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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE SINGLE-CHAIN FV (SCFV) FRAGMENT OF ERBB2 ANTIBODY CHA21 IN COMPLEX WITH RESIDUES 1-192 OF ERBB EXTRACELLULAR DOMAIN
Keywords IMMUNOGLOBULIN, BETA-HELIX, PROTEIN-PROTEIN COMPLEX, ATP-BIN DISULFIDE BOND, KINASE, NUCLEOTIDE-BINDING, RECEPTOR, TRANS TRANSMEMBRANE, TYROSINE-PROTEIN KINASE, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3H3B     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RECEPTOR TYROSINE-PROTEIN KINASE ERBB-2  A 193 1510 0
2  Protein   RECEPTOR TYROSINE-PROTEIN KINASE ERBB-2  B 189 1485 0
3  Protein   ANTI-ERBB2 ANTIBODY CHA21  C 234 1816 0
4  Protein   ANTI-ERBB2 ANTIBODY CHA21  D 236 1831 0
5 Water     239 0 239
total       1091 6642 239

Proteins
Unit 1 SER0 THR1 GLN2 VAL3 CYS4 THR5 GLY6 THR7 ASP8 MET9 LYS10 LEU11 ARG12 LEU13 PRO14 ALA15 SER16 PRO17 GLU18 THR19 HIS20 LEU21 ASP22 MET23 LEU24 ARG25 HIS26 LEU27 TYR28 GLN29 GLY30 CYS31 GLN32 VAL33 VAL34 GLN35 GLY36 ASN37 LEU38 GLU39 LEU40 THR41 TYR42 LEU43 PRO44 THR45 ASN46 ALA47 SER48 LEU49 SER50 PHE51 LEU52 GLN53 ASP54 ILE55 GLN56 GLU57 VAL58 GLN59 GLY60 TYR61 VAL62 LEU63 ILE64 ALA65 HIS66 ASN67 GLN68 VAL69 ARG70 GLN71 VAL72 PRO73 LEU74 GLN75 ARG76 LEU77 ARG78 ILE79 VAL80 ARG81 GLY82 THR83 GLN84 LEU85 PHE86 GLU87 ASP88 ASN89 TYR90 ALA91 LEU92 ALA93 VAL94 LEU95 ASP96 ASN97 GLY98 ASP99 PRO100 LEU101 ASN102 ASN103 THR104 THR105 PRO106 VAL107 THR108 GLY109 ALA110 SER111 PRO112 GLY113 GLY114 LEU115 ARG116 GLU117 LEU118 GLN119 LEU120 ARG121 SER122 LEU123 THR124 GLU125 ILE126 LEU127 LYS128 GLY129 GLY130 VAL131 LEU132 ILE133 GLN134 ARG135 ASN136 PRO137 GLN138 LEU139 CYS140 TYR141 GLN142 ASP143 THR144 ILE145 LEU146 TRP147 LYS148 ASP149 ILE150 PHE151 HIS152 LYS153 ASN154 ASN155 GLN156 LEU157 ALA158 LEU159 THR160 LEU161 ILE162 ASP163 THR164 ASN165 ARG166 SER167 ARG168 ALA169 CYS170 HIS171 PRO172 CYS173 SER174 PRO175 MET176 CYS177 LYS178 GLY179 SER180 ARG181 CYS182 TRP183 GLY184 GLU185 SER186 SER187 GLU188 ASP189 CYS190 GLN191 SER192
Unit 2 SER0 THR1 GLN2 VAL3 CYS4 THR5 GLY6 THR7 ASP8 MET9 LYS10 LEU11 ARG12 LEU13 PRO14 ALA15 SER16 PRO17 GLU18 THR19 HIS20 LEU21 ASP22 MET23 LEU24 ARG25 HIS26 LEU27 TYR28 GLN29 GLY30 CYS31 GLN32 VAL33 VAL34 GLN35 GLY36 ASN37 LEU38 GLU39 LEU40 THR41 TYR42 LEU43 PRO44 THR45 ASN46 ALA47 SER48 LEU49 SER50 PHE51 LEU52 GLN53 ASP54 ILE55 GLN56 GLU57 VAL58 GLN59 GLY60 TYR61 VAL62 LEU63 ILE64 ALA65 HIS66 ASN67 GLN68 VAL69 ARG70 GLN71 VAL72 PRO73 LEU74 GLN75 ARG76 LEU77 ARG78 ILE79 VAL80 ARG81 GLY82 THR83 GLN84 LEU85 PHE86 GLU87 ASP88 ASN89 TYR90 ALA91 LEU92 ALA93 VAL94 LEU95 ASP96 ASN97 GLY98 ASP99 PRO100 LEU101 ASN102 ASN103 THR104 THR105 PRO106 VAL107 THR108 GLY109 ALA110 SER111 PRO112 GLY113 GLY114 LEU115 ARG116 GLU117 LEU118 GLN119 LEU120 ARG121 SER122 LEU123 THR124 GLU125 ILE126 LEU127 LYS128 GLY129 GLY130 VAL131 LEU132 ILE133 GLN134 ARG135 ASN136 PRO137 GLN138 LEU139 CYS140 TYR141 GLN142 ASP143 THR144 ILE145 LEU146 TRP147 LYS148 ASP149 ILE150 PHE151 HIS152 LYS153 ASN154 ASN155 GLN156 LEU157 ALA158 LEU159 THR160 LEU161 ILE162 ASP163 THR164 ASN165 ARG166 SER167 ARG168 ALA169 CYS170 HIS171 PRO172 CYS173 SER174 PRO175 MET176 CYS177 ARG181 CYS182 TRP183 GLY184 GLU185 SER186 SER187 GLU188 ASP189 CYS190 GLN191
Unit 3 GLN-2 PRO-1 ALA0 ASP1 ILE2 VAL3 LEU4 THR5 GLN6 THR7 PRO8 SER9 SER10 LEU11 PRO12 VAL13 SER14 VAL15 GLY16 GLU17 LYS18 VAL19 THR20 MET21 THR22 CYS23 LYS24 SER25 SER26 GLN27 THR28 LEU29 LEU30 TYR31 SER32 ASN33 ASN34 GLN35 LYS36 ASN37 TYR38 LEU39 ALA40 TRP41 TYR42 GLN43 GLN44 LYS45 PRO46 GLY47 GLN48 SER49 PRO50 LYS51 LEU52 LEU53 ILE54 SER55 TRP56 ALA57 PHE58 THR59 ARG60 LYS61 SER62 GLY63 VAL64 PRO65 ASP66 ARG67 PHE68 THR69 GLY70 SER71 GLY72 SER73 GLY74 THR75 ASP76 PHE77 THR78 LEU79 THR80 ILE81 GLY82 SER83 VAL84 LYS85 ALA86 GLU87 ASP88 LEU89 ALA90 VAL91 TYR92 TYR93 CYS94 GLN95 GLN96 TYR97 SER98 ASN99 TYR100 PRO101 TRP102 THR103 PHE104 GLY105 GLY106 GLY107 THR108 ARG109 LEU110 GLU111 ILE112 GLU135 VAL136 GLN137 LEU138 GLN139 GLN140 SER141 GLY142 PRO143 GLU144 VAL145 VAL146 LYS147 THR148 GLY149 ALA150 SER151 VAL152 LYS153 ILE154 SER155 CYS156 LYS157 ALA158 SER159 GLY160 TYR161 SER162 PHE163 THR164 GLY165 TYR166 PHE167 ILE168 ASN169 TRP170 VAL171 LYS172 LYS173 ASN174 SER175 GLY176 LYS177 SER178 PRO179 GLU180 TRP181 ILE182 GLY183 HIS184 ILE185 SER186 SER187 SER188 TYR189 ALA190 THR191 SER192 THR193 TYR194 ASN195 GLN196 LYS197 PHE198 LYS199 ASN200 LYS201 ALA202 ALA203 PHE204 THR205 VAL206 ASP207 THR208 SER209 SER210 SER211 THR212 ALA213 PHE214 MET215 GLN216 LEU217 ASN218 SER219 LEU220 THR221 SER222 GLU223 ASP224 SER225 ALA226 VAL227 TYR228 TYR229 CYS230 VAL231 ARG232 SER233 GLY234 ASN235 TYR236 GLU237 GLU238 TYR239 ALA240 MET241 ASP242 TYR243 TRP244 GLY245 GLN246 GLY247 THR248 SER249 VAL250 THR251 VAL252 SER253
Unit 4 GLN-2 PRO-1 ALA0 ASP1 ILE2 VAL3 LEU4 THR5 GLN6 THR7 PRO8 SER9 SER10 LEU11 PRO12 VAL13 SER14 VAL15 GLY16 GLU17 LYS18 VAL19 THR20 MET21 THR22 CYS23 LYS24 SER25 SER26 GLN27 THR28 LEU29 LEU30 TYR31 SER32 ASN33 ASN34 GLN35 LYS36 ASN37 TYR38 LEU39 ALA40 TRP41 TYR42 GLN43 GLN44 LYS45 PRO46 GLY47 GLN48 SER49 PRO50 LYS51 LEU52 LEU53 ILE54 SER55 TRP56 ALA57 PHE58 THR59 ARG60 LYS61 SER62 GLY63 VAL64 PRO65 ASP66 ARG67 PHE68 THR69 GLY70 SER71 GLY72 SER73 GLY74 THR75 ASP76 PHE77 THR78 LEU79 THR80 ILE81 GLY82 SER83 VAL84 LYS85 ALA86 GLU87 ASP88 LEU89 ALA90 VAL91 TYR92 TYR93 CYS94 GLN95 GLN96 TYR97 SER98 ASN99 TYR100 PRO101 TRP102 THR103 PHE104 GLY105 GLY106 GLY107 THR108 ARG109 LEU110 GLU111 ILE112 LYS113 SER134 GLU135 VAL136 GLN137 LEU138 GLN139 GLN140 SER141 GLY142 PRO143 GLU144 VAL145 VAL146 LYS147 THR148 GLY149 ALA150 SER151 VAL152 LYS153 ILE154 SER155 CYS156 LYS157 ALA158 SER159 GLY160 TYR161 SER162 PHE163 THR164 GLY165 TYR166 PHE167 ILE168 ASN169 TRP170 VAL171 LYS172 LYS173 ASN174 SER175 GLY176 LYS177 SER178 PRO179 GLU180 TRP181 ILE182 GLY183 HIS184 ILE185 SER186 SER187 SER188 TYR189 ALA190 THR191 SER192 THR193 TYR194 ASN195 GLN196 LYS197 PHE198 LYS199 ASN200 LYS201 ALA202 ALA203 PHE204 THR205 VAL206 ASP207 THR208 SER209 SER210 SER211 THR212 ALA213 PHE214 MET215 GLN216 LEU217 ASN218 SER219 LEU220 THR221 SER222 GLU223 ASP224 SER225 ALA226 VAL227 TYR228 TYR229 CYS230 VAL231 ARG232 SER233 GLY234 ASN235 TYR236 GLU237 GLU238 TYR239 ALA240 MET241 ASP242 TYR243 TRP244 GLY245 GLN246 GLY247 THR248 SER249 VAL250 THR251 VAL252 SER253

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany