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Sequence, Chains, Asymmetric and Biological Units

Title COCRYSTAL STRUCTURE OF NUDIX DOMAIN OF SHEWANELLA ONEIDENSIS COMPLEXED WITH ADP RIBOSE
Keywords DNA BINDING PROTEIN, NUDIX DOMAIN, WHTH DOMAIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3GZ8     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MUTT/NUDIX FAMILY PROTEIN  A 154 1228 0
2  Protein   MUTT/NUDIX FAMILY PROTEIN  B 154 1228 0
3  Protein   MUTT/NUDIX FAMILY PROTEIN  C 156 1247 0
4  Protein   MUTT/NUDIX FAMILY PROTEIN  D 154 1228 0
5  Ligand   MUTT/NUDIX FAMILY PROTEIN  A 1 0 36
6  Ligand   MUTT/NUDIX FAMILY PROTEIN  B 1 0 36
7  Ligand   MUTT/NUDIX FAMILY PROTEIN  C 1 0 36
8  Ligand   MUTT/NUDIX FAMILY PROTEIN  D 1 0 36
9 Water     302 0 302
total       924 4931 446

Proteins
Unit 1 MET1 THR2 GLU3 ALA4 GLU5 TYR6 LEU7 ALA8 ASN9 TYR10 ASP11 PRO12 LYS13 ALA14 PHE15 LYS16 ALA17 GLN18 LEU19 LEU20 THR21 VAL22 ASP23 ALA24 VAL25 LEU26 PHE27 THR28 TYR29 HIS30 ASP31 GLN32 GLN33 LEU34 LYS35 VAL36 LEU37 LEU38 VAL39 GLN40 ARG41 SER42 ASN43 HIS44 PRO45 PHE46 LEU47 GLY48 LEU49 TRP50 GLY51 LEU52 PRO53 GLY54 GLY55 PHE56 ILE57 ASP58 GLU59 THR60 CYS61 ASP62 GLU63 SER64 LEU65 GLU66 GLN67 THR68 VAL69 LEU70 ARG71 LYS72 LEU73 ALA74 GLU75 LYS76 THR77 ALA78 VAL79 VAL80 PRO81 PRO82 TYR83 ILE84 GLU85 GLN86 LEU87 CYS88 THR89 VAL90 GLY91 ASN92 ASN93 SER94 ARG95 ASP96 ALA97 ARG98 GLY99 TRP100 SER101 VAL102 THR103 VAL104 CYS105 TYR106 THR107 ALA108 LEU109 MET110 SER111 TYR112 GLN113 ALA114 CYS115 GLN116 ILE117 GLN118 ILE119 ALA120 SER121 VAL122 SER123 ASP124 VAL125 LYS126 TRP127 TRP128 PRO129 LEU130 ALA131 ASP132 VAL133 LEU134 GLN135 MET136 PRO137 LEU138 ALA139 PHE140 ASP141 HIS142 LEU143 GLN144 LEU145 ILE146 GLU147 GLN148 ALA149 ARG150 GLU151 ARG152 LEU153 THR154
Unit 2 MET1 THR2 GLU3 ALA4 GLU5 TYR6 LEU7 ALA8 ASN9 TYR10 ASP11 PRO12 LYS13 ALA14 PHE15 LYS16 ALA17 GLN18 LEU19 LEU20 THR21 VAL22 ASP23 ALA24 VAL25 LEU26 PHE27 THR28 TYR29 HIS30 ASP31 GLN32 GLN33 LEU34 LYS35 VAL36 LEU37 LEU38 VAL39 GLN40 ARG41 SER42 ASN43 HIS44 PRO45 PHE46 LEU47 GLY48 LEU49 TRP50 GLY51 LEU52 PRO53 GLY54 GLY55 PHE56 ILE57 ASP58 GLU59 THR60 CYS61 ASP62 GLU63 SER64 LEU65 GLU66 GLN67 THR68 VAL69 LEU70 ARG71 LYS72 LEU73 ALA74 GLU75 LYS76 THR77 ALA78 VAL79 VAL80 PRO81 PRO82 TYR83 ILE84 GLU85 GLN86 LEU87 CYS88 THR89 VAL90 GLY91 ASN92 ASN93 SER94 ARG95 ASP96 ALA97 ARG98 GLY99 TRP100 SER101 VAL102 THR103 VAL104 CYS105 TYR106 THR107 ALA108 LEU109 MET110 SER111 TYR112 GLN113 ALA114 CYS115 GLN116 ILE117 GLN118 ILE119 ALA120 SER121 VAL122 SER123 ASP124 VAL125 LYS126 TRP127 TRP128 PRO129 LEU130 ALA131 ASP132 VAL133 LEU134 GLN135 MET136 PRO137 LEU138 ALA139 PHE140 ASP141 HIS142 LEU143 GLN144 LEU145 ILE146 GLU147 GLN148 ALA149 ARG150 GLU151 ARG152 LEU153 THR154
Unit 3 HIS0 MET1 THR2 GLU3 ALA4 GLU5 TYR6 LEU7 ALA8 ASN9 TYR10 ASP11 PRO12 LYS13 ALA14 PHE15 LYS16 ALA17 GLN18 LEU19 LEU20 THR21 VAL22 ASP23 ALA24 VAL25 LEU26 PHE27 THR28 TYR29 HIS30 ASP31 GLN32 GLN33 LEU34 LYS35 VAL36 LEU37 LEU38 VAL39 GLN40 ARG41 SER42 ASN43 HIS44 PRO45 PHE46 LEU47 GLY48 LEU49 TRP50 GLY51 LEU52 PRO53 GLY54 GLY55 PHE56 ILE57 ASP58 GLU59 THR60 CYS61 ASP62 GLU63 SER64 LEU65 GLU66 GLN67 THR68 VAL69 LEU70 ARG71 LYS72 LEU73 ALA74 GLU75 LYS76 THR77 ALA78 VAL79 VAL80 PRO81 PRO82 TYR83 ILE84 GLU85 GLN86 LEU87 CYS88 THR89 VAL90 GLY91 ASN92 ASN93 SER94 ARG95 ASP96 ALA97 ARG98 GLY99 TRP100 SER101 VAL102 THR103 VAL104 CYS105 TYR106 THR107 ALA108 LEU109 MET110 SER111 TYR112 GLN113 ALA114 CYS115 GLN116 ILE117 GLN118 ILE119 ALA120 SER121 VAL122 SER123 ASP124 VAL125 LYS126 TRP127 TRP128 PRO129 LEU130 ALA131 ASP132 VAL133 LEU134 GLN135 MET136 PRO137 LEU138 ALA139 PHE140 ASP141 HIS142 LEU143 GLN144 LEU145 ILE146 GLU147 GLN148 ALA149 ARG150 GLU151 ARG152 LEU153 THR154 GLN155
Unit 4 MET1 THR2 GLU3 ALA4 GLU5 TYR6 LEU7 ALA8 ASN9 TYR10 ASP11 PRO12 LYS13 ALA14 PHE15 LYS16 ALA17 GLN18 LEU19 LEU20 THR21 VAL22 ASP23 ALA24 VAL25 LEU26 PHE27 THR28 TYR29 HIS30 ASP31 GLN32 GLN33 LEU34 LYS35 VAL36 LEU37 LEU38 VAL39 GLN40 ARG41 SER42 ASN43 HIS44 PRO45 PHE46 LEU47 GLY48 LEU49 TRP50 GLY51 LEU52 PRO53 GLY54 GLY55 PHE56 ILE57 ASP58 GLU59 THR60 CYS61 ASP62 GLU63 SER64 LEU65 GLU66 GLN67 THR68 VAL69 LEU70 ARG71 LYS72 LEU73 ALA74 GLU75 LYS76 THR77 ALA78 VAL79 VAL80 PRO81 PRO82 TYR83 ILE84 GLU85 GLN86 LEU87 CYS88 THR89 VAL90 GLY91 ASN92 ASN93 SER94 ARG95 ASP96 ALA97 ARG98 GLY99 TRP100 SER101 VAL102 THR103 VAL104 CYS105 TYR106 THR107 ALA108 LEU109 MET110 SER111 TYR112 GLN113 ALA114 CYS115 GLN116 ILE117 GLN118 ILE119 ALA120 SER121 VAL122 SER123 ASP124 VAL125 LYS126 TRP127 TRP128 PRO129 LEU130 ALA131 ASP132 VAL133 LEU134 GLN135 MET136 PRO137 LEU138 ALA139 PHE140 ASP141 HIS142 LEU143 GLN144 LEU145 ILE146 GLU147 GLN148 ALA149 ARG150 GLU151 ARG152 LEU153 THR154

Ligands
Unit 5 APR302
Unit 6 APR302
Unit 7 APR302
Unit 8 APR302

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany