3GZY - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE BIPHENYL DIOXYGENASE FROM COMAMONAS TESTOSTERONI SP. STRAIN B-356
• Keywords: DIOXYGENASE, RIESKIE, NON-HEME IRON, AROMATIC HYDROCARBONS CATABOLISM, IRON, IRON-SULFUR, METAL-BINDING, NAD, OXIDORED
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3GZY	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	BIPHENYL DIOXYGENASE SUBUNIT ALPHA	A	440	3498	0
2	Protein	BIPHENYL DIOXYGENASE SUBUNIT BETA	B	186	1525	0
3	Ligand	BIPHENYL DIOXYGENASE SUBUNIT ALPHA	A	2	0	5
4	Ligand	BIPHENYL DIOXYGENASE SUBUNIT BETA	B	1	0	12
5	Water			580	0	580
total				1209	5023	597

Proteins

Unit 1

ASN 18 TRP 19 THR 20 PRO 21 ASP 22 ALA 23 ILE 24 ARG 25 ALA 26 LEU 27 VAL 28 ASP 29 GLN 30 ASP 31 ASN 32 GLY 33 LYS 34 LEU 35 ASP 36 ALA 37 ARG 38 ILE 39 TYR 40 ALA 41 ASP 42 GLN 43 ASP 44 LEU 45 TYR 46 GLN 47 LEU 48 GLU 49 LEU 50 GLU 51 ARG 52 VAL 53 PHE 54 GLY 55 ARG 56 SER 57 TRP 58 LEU 59 MET 60 LEU 61 GLY 62 HIS 63 GLU 64 THR 65 HIS 66 ILE 67 PRO 68 LYS 69 ILE 70 GLY 71 ASP 72 TYR 73 LEU 74 THR 75 THR 76 TYR 77 MET 78 GLY 79 GLU 80 ASP 81 PRO 82 VAL 83 ILE 84 MET 85 VAL 86 ARG 87 GLN 88 LYS 89 ASP 90 GLN 91 SER 92 ILE 93 LYS 94 VAL 95 PHE 96 LEU 97 ASN 98 GLN 99 CYS 100 ARG 101 HIS 102 ARG 103 GLY 104 MET 105 ARG 106 ILE 107 VAL 108 ARG 109 SER 110 ASP 111 GLY 112 GLY 113 ASN 114 ALA 115 LYS 116 ALA 117 PHE 118 THR 119 CYS 120 THR 121 TYR 122 HIS 123 GLY 124 TRP 125 ALA 126 TYR 127 ASP 128 ILE 129 ALA 130 GLY 131 ASN 132 LEU 133 VAL 134 ASN 135 VAL 136 PRO 137 PHE 138 GLU 139 LYS 140 GLU 141 ALA 142 PHE 143 CYS 144 ASP 145 LYS 146 LYS 147 GLU 148 GLY 149 ASP 150 CYS 151 GLY 152 PHE 153 ASP 154 LYS 155 ALA 156 ASP 157 TRP 158 GLY 159 PRO 160 LEU 161 GLN 162 ALA 163 ARG 164 VAL 165 GLU 166 THR 167 TYR 168 LYS 169 GLY 170 LEU 171 VAL 172 PHE 173 ALA 174 ASN 175 TRP 176 ASP 177 PRO 178 GLU 179 ALA 180 PRO 181 ASP 182 LEU 183 LYS 184 THR 185 TYR 186 LEU 187 SER 188 ASP 189 ALA 190 MET 191 PRO 192 TYR 193 MET 194 ASP 195 VAL 196 MET 197 LEU 198 ASP 199 ARG 200 THR 201 GLU 202 ALA 203 GLY 204 THR 205 GLU 206 ALA 207 ILE 208 GLY 209 GLY 210 ILE 211 GLN 212 LYS 213 TRP 214 VAL 215 ILE 216 PRO 217 CYS 218 ASN 219 TRP 220 LYS 221 PHE 222 ALA 223 ALA 224 GLU 225 GLN 226 PHE 227 CYS 228 SER 229 ASP 230 MET 231 TYR 232 HIS 233 ALA 234 GLY 235 THR 236 MET 237 SER 238 HIS 239 LEU 240 SER 241 GLY 242 VAL 243 LEU 244 ALA 245 GLY 246 LEU 247 PRO 248 PRO 249 GLU 250 MET 251 ASP 252 LEU 253 THR 254 GLN 255 ILE 256 GLN 257 LEU 258 SER 259 LYS 260 ASN 261 GLY 262 ASN 263 GLN 264 PHE 265 ARG 266 SER 267 ALA 268 TRP 269 GLY 270 GLY 271 HIS 272 GLY 273 ALA 274 GLY 275 TRP 276 PHE 277 ILE 278 ASN 279 ASP 280 SER 281 SER 282 ILE 283 LEU 284 LEU 285 SER 286 VAL 287 VAL 288 GLY 289 PRO 290 LYS 291 ILE 292 THR 293 GLN 294 TYR 295 TRP 296 THR 297 GLN 298 GLY 299 PRO 300 ALA 301 ALA 302 GLU 303 LYS 304 ALA 305 ALA 306 ARG 307 ARG 308 VAL 309 PRO 310 GLN 311 LEU 312 PRO 313 ILE 314 LEU 315 ASP 316 MET 317 PHE 318 GLY 319 GLN 320 HIS 321 MET 322 THR 323 VAL 324 PHE 325 PRO 326 THR 327 CYS 328 SER 329 PHE 330 LEU 331 PRO 332 GLY 333 ILE 334 ASN 335 THR 336 ILE 337 ARG 338 THR 339 TRP 340 HIS 341 PRO 342 ARG 343 GLY 344 PRO 345 ASN 346 GLU 347 VAL 348 GLU 349 VAL 350 TRP 351 ALA 352 PHE 353 VAL 354 LEU 355 VAL 356 ASP 357 ALA 358 ASP 359 ALA 360 PRO 361 GLU 362 ASP 363 ILE 364 LYS 365 GLU 366 GLU 367 PHE 368 ARG 369 LEU 370 GLN 371 ASN 372 ILE 373 ARG 374 THR 375 PHE 376 ASN 377 ALA 378 GLY 379 GLY 380 VAL 381 PHE 382 GLU 383 GLN 384 ASP 385 ASP 386 GLY 387 GLU 388 ASN 389 TRP 390 VAL 391 GLU 392 ILE 393 GLN 394 ARG 395 VAL 396 MET 397 ARG 398 GLY 399 HIS 400 LYS 401 ALA 402 LYS 403 SER 404 THR 405 SER 406 LEU 407 CYS 408 ALA 409 LYS 410 MET 411 GLY 412 LEU 413 ASN 414 VAL 415 PRO 416 ASN 417 LYS 418 ASN 419 ASN 420 PRO 421 ALA 422 TYR 423 PRO 424 GLY 425 LYS 426 THR 427 ALA 428 TYR 429 VAL 430 TYR 431 ALA 432 GLU 433 GLU 434 ALA 435 ALA 436 ARG 437 GLY 438 MET 439 TYR 440 HIS 441 HIS 442 TRP 443 SER 444 ARG 445 MET 446 MET 447 SER 448 GLU 449 PRO 450 SER 451 TRP 452 ASP 453 THR 454 LEU 455 LYS 456 PRO 457

Unit 2

MET 1 ILE 2 SER 3 THR 4 PRO 5 LEU 6 SER 7 LYS 8 GLU 9 PHE 10 GLU 11 TRP 12 PRO 13 ALA 14 LYS 15 PRO 16 VAL 17 SER 18 LEU 19 GLU 20 LEU 21 GLN 22 HIS 23 GLN 24 VAL 25 GLU 26 GLN 27 PHE 28 TYR 29 TYR 30 ARG 31 GLU 32 ALA 33 GLN 34 LEU 35 LEU 36 ASP 37 HIS 38 HIS 39 ALA 40 PHE 41 GLN 42 ALA 43 TRP 44 PHE 45 ALA 46 LEU 47 LEU 48 ALA 49 GLU 50 ASP 51 ILE 52 HIS 53 TYR 54 TRP 55 MET 56 PRO 57 ILE 58 ARG 59 THR 60 VAL 61 ARG 62 THR 63 ALA 64 ARG 65 GLU 66 GLN 67 GLY 68 LEU 69 GLU 70 TYR 71 VAL 72 PRO 73 ALA 74 GLY 75 ALA 76 ASN 77 ALA 78 HIS 79 PHE 80 ASP 81 ASP 82 THR 83 HIS 84 ALA 85 THR 86 MET 87 TYR 88 GLY 89 ARG 90 ILE 91 ARG 92 GLN 93 LYS 94 THR 95 SER 96 ASP 97 LEU 98 ASN 99 TRP 100 ALA 101 GLU 102 ASP 103 PRO 104 PRO 105 SER 106 ARG 107 THR 108 ARG 109 HIS 110 LEU 111 VAL 112 SER 113 ASN 114 VAL 115 ILE 116 VAL 117 ARG 118 GLU 119 MET 120 ASP 121 THR 122 PRO 123 GLY 124 THR 125 LEU 126 GLU 127 VAL 128 ALA 129 SER 130 ALA 131 PHE 132 LEU 133 LEU 134 TYR 135 ARG 136 SER 137 ARG 138 LEU 139 GLU 140 ARG 141 GLN 142 VAL 143 ASP 144 VAL 145 PHE 146 ALA 147 GLY 148 GLU 149 ARG 150 ARG 151 ASP 152 VAL 153 LEU 154 ARG 155 ILE 156 ALA 157 ASP 158 ASN 159 PRO 160 LEU 161 GLY 162 PHE 163 GLN 164 ILE 165 ALA 166 LYS 167 ARG 168 THR 169 ILE 170 ILE 171 LEU 172 ASP 173 GLN 174 SER 175 THR 176 VAL 177 LEU 178 ALA 179 ASN 180 ASN 181 LEU 182 SER 183 VAL 184 PHE 185 PHE 186

Ligands

Unit 3	FES 700 FE2 701
Unit 4	MES 702