3H42 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF PCSK9 IN COMPLEX WITH FAB FROM LDLR COM ANTIBODY
• Keywords: HYDROLASE, PROTEIN FAB COMPLEX, AUTOCATALYTIC CLEAVAGE, CHOL METABOLISM, DISEASE MUTATION, DISULFIDE BOND, GLYCOPROTEIN, METABOLISM, PHOSPHOPROTEIN, PROTEASE, SECRETED, SERINE PROT STEROID METABOLISM, ZYMOGEN, HYDROLASE-IMMUNE SYSTEM COMPLE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3H42	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9	A	92	740	0
2	Protein	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9	B	492	3659	0
3	Protein	FAB FROM LDLR COMPETITIVE ANTIBODY: LIGHT CHAIN	L	214	1568	0
4	Protein	FAB FROM LDLR COMPETITIVE ANTIBODY: HEAVY CHAIN	H	221	1660	0
5	Ligand	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9	B	1	0	1
6	Water			568	0	568
total				1588	7627	569

Proteins

Unit 1	THR 61 ALA 62 THR 63 PHE 64 HIS 65 ARG 66 CYS 67 ALA 68 LYS 69 ASP 70 PRO 71 TRP 72 ARG 73 LEU 74 PRO 75 GLY 76 THR 77 TYR 78 VAL 79 VAL 80 VAL 81 LEU 82 LYS 83 GLU 84 GLU 85 THR 86 HIS 87 LEU 88 SER 89 GLN 90 SER 91 GLU 92 ARG 93 THR 94 ALA 95 ARG 96 ARG 97 LEU 98 GLN 99 ALA 100 GLN 101 ALA 102 ALA 103 ARG 104 ARG 105 GLY 106 TYR 107 LEU 108 THR 109 LYS 110 ILE 111 LEU 112 HIS 113 VAL 114 PHE 115 HIS 116 GLY 117 LEU 118 LEU 119 PRO 120 GLY 121 PHE 122 LEU 123 VAL 124 LYS 125 MET 126 SER 127 GLY 128 ASP 129 LEU 130 LEU 131 GLU 132 LEU 133 ALA 134 LEU 135 LYS 136 LEU 137 PRO 138 HIS 139 VAL 140 ASP 141 TYR 142 ILE 143 GLU 144 GLU 145 ASP 146 SER 147 SER 148 VAL 149 PHE 150 ALA 151 GLN 152
Unit 2	SER 153 ILE 154 PRO 155 TRP 156 ASN 157 LEU 158 GLU 159 ARG 160 ILE 161 THR 162 PRO 163 PRO 164 ARG 165 TYR 166 TYR 171 LEU 179 VAL 180 GLU 181 VAL 182 TYR 183 LEU 184 LEU 185 ASP 186 THR 187 SER 188 ILE 189 GLN 190 SER 191 ASP 192 HIS 193 ARG 194 GLU 195 ILE 196 GLU 197 GLY 198 ARG 199 VAL 200 MET 201 VAL 202 THR 203 ASP 204 PHE 205 GLU 206 ASN 207 VAL 208 PRO 209 GLU 210 GLU 211 ASP 212 GLY 213 THR 214 ARG 215 PHE 216 HIS 217 ARG 218 GLN 219 ALA 220 SER 221 LYS 222 CYS 223 ASP 224 SER 225 HIS 226 GLY 227 THR 228 HIS 229 LEU 230 ALA 231 GLY 232 VAL 233 VAL 234 SER 235 GLY 236 ARG 237 ASP 238 ALA 239 GLY 240 VAL 241 ALA 242 LYS 243 GLY 244 ALA 245 SER 246 MET 247 ARG 248 SER 249 LEU 250 ARG 251 VAL 252 LEU 253 ASN 254 CYS 255 GLN 256 GLY 257 LYS 258 GLY 259 THR 260 VAL 261 SER 262 GLY 263 THR 264 LEU 265 ILE 266 GLY 267 LEU 268 GLU 269 PHE 270 ILE 271 ARG 272 LYS 273 SER 274 GLN 275 LEU 276 VAL 277 GLN 278 PRO 279 VAL 280 GLY 281 PRO 282 LEU 283 VAL 284 VAL 285 LEU 286 LEU 287 PRO 288 LEU 289 ALA 290 GLY 291 GLY 292 TYR 293 SER 294 ARG 295 VAL 296 LEU 297 ASN 298 ALA 299 ALA 300 CYS 301 GLN 302 ARG 303 LEU 304 ALA 305 ARG 306 ALA 307 GLY 308 VAL 309 VAL 310 LEU 311 VAL 312 THR 313 ALA 314 ALA 315 GLY 316 ASN 317 PHE 318 ARG 319 ASP 320 ASP 321 ALA 322 CYS 323 LEU 324 TYR 325 SER 326 PRO 327 ALA 328 SER 329 ALA 330 PRO 331 GLU 332 VAL 333 ILE 334 THR 335 VAL 336 GLY 337 ALA 338 THR 339 ASN 340 ALA 341 GLN 342 ASP 343 GLN 344 PRO 345 VAL 346 THR 347 LEU 348 GLY 349 THR 350 LEU 351 GLY 352 THR 353 ASN 354 PHE 355 GLY 356 ARG 357 CYS 358 VAL 359 ASP 360 LEU 361 PHE 362 ALA 363 PRO 364 GLY 365 GLU 366 ASP 367 ILE 368 ILE 369 GLY 370 ALA 371 SER 372 SER 373 ASP 374 CYS 375 SER 376 THR 377 CYS 378 PHE 379 VAL 380 SER 381 GLN 382 SER 383 GLY 384 THR 385 SER 386 GLN 387 ALA 388 ALA 389 ALA 390 HIS 391 VAL 392 ALA 393 GLY 394 ILE 395 ALA 396 ALA 397 MET 398 MET 399 LEU 400 SER 401 ALA 402 GLU 403 PRO 404 GLU 405 LEU 406 THR 407 LEU 408 ALA 409 GLU 410 LEU 411 ARG 412 GLN 413 ARG 414 LEU 415 ILE 416 HIS 417 PHE 418 SER 419 ALA 420 LYS 421 ASP 422 VAL 423 ILE 424 ASN 425 GLU 426 ALA 427 TRP 428 PHE 429 PRO 430 GLU 431 ASP 432 GLN 433 ARG 434 VAL 435 LEU 436 THR 437 PRO 438 ASN 439 LEU 440 VAL 441 ALA 442 ALA 443 LEU 444 PRO 445 PRO 446 SER 447 THR 448 HIS 449 TRP 453 GLN 454 LEU 455 PHE 456 CYS 457 ARG 458 THR 459 VAL 460 TRP 461 SER 462 ALA 463 HIS 464 SER 465 GLY 466 PRO 467 THR 468 ARG 469 MET 470 ALA 471 THR 472 ALA 473 ILE 474 ALA 475 ARG 476 CYS 477 ALA 478 PRO 479 ASP 480 GLU 481 GLU 482 LEU 483 LEU 484 SER 485 CYS 486 SER 487 SER 488 PHE 489 SER 490 ARG 491 SER 492 GLY 493 LYS 494 ARG 495 ARG 496 GLY 497 GLU 498 ARG 499 MET 500 GLU 501 ALA 502 GLN 503 GLY 504 GLY 505 LYS 506 LEU 507 VAL 508 CYS 509 ARG 510 ALA 511 HIS 512 ASN 513 ALA 514 PHE 515 GLY 516 GLY 517 GLU 518 GLY 519 VAL 520 TYR 521 ALA 522 ILE 523 ALA 524 ARG 525 CYS 526 CYS 527 LEU 528 LEU 529 PRO 530 GLN 531 ALA 532 ALA 533 CYS 534 SER 535 VAL 536 HIS 537 THR 538 ALA 539 PRO 540 PRO 541 ALA 542 GLU 543 ALA 544 SER 545 MET 546 GLY 547 THR 548 ARG 549 VAL 550 HIS 551 CYS 552 HIS 553 GLN 554 GLN 555 GLY 556 HIS 557 VAL 558 LEU 559 THR 560 GLY 561 CYS 562 SER 563 SER 564 HIS 565 TRP 566 GLU 567 VAL 568 GLU 569 ASP 570 LEU 571 PRO 585 ASN 586 GLN 587 CYS 588 VAL 589 GLY 590 HIS 591 ARG 592 GLU 593 ALA 594 SER 595 ILE 596 HIS 597 ALA 598 SER 599 CYS 600 CYS 601 HIS 602 ALA 603 PRO 604 GLY 605 LEU 606 GLU 607 CYS 608 LYS 609 VAL 610 LYS 611 GLU 612 HIS 613 GLY 614 ILE 615 PRO 616 ALA 617 PRO 618 GLN 619 GLY 620 GLN 621 VAL 622 THR 623 VAL 624 ALA 625 CYS 626 GLU 627 GLU 628 GLY 629 TRP 630 THR 631 LEU 632 THR 633 GLY 634 CYS 635 SER 636 ALA 637 LEU 638 PRO 639 GLY 640 THR 641 SER 642 HIS 643 VAL 644 LEU 645 GLY 646 ALA 647 TYR 648 ALA 649 VAL 650 ASP 651 ASN 652 THR 653 CYS 654 VAL 655 VAL 656 ARG 657 SER 658 ARG 659 ALA 671 VAL 672 THR 673 ALA 674 VAL 675 ALA 676 ILE 677 CYS 678 CYS 679 ARG 680 SER 681 ARG 682
Unit 3	GLU 1 SER 2 VAL 3 LEU 4 THR 5 GLN 6 PRO 7 PRO 8 SER 9 VAL 10 SER 11 GLY 12 ALA 13 PRO 14 GLY 15 GLN 16 ARG 17 VAL 18 THR 19 ILE 20 SER 21 CYS 22 THR 23 GLY 24 SER 25 SER 26 SER 27 ASN 28 ILE 29 GLY 30 ALA 31 GLY 32 TYR 33 ASP 34 VAL 35 HIS 36 TRP 37 TYR 38 GLN 39 GLN 40 LEU 41 PRO 42 GLY 43 THR 44 ALA 45 PRO 46 LYS 47 LEU 48 LEU 49 ILE 50 SER 51 GLY 52 ASN 53 SER 54 ASN 55 ARG 56 PRO 57 SER 58 GLY 59 VAL 60 PRO 61 ASP 62 ARG 63 PHE 64 SER 65 GLY 66 SER 67 LYS 68 SER 69 GLY 70 THR 71 SER 72 ALA 73 SER 74 LEU 75 ALA 76 ILE 77 THR 78 GLY 79 LEU 80 GLN 81 ALA 82 GLU 83 ASP 84 GLU 85 ALA 86 ASP 87 TYR 88 TYR 89 CYS 90 GLN 91 SER 92 TYR 93 ASP 94 SER 95 SER 96 LEU 97 SER 98 GLY 99 SER 100 VAL 101 PHE 102 GLY 103 GLY 104 GLY 105 THR 106 LYS 107 LEU 108 THR 109 VAL 110 LEU 111 GLY 112 GLN 113 PRO 114 LYS 115 ALA 116 ALA 117 PRO 118 SER 119 VAL 120 THR 121 LEU 122 PHE 123 PRO 124 PRO 125 SER 126 SER 127 GLU 128 GLU 129 LEU 130 GLN 131 ALA 132 ASN 133 LYS 134 ALA 135 THR 136 LEU 137 VAL 138 CYS 139 LEU 140 ILE 141 SER 142 ASP 143 PHE 144 TYR 145 PRO 146 GLY 147 ALA 148 VAL 149 THR 150 VAL 151 ALA 152 TRP 153 LYS 154 ALA 155 ASP 156 SER 157 SER 158 PRO 159 VAL 160 LYS 161 ALA 162 GLY 163 VAL 164 GLU 165 THR 166 THR 167 THR 168 PRO 169 SER 170 LYS 171 GLN 172 SER 173 ASN 174 ASN 175 LYS 176 TYR 177 ALA 178 ALA 179 SER 180 SER 181 TYR 182 LEU 183 SER 184 LEU 185 THR 186 PRO 187 GLU 188 GLN 189 TRP 190 LYS 191 SER 192 HIS 193 ARG 194 SER 195 TYR 196 SER 197 CYS 198 GLN 199 VAL 200 THR 201 HIS 202 GLU 203 GLY 204 SER 205 THR 206 VAL 207 GLU 208 LYS 209 THR 210 VAL 211 ALA 212 PRO 213 THR 214
Unit 4	GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 LYS 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 SER 31 TYR 32 SER 33 MET 34 ASN 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 SER 50 ILE 51 SER 52 SER 53 SER 54 SER 55 SER 56 TYR 57 ILE 58 SER 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 ALA 75 LYS 76 ASN 77 SER 78 LEU 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 ALA 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 PHE 95 CYS 96 ALA 97 ARG 98 ASP 99 TYR 100 ASP 101 PHE 102 TRP 103 SER 104 ALA 105 TYR 106 TYR 107 ASP 108 ALA 109 PHE 110 ASP 111 VAL 112 TRP 113 GLY 114 GLN 115 GLY 116 THR 117 MET 118 VAL 119 THR 120 VAL 121 SER 122 SER 123 ALA 124 SER 125 THR 126 LYS 127 GLY 128 PRO 129 SER 130 VAL 131 PHE 132 PRO 133 LEU 134 ALA 135 PRO 136 SER 137 SER 138 LYS 139 GLY 143 GLY 144 THR 145 ALA 146 ALA 147 LEU 148 GLY 149 CYS 150 LEU 151 VAL 152 LYS 153 ASP 154 TYR 155 PHE 156 PRO 157 GLU 158 PRO 159 VAL 160 THR 161 VAL 162 SER 163 TRP 164 ASN 165 SER 166 GLY 167 ALA 168 LEU 169 THR 170 SER 171 GLY 172 VAL 173 HIS 174 THR 175 PHE 176 PRO 177 ALA 178 VAL 179 LEU 180 GLN 181 SER 182 SER 183 GLY 184 LEU 185 TYR 186 SER 187 LEU 188 SER 189 SER 190 VAL 191 VAL 192 THR 193 VAL 194 PRO 195 SER 196 SER 197 SER 198 LEU 199 GLY 200 THR 201 GLN 202 THR 203 TYR 204 ILE 205 CYS 206 ASN 207 VAL 208 ASN 209 HIS 210 LYS 211 PRO 212 SER 213 ASN 214 THR 215 LYS 216 VAL 217 ASP 218 LYS 219 LYS 220 VAL 221 GLU 222 PRO 223 LYS 224

Ligands

Unit 5

NA 1