ILE333 PRO334 GLN335 MET336 SER337 ALA338 PHE339 TRP340 TYR341 ALA342 VAL343 ARG344 THR345 ALA346 VAL347 ILE348 ASN349 ALA350 ALA351 SER352 GLY353 ARG354 GLN355 THR356 VAL357 ASP358 ALA359 ALA360 LEU361 ALA362 ALA363 ALA364 GLN365 THR366 ASN367 ALA368 ALA369 ALA370 ASP1018 PRO1019 ILE1020 HIS1021 TYR1022 ASP1023 LYS1024 ILE1025 THR1026 GLU1027 GLU1028 ILE1029 ASN1030 LYS1031 ALA1032 VAL1033 ASP1034 GLU1035 ALA1036 VAL1037 ALA1038 ALA1039 ILE1040 GLU1041 LYS1042 SER1043 GLU1044 THR1045 PHE1046 ASP1047 PRO1048 MET1049 LYS1050 VAL1051 PRO1052 ASP1053 HIS1054 SER1055 ASP1056 LYS1057 PHE1058 GLU1059 ARG1060 HIS1061 ILE1062 LYS1068 GLY1069 GLU1070 LEU1071 ASP1072 MET1073 ARG1074 ASN1075 ILE1076 GLN1077 VAL1078 ARG1079 GLY1080 LEU1081 LYS1082 GLN1083 MET1084 LYS1085 ARG1086 VAL1087 GLY1088 ASP1089 ALA1090 ASN1091 VAL1092 LYS1093 SER1094 GLU1095 ASP1096 GLY1097 VAL1098 VAL1099 LYS1100 ALA1101 HIS1102 LEU1103 LEU1104 VAL1105 GLY1106 VAL1107 HIS1108 ASP1109 ASP1110 VAL1111 VAL1112 SER1113 MET1114 GLU1115 TYR1116 ASP1117 LEU1118 ALA1119 TYR1120 LYS1121 LEU1122 GLY1123 ASP1124 LEU1125 HIS1126 PRO1127 ASN1128 THR1129 HIS1130 VAL1131 ILE1132 SER1133 ASP1134 ILE1135 GLN1136 ASP1137 PHE1138 VAL1139 VAL1140 GLU1141 LEU1142 SER1143 LEU1144 GLU1145 VAL1146 SER1147 GLU1148 GLU1149 GLY1150 ASN1151 MET1152 THR1153 LEU1154 THR1155 SER1156 PHE1157 GLU1158 VAL1159 ARG1160 GLN1161 PHE1162 ALA1163 ASN1164 VAL1165 VAL1166 ASN1167 HIS1168 ILE1169 GLY1170 GLY1171 LEU1172 SER1173 ILE1174 LEU1175 ASP1176 PRO1177 ILE1178 PHE1179 ALA1180 VAL1181 LEU1182 SER1183 ASP1184 VAL1185 LEU1186 THR1187 ALA1188 ILE1189 PHE1190 GLN1191 ASP1192 THR1193 VAL1194 ARG1195 ALA1196 GLU1197 MET1198 THR1199 LYS1200 VAL1201 LEU1202 ALA1203 PRO1204 ALA1205 PHE1206 LYS1207 LYS1208 GLU1209 LEU1210 GLU1211 ARG1212 ASN1213 ASN1214 GLN1215
Unit 3 ILE2 GLU3 GLU4 GLY5 LYS6 LEU7 VAL8 ILE9 TRP10 ILE11 ASN12 GLY13 ASP14 LYS15 GLY16 TYR17 ASN18 GLY19 LEU20 ALA21 GLU22 VAL23 GLY24 LYS25 LYS26 PHE27 GLU28 LYS29 ASP30 THR31 GLY32 ILE33 LYS34 VAL35 THR36 VAL37 GLU38 HIS39 PRO40 ASP41 LYS42 LEU43 GLU44 GLU45 LYS46 PHE47 PRO48 GLN49 VAL50 ALA51 ALA52 THR53 GLY54 ASP55 GLY56 PRO57 ASP58 ILE59 ILE60 PHE61 TRP62 ALA63 HIS64 ASP65 ARG66 PHE67 GLY68 GLY69 TYR70 ALA71 GLN72 SER73 GLY74 LEU75 LEU76 ALA77 GLU78 ILE79 THR80 PRO81 ALA82 ALA83 ALA84 PHE85 GLN86 ASP87 LYS88 LEU89 TYR90 PRO91 PHE92 THR93 TRP94 ASP95 ALA96 VAL97 ARG98 TYR99 ASN100 GLY101 LYS102 LEU103 ILE104 ALA105 TYR106 PRO107 ILE108 ALA109 VAL110 GLU111 ALA112 LEU113 SER114 LEU115 ILE116 TYR117 ASN118 LYS119 ASP120 LEU121 LEU122 PRO123 ASN124 PRO125 PRO126 LYS127 THR128 TRP129 GLU130 GLU131 ILE132 PRO133 ALA134 LEU135 ASP136 LYS137 GLU138 LEU139 LYS140 ALA141 LYS142 GLY143 LYS144 SER145 ALA146 LEU147 MET148 PHE149 ASN150 LEU151 GLN152 GLU153 PRO154 TYR155 PHE156 THR157 TRP158 PRO159 LEU160 ILE161 ALA162 ALA163 ASP164 GLY165 GLY166 TYR167 ALA168 PHE169 LYS170 TYR171 ALA172 ALA173 GLY174 LYS175 TYR176 ASP177 ILE178 LYS179 ASP180 VAL181 GLY182 VAL183 ASP184 ASN185 ALA186 GLY187 ALA188 LYS189 ALA190 GLY191 LEU192 THR193 PHE194 LEU195 VAL196 ASP197 LEU198 ILE199 LYS200 ASN201 LYS202 HIS203 MET204 ASN205 ALA206 ASP207 THR208 ASP209 TYR210 SER211 ILE212 ALA213 GLU214 ALA215 ALA216 PHE217 ASN218 LYS219 GLY220 GLU221 THR222 ALA223 MET224 THR225 ILE226 ASN227 GLY228 PRO229 TRP230 ALA231 TRP232 SER233 ASN234 ILE235 ASP236 THR237 SER238 ALA239 VAL240 ASN241 TYR242 GLY243 VAL244 THR245 VAL246 LEU247 PRO248 THR249 PHE250 LYS251 GLY252 GLN253 PRO254 SER255 LYS256 PRO257 PHE258 VAL259 GLY260 VAL261 LEU262 SER263 ALA264 GLY265 ILE266 ASN267 ALA268 ALA269 SER270 PRO271 ASN272 LYS273 GLU274 LEU275 ALA276 LYS277 GLU278 PHE279 LEU280 GLU281 ASN282 TYR283 LEU284 LEU285 THR286 ASP287 GLU288 GLY289 LEU290 GLU291 ALA292 VAL293 ASN294 LYS295 ASP296 LYS297 PRO298 LEU299 GLY300 ALA301 VAL302 ALA303 LEU304 LYS305 SER306 TYR307 GLU308 GLU309 GLU310 LEU311 ALA312 LYS313 ASP314 PRO315 ARG316 ILE317 ALA318 ALA319 THR320 MET321 GLU322 ASN323 ALA324 GLN325 LYS326 GLY327 GLU328 ILE329 MET330 PRO331 ASN332 ILE333 PRO334 GLN335 MET336 SER337 ALA338 PHE339 TRP340 TYR341 ALA342 VAL343 ARG344 THR345 ALA346 VAL347 ILE348 ASN349 ALA350 ALA351 SER352 GLY353 ARG354 GLN355 THR356 VAL357 ASP358 ALA359 ALA360 LEU361 ALA362 ALA363 ALA364 GLN365 THR366 ASN367 ALA368 ALA369 ALA370 ASP1018 PRO1019 ILE1020 HIS1021 TYR1022 ASP1023 LYS1024 ILE1025 THR1026 GLU1027 GLU1028 ILE1029 ASN1030 LYS1031 ALA1032 VAL1033 ASP1034 GLU1035 ALA1036 VAL1037 ALA1038 ALA1039 ILE1040 GLU1041 LYS1042 SER1043 GLU1044 THR1045 PHE1046 ASP1047 PRO1048 MET1049 LYS1050 VAL1051 PRO1052 ASP1053 HIS1054 SER1055 ASP1056 LYS1057 PHE1058 LYS1068 GLY1069 GLU1070 LEU1071 ASP1072 MET1073 ARG1074 ASN1075 ILE1076 GLN1077 VAL1078 ARG1079 GLY1080 LEU1081 LYS1082 GLN1083 MET1084 LYS1085 ARG1086 VAL1087 GLY1088 ASP1089 ALA1090 ASN1091 VAL1092 LYS1093 SER1094 GLU1095 ASP1096 GLY1097 VAL1098 VAL1099 LYS1100 ALA1101 HIS1102 LEU1103 LEU1104 VAL1105 GLY1106 VAL1107 HIS1108 ASP1109 ASP1110 VAL1111 VAL1112 SER1113 MET1114 GLU1115 TYR1116 ASP1117 LEU1118 ALA1119 TYR1120 LYS1121 PRO1127 ASN1128 THR1129 HIS1130 VAL1131 ILE1132 SER1133 ASP1134 ILE1135 GLN1136 ASP1137 PHE1138 VAL1139 VAL1140 GLU1141 LEU1142 SER1143 LEU1144 GLU1145 VAL1146 SER1147 GLU1148 GLU1149 GLY1150 ASN1151 MET1152 THR1153 LEU1154 THR1155 SER1156 PHE1157 GLU1158 VAL1159 ARG1160 GLN1161 PHE1162 ALA1163 ASN1164 VAL1165 VAL1166 ASN1167 HIS1168 ILE1169 GLY1170 GLY1171 LEU1172 SER1173 ILE1174 LEU1175 ASP1176 PRO1177 ILE1178 PHE1179 ALA1180 VAL1181 LEU1182 SER1183 ASP1184 VAL1185 LEU1186 THR1187 ALA1188 ILE1189 PHE1190 GLN1191 ASP1192 THR1193 VAL1194 ARG1195 ALA1196 GLU1197 MET1198 THR1199 LYS1200 VAL1201 LEU1202 ALA1203 PRO1204 ALA1205 PHE1206 LYS1207 LYS1208 GLU1209 LEU1210 GLU1211 ARG1212 ASN1213 ASN1214
Ligands
Unit 4 GLC1 GLC2
Unit 5 GLC1 GLC2
Unit 6 GLC1 GLC2
Unit 7 NA1216
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany