3GXR - Sequence, Chains, Asymmetric and Biological Units

• Title: THE CRYSTAL STRUCTURE OF G-TYPE LYSOZYME FROM ATLANTIC COD ( MORHUA L.) IN COMPLEX WITH NAG OLIGOMERS SHEDS NEW LIGHT ON BINDING AND THE CATALYTIC MECHANISM. STRUCTURE WITH NAG TO
• Keywords: ATLANTIC COD, FISH LYSOZYME, ACTIVE SITE RESIDUES, SUBSTRATE SITES, SURFACE POTENTIAL, MURAMIDASE ACTIVITY, IMMUNE SYSTE HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3GXR	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	GOOSE-TYPE LYSOZYME 1	A	185	1458	0
2	Protein	GOOSE-TYPE LYSOZYME 1	B	183	1442	0
3	Protein	GOOSE-TYPE LYSOZYME 1	C	174	1369	0
4	Protein	GOOSE-TYPE LYSOZYME 1	D	186	1462	0
5	Ligand		E	2	0	29
6	Ligand		F	3	0	43
7	Ligand		G	3	0	43
8	Ligand		H	2	0	29
9	Ligand		I	3	0	43
10	Water			293	0	293
total				1034	5731	480

Proteins

Unit 1	TYR 5 GLY 6 ASP 7 ILE 8 THR 9 GLN 10 VAL 11 GLU 12 THR 13 SER 14 GLY 15 ALA 16 SER 17 SER 18 LYS 19 THR 20 SER 21 ARG 22 GLN 23 ASP 24 LYS 25 LEU 26 GLU 27 TYR 28 ASP 29 GLY 30 VAL 31 ARG 32 ALA 33 SER 34 HIS 35 THR 36 MET 37 ALA 38 GLN 39 THR 40 ASP 41 ALA 42 GLY 43 ARG 44 MET 45 GLU 46 LYS 47 TYR 48 LYS 49 SER 50 PHE 51 ILE 52 ASN 53 ASN 54 VAL 55 ALA 56 LYS 57 LYS 58 HIS 59 VAL 60 VAL 61 ASP 62 PRO 63 ALA 64 VAL 65 ILE 66 ALA 67 ALA 68 ILE 69 ILE 70 SER 71 ARG 72 GLU 73 SER 74 ARG 75 ALA 76 GLY 77 ASN 78 VAL 79 ILE 80 PHE 81 ASN 82 THR 83 THR 84 PRO 85 PRO 86 GLY 87 TRP 88 GLY 89 ASP 90 ASN 91 TYR 92 ASN 93 GLY 94 PHE 95 GLY 96 LEU 97 MET 98 GLN 99 VAL 100 ASP 101 LYS 102 ARG 103 TYR 104 HIS 105 GLU 106 PRO 107 ARG 108 GLY 109 ALA 110 TRP 111 ASN 112 SER 113 GLU 114 GLU 115 HIS 116 ILE 117 ASP 118 GLN 119 ALA 120 THR 121 GLY 122 ILE 123 LEU 124 VAL 125 ASN 126 PHE 127 ILE 128 GLN 129 LEU 130 ILE 131 GLN 132 LYS 133 LYS 134 PHE 135 PRO 136 SER 137 TRP 138 SER 139 THR 140 GLU 141 GLN 142 GLN 143 LEU 144 LYS 145 GLY 146 ALA 147 ILE 148 ALA 149 ALA 150 TYR 151 ASN 152 THR 153 GLY 154 ASP 155 GLY 156 ARG 157 VAL 158 GLU 159 SER 160 TYR 161 GLU 162 SER 163 VAL 164 ASP 165 SER 166 ARG 167 THR 168 THR 169 GLY 170 LYS 171 ASP 172 TYR 173 SER 174 ASN 175 ASP 176 VAL 177 VAL 178 ALA 179 ARG 180 ALA 181 GLN 182 TRP 183 TYR 184 LYS 185 LYS 186 ASN 187 GLY 188 PHE 189
Unit 2	ASP 7 ILE 8 THR 9 GLN 10 VAL 11 GLU 12 THR 13 SER 14 GLY 15 ALA 16 SER 17 SER 18 LYS 19 THR 20 SER 21 ARG 22 GLN 23 ASP 24 LYS 25 LEU 26 GLU 27 TYR 28 ASP 29 GLY 30 VAL 31 ARG 32 ALA 33 SER 34 HIS 35 THR 36 MET 37 ALA 38 GLN 39 THR 40 ASP 41 ALA 42 GLY 43 ARG 44 MET 45 GLU 46 LYS 47 TYR 48 LYS 49 SER 50 PHE 51 ILE 52 ASN 53 ASN 54 VAL 55 ALA 56 LYS 57 LYS 58 HIS 59 VAL 60 VAL 61 ASP 62 PRO 63 ALA 64 VAL 65 ILE 66 ALA 67 ALA 68 ILE 69 ILE 70 SER 71 ARG 72 GLU 73 SER 74 ARG 75 ALA 76 GLY 77 ASN 78 VAL 79 ILE 80 PHE 81 ASN 82 THR 83 THR 84 PRO 85 PRO 86 GLY 87 TRP 88 GLY 89 ASP 90 ASN 91 TYR 92 ASN 93 GLY 94 PHE 95 GLY 96 LEU 97 MET 98 GLN 99 VAL 100 ASP 101 LYS 102 ARG 103 TYR 104 HIS 105 GLU 106 PRO 107 ARG 108 GLY 109 ALA 110 TRP 111 ASN 112 SER 113 GLU 114 GLU 115 HIS 116 ILE 117 ASP 118 GLN 119 ALA 120 THR 121 GLY 122 ILE 123 LEU 124 VAL 125 ASN 126 PHE 127 ILE 128 GLN 129 LEU 130 ILE 131 GLN 132 LYS 133 LYS 134 PHE 135 PRO 136 SER 137 TRP 138 SER 139 THR 140 GLU 141 GLN 142 GLN 143 LEU 144 LYS 145 GLY 146 ALA 147 ILE 148 ALA 149 ALA 150 TYR 151 ASN 152 THR 153 GLY 154 ASP 155 GLY 156 ARG 157 VAL 158 GLU 159 SER 160 TYR 161 GLU 162 SER 163 VAL 164 ASP 165 SER 166 ARG 167 THR 168 THR 169 GLY 170 LYS 171 ASP 172 TYR 173 SER 174 ASN 175 ASP 176 VAL 177 VAL 178 ALA 179 ARG 180 ALA 181 GLN 182 TRP 183 TYR 184 LYS 185 LYS 186 ASN 187 GLY 188 PHE 189
Unit 3	VAL 3 GLY 4 TYR 5 GLY 6 ASP 7 ILE 8 THR 9 GLN 10 VAL 11 GLU 12 THR 13 SER 14 GLY 15 ALA 16 SER 17 SER 18 LYS 19 THR 20 SER 21 ARG 22 GLN 23 ASP 24 LYS 25 LEU 26 GLU 27 TYR 28 ASP 29 GLY 30 VAL 31 ARG 32 ALA 33 SER 34 HIS 35 THR 36 MET 37 ALA 38 GLN 39 THR 40 ASP 41 ALA 42 GLY 43 ARG 44 MET 45 GLU 46 LYS 47 TYR 48 LYS 49 SER 50 PHE 51 ILE 52 ASN 53 ASN 54 VAL 55 ALA 56 LYS 57 LYS 58 HIS 59 VAL 60 VAL 61 ASP 62 PRO 63 ALA 64 VAL 65 ILE 66 ALA 67 ALA 68 ILE 69 ILE 70 SER 71 ARG 72 GLU 73 SER 74 ARG 75 ALA 76 GLY 77 ASN 78 TYR 92 ASN 93 GLY 94 PHE 95 GLY 96 LEU 97 MET 98 GLN 99 VAL 100 ASP 101 LYS 102 ARG 103 TYR 104 HIS 105 GLU 106 PRO 107 ARG 108 GLY 109 ALA 110 TRP 111 ASN 112 SER 113 GLU 114 GLU 115 HIS 116 ILE 117 ASP 118 GLN 119 ALA 120 THR 121 GLY 122 ILE 123 LEU 124 VAL 125 ASN 126 PHE 127 ILE 128 GLN 129 LEU 130 ILE 131 GLN 132 LYS 133 LYS 134 PHE 135 PRO 136 SER 137 TRP 138 SER 139 THR 140 GLU 141 GLN 142 GLN 143 LEU 144 LYS 145 GLY 146 ALA 147 ILE 148 ALA 149 ALA 150 TYR 151 ASN 152 THR 153 GLY 154 ASP 155 GLY 156 ARG 157 VAL 158 GLU 159 SER 160 TYR 161 GLU 162 SER 163 VAL 164 ASP 165 SER 166 ARG 167 THR 168 THR 169 GLY 170 LYS 171 ASP 172 TYR 173 SER 174 ASN 175 ASP 176 VAL 177 VAL 178 ALA 179 ARG 180 ALA 181 GLN 182 TRP 183 TYR 184 LYS 185 LYS 186 ASN 187 GLY 188 PHE 189
Unit 4	GLY 4 TYR 5 GLY 6 ASP 7 ILE 8 THR 9 GLN 10 VAL 11 GLU 12 THR 13 SER 14 GLY 15 ALA 16 SER 17 SER 18 LYS 19 THR 20 SER 21 ARG 22 GLN 23 ASP 24 LYS 25 LEU 26 GLU 27 TYR 28 ASP 29 GLY 30 VAL 31 ARG 32 ALA 33 SER 34 HIS 35 THR 36 MET 37 ALA 38 GLN 39 THR 40 ASP 41 ALA 42 GLY 43 ARG 44 MET 45 GLU 46 LYS 47 TYR 48 LYS 49 SER 50 PHE 51 ILE 52 ASN 53 ASN 54 VAL 55 ALA 56 LYS 57 LYS 58 HIS 59 VAL 60 VAL 61 ASP 62 PRO 63 ALA 64 VAL 65 ILE 66 ALA 67 ALA 68 ILE 69 ILE 70 SER 71 ARG 72 GLU 73 SER 74 ARG 75 ALA 76 GLY 77 ASN 78 VAL 79 ILE 80 PHE 81 ASN 82 THR 83 THR 84 PRO 85 PRO 86 GLY 87 TRP 88 GLY 89 ASP 90 ASN 91 TYR 92 ASN 93 GLY 94 PHE 95 GLY 96 LEU 97 MET 98 GLN 99 VAL 100 ASP 101 LYS 102 ARG 103 TYR 104 HIS 105 GLU 106 PRO 107 ARG 108 GLY 109 ALA 110 TRP 111 ASN 112 SER 113 GLU 114 GLU 115 HIS 116 ILE 117 ASP 118 GLN 119 ALA 120 THR 121 GLY 122 ILE 123 LEU 124 VAL 125 ASN 126 PHE 127 ILE 128 GLN 129 LEU 130 ILE 131 GLN 132 LYS 133 LYS 134 PHE 135 PRO 136 SER 137 TRP 138 SER 139 THR 140 GLU 141 GLN 142 GLN 143 LEU 144 LYS 145 GLY 146 ALA 147 ILE 148 ALA 149 ALA 150 TYR 151 ASN 152 THR 153 GLY 154 ASP 155 GLY 156 ARG 157 VAL 158 GLU 159 SER 160 TYR 161 GLU 162 SER 163 VAL 164 ASP 165 SER 166 ARG 167 THR 168 THR 169 GLY 170 LYS 171 ASP 172 TYR 173 SER 174 ASN 175 ASP 176 VAL 177 VAL 178 ALA 179 ARG 180 ALA 181 GLN 182 TRP 183 TYR 184 LYS 185 LYS 186 ASN 187 GLY 188 PHE 189

Ligands

Unit 5	NAG 1 NAG 2
Unit 6	NAG 1 NAG 2 NAG 3
Unit 7	NAG 1 NAG 2 NAG 3
Unit 8	NAG 1 NAG 2
Unit 9	NAG 1 NAG 2 NAG 3