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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF LACTATE/MALATE DEHYDROGENASE FROM BRUCELLA MELITENSIS IN COMPLEX WITH ADP
Keywords LACTATE/MALATE DEHYDROGENASE, BRUCELLA MELITENSIS, NAD, OXIDOREDUCTASE, TRICARBOXYLIC ACID CYCLE, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3GVI     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MALATE DEHYDROGENASE  A 314 2285 0
2  Protein   MALATE DEHYDROGENASE  B 314 2286 0
3  Protein   MALATE DEHYDROGENASE  C 314 2289 0
4  Protein   MALATE DEHYDROGENASE  D 313 2284 0
5  Protein   MALATE DEHYDROGENASE  E 314 2285 0
6  Protein   MALATE DEHYDROGENASE  F 314 2281 0
7  Ligand   MALATE DEHYDROGENASE  A 1 0 27
8  Ligand   MALATE DEHYDROGENASE  B 1 0 27
9  Ligand   MALATE DEHYDROGENASE  C 1 0 27
10  Ligand   MALATE DEHYDROGENASE  D 1 0 27
11  Ligand   MALATE DEHYDROGENASE  E 1 0 27
12  Ligand   MALATE DEHYDROGENASE  F 1 0 27
13 Water     1311 0 1311
total       3200 13710 1473
Proteins
Unit 1 ALA2 ARG3 ASN4 LYS5 ILE6 ALA7 LEU8 ILE9 GLY10 SER11 GLY12 MET13 ILE14 GLY15 GLY16 THR17 LEU18 ALA19 HIS20 LEU21 ALA22 GLY23 LEU24 LYS25 GLU26 LEU27 GLY28 ASP29 VAL30 VAL31 LEU32 PHE33 ASP34 ILE35 ALA36 GLU37 GLY38 THR39 PRO40 GLN41 GLY42 LYS43 GLY44 LEU45 ASP46 ILE47 ALA48 GLU49 SER50 SER51 PRO52 VAL53 ASP54 GLY55 PHE56 ASP57 ALA58 LYS59 PHE60 THR61 GLY62 ALA63 ASN64 ASP65 TYR66 ALA67 ALA68 ILE69 GLU70 GLY71 ALA72 ASP73 VAL74 VAL75 ILE76 VAL77 THR78 ALA79 GLY80 VAL81 PRO82 ARG83 LYS84 ASP90 ASP91 LEU92 LEU93 GLY94 ILE95 ASN96 LEU97 LYS98 VAL99 MET100 GLU101 GLN102 VAL103 GLY104 ALA105 GLY106 ILE107 LYS108 LYS109 TYR110 ALA111 PRO112 GLU113 ALA114 PHE115 VAL116 ILE117 CYS118 ILE119 THR120 ASN121 PRO122 LEU123 ASP124 ALA125 MET126 VAL127 TRP128 ALA129 LEU130 GLN131 LYS132 PHE133 SER134 GLY135 LEU136 PRO137 ALA138 HIS139 LYS140 VAL141 VAL142 GLY143 MET144 ALA145 GLY146 VAL147 LEU148 ASP149 SER150 ALA151 ARG152 PHE153 ARG154 TYR155 PHE156 LEU157 SER158 GLU159 GLU160 PHE161 ASN162 VAL163 SER164 VAL165 GLU166 ASP167 VAL168 THR169 VAL170 PHE171 VAL172 LEU173 GLY174 GLY175 HIS176 GLY177 ASP178 SER179 MET180 VAL181 PRO182 LEU183 ALA184 ARG185 TYR186 SER187 THR188 VAL189 ALA190 GLY191 ILE192 PRO193 LEU194 PRO195 ASP196 LEU197 VAL198 LYS199 MET200 GLY201 TRP202 THR203 SER204 GLN205 ASP206 LYS207 LEU208 ASP209 LYS210 ILE211 ILE212 GLN213 ARG214 THR215 ARG216 ASP217 GLY218 GLY219 ALA220 GLU221 ILE222 VAL223 GLY224 LEU225 LEU226 LYS227 THR228 GLY229 SER230 ALA231 PHE232 TYR233 ALA234 PRO235 ALA236 ALA237 SER238 ALA239 ILE240 GLN241 MET242 ALA243 GLU244 SER245 TYR246 LEU247 LYS248 ASP249 LYS250 LYS251 ARG252 VAL253 LEU254 PRO255 VAL256 ALA257 ALA258 GLN259 LEU260 SER261 GLY262 GLN263 TYR264 GLY265 VAL266 LYS267 ASP268 MET269 TYR270 VAL271 GLY272 VAL273 PRO274 THR275 VAL276 ILE277 GLY278 ALA279 ASN280 GLY281 VAL282 GLU283 ARG284 ILE285 ILE286 GLU287 ILE288 ASP289 LEU290 ASP291 LYS292 ASP293 GLU294 LYS295 ALA296 GLN297 PHE298 ASP299 LYS300 SER301 VAL302 ALA303 SER304 VAL305 ALA306 GLY307 LEU308 CYS309 GLU310 ALA311 CYS312 ILE313 GLY314 ILE315 ALA316 PRO317 SER318 LEU319 LYS320
Unit 2 ALA2 ARG3 ASN4 LYS5 ILE6 ALA7 LEU8 ILE9 GLY10 SER11 GLY12 MET13 ILE14 GLY15 GLY16 THR17 LEU18 ALA19 HIS20 LEU21 ALA22 GLY23 LEU24 LYS25 GLU26 LEU27 GLY28 ASP29 VAL30 VAL31 LEU32 PHE33 ASP34 ILE35 ALA36 GLU37 GLY38 THR39 PRO40 GLN41 GLY42 LYS43 GLY44 LEU45 ASP46 ILE47 ALA48 GLU49 SER50 SER51 PRO52 VAL53 ASP54 GLY55 PHE56 ASP57 ALA58 LYS59 PHE60 THR61 GLY62 ALA63 ASN64 ASP65 TYR66 ALA67 ALA68 ILE69 GLU70 GLY71 ALA72 ASP73 VAL74 VAL75 ILE76 VAL77 THR78 ALA79 GLY80 VAL81 PRO82 ARG83 LYS84 ASP90 ASP91 LEU92 LEU93 GLY94 ILE95 ASN96 LEU97 LYS98 VAL99 MET100 GLU101 GLN102 VAL103 GLY104 ALA105 GLY106 ILE107 LYS108 LYS109 TYR110 ALA111 PRO112 GLU113 ALA114 PHE115 VAL116 ILE117 CYS118 ILE119 THR120 ASN121 PRO122 LEU123 ASP124 ALA125 MET126 VAL127 TRP128 ALA129 LEU130 GLN131 LYS132 PHE133 SER134 GLY135 LEU136 PRO137 ALA138 HIS139 LYS140 VAL141 VAL142 GLY143 MET144 ALA145 GLY146 VAL147 LEU148 ASP149 SER150 ALA151 ARG152 PHE153 ARG154 TYR155 PHE156 LEU157 SER158 GLU159 GLU160 PHE161 ASN162 VAL163 SER164 VAL165 GLU166 ASP167 VAL168 THR169 VAL170 PHE171 VAL172 LEU173 GLY174 GLY175 HIS176 GLY177 ASP178 SER179 MET180 VAL181 PRO182 LEU183 ALA184 ARG185 TYR186 SER187 THR188 VAL189 ALA190 GLY191 ILE192 PRO193 LEU194 PRO195 ASP196 LEU197 VAL198 LYS199 MET200 GLY201 TRP202 THR203 SER204 GLN205 ASP206 LYS207 LEU208 ASP209 LYS210 ILE211 ILE212 GLN213 ARG214 THR215 ARG216 ASP217 GLY218 GLY219 ALA220 GLU221 ILE222 VAL223 GLY224 LEU225 LEU226 LYS227 THR228 GLY229 SER230 ALA231 PHE232 TYR233 ALA234 PRO235 ALA236 ALA237 SER238 ALA239 ILE240 GLN241 MET242 ALA243 GLU244 SER245 TYR246 LEU247 LYS248 ASP249 LYS250 LYS251 ARG252 VAL253 LEU254 PRO255 VAL256 ALA257 ALA258 GLN259 LEU260 SER261 GLY262 GLN263 TYR264 GLY265 VAL266 LYS267 ASP268 MET269 TYR270 VAL271 GLY272 VAL273 PRO274 THR275 VAL276 ILE277 GLY278 ALA279 ASN280 GLY281 VAL282 GLU283 ARG284 ILE285 ILE286 GLU287 ILE288 ASP289 LEU290 ASP291 LYS292 ASP293 GLU294 LYS295 ALA296 GLN297 PHE298 ASP299 LYS300 SER301 VAL302 ALA303 SER304 VAL305 ALA306 GLY307 LEU308 CYS309 GLU310 ALA311 CYS312 ILE313 GLY314 ILE315 ALA316 PRO317 SER318 LEU319 LYS320
Unit 3 ALA2 ARG3 ASN4 LYS5 ILE6 ALA7 LEU8 ILE9 GLY10 SER11 GLY12 MET13 ILE14 GLY15 GLY16 THR17 LEU18 ALA19 HIS20 LEU21 ALA22 GLY23 LEU24 LYS25 GLU26 LEU27 GLY28 ASP29 VAL30 VAL31 LEU32 PHE33 ASP34 ILE35 ALA36 GLU37 GLY38 THR39 PRO40 GLN41 GLY42 LYS43 GLY44 LEU45 ASP46 ILE47 ALA48 GLU49 SER50 SER51 PRO52 VAL53 ASP54 GLY55 PHE56 ASP57 ALA58 LYS59 PHE60 THR61 GLY62 ALA63 ASN64 ASP65 TYR66 ALA67 ALA68 ILE69 GLU70 GLY71 ALA72 ASP73 VAL74 VAL75 ILE76 VAL77 THR78 ALA79 GLY80 VAL81 PRO82 ARG83 LYS84 ASP90 ASP91 LEU92 LEU93 GLY94 ILE95 ASN96 LEU97 LYS98 VAL99 MET100 GLU101 GLN102 VAL103 GLY104 ALA105 GLY106 ILE107 LYS108 LYS109 TYR110 ALA111 PRO112 GLU113 ALA114 PHE115 VAL116 ILE117 CYS118 ILE119 THR120 ASN121 PRO122 LEU123 ASP124 ALA125 MET126 VAL127 TRP128 ALA129 LEU130 GLN131 LYS132 PHE133 SER134 GLY135 LEU136 PRO137 ALA138 HIS139 LYS140 VAL141 VAL142 GLY143 MET144 ALA145 GLY146 VAL147 LEU148 ASP149 SER150 ALA151 ARG152 PHE153 ARG154 TYR155 PHE156 LEU157 SER158 GLU159 GLU160 PHE161 ASN162 VAL163 SER164 VAL165 GLU166 ASP167 VAL168 THR169 VAL170 PHE171 VAL172 LEU173 GLY174 GLY175 HIS176 GLY177 ASP178 SER179 MET180 VAL181 PRO182 LEU183 ALA184 ARG185 TYR186 SER187 THR188 VAL189 ALA190 GLY191 ILE192 PRO193 LEU194 PRO195 ASP196 LEU197 VAL198 LYS199 MET200 GLY201 TRP202 THR203 SER204 GLN205 ASP206 LYS207 LEU208 ASP209 LYS210 ILE211 ILE212 GLN213 ARG214 THR215 ARG216 ASP217 GLY218 GLY219 ALA220 GLU221 ILE222 VAL223 GLY224 LEU225 LEU226 LYS227 THR228 GLY229 SER230 ALA231 PHE232 TYR233 ALA234 PRO235 ALA236 ALA237 SER238 ALA239 ILE240 GLN241 MET242 ALA243 GLU244 SER245 TYR246 LEU247 LYS248 ASP249 LYS250 LYS251 ARG252 VAL253 LEU254 PRO255 VAL256 ALA257 ALA258 GLN259 LEU260 SER261 GLY262 GLN263 TYR264 GLY265 VAL266 LYS267 ASP268 MET269 TYR270 VAL271 GLY272 VAL273 PRO274 THR275 VAL276 ILE277 GLY278 ALA279 ASN280 GLY281 VAL282 GLU283 ARG284 ILE285 ILE286 GLU287 ILE288 ASP289 LEU290 ASP291 LYS292 ASP293 GLU294 LYS295 ALA296 GLN297 PHE298 ASP299 LYS300 SER301 VAL302 ALA303 SER304 VAL305 ALA306 GLY307 LEU308 CYS309 GLU310 ALA311 CYS312 ILE313 GLY314 ILE315 ALA316 PRO317 SER318 LEU319 LYS320
Unit 4 ALA2 ARG3 ASN4 LYS5 ILE6 ALA7 LEU8 ILE9 GLY10 SER11 GLY12 MET13 ILE14 GLY15 GLY16 THR17 LEU18 ALA19 HIS20 LEU21 ALA22 GLY23 LEU24 LYS25 GLU26 LEU27 GLY28 ASP29 VAL30 VAL31 LEU32 PHE33 ASP34 ILE35 ALA36 GLU37 GLY38 THR39 PRO40 GLN41 GLY42 LYS43 GLY44 LEU45 ASP46 ILE47 ALA48 GLU49 SER50 SER51 PRO52 VAL53 ASP54 GLY55 PHE56 ASP57 ALA58 LYS59 PHE60 THR61 GLY62 ALA63 ASN64 ASP65 TYR66 ALA67 ALA68 ILE69 GLU70 GLY71 ALA72 ASP73 VAL74 VAL75 ILE76 VAL77 THR78 ALA79 GLY80 VAL81 PRO82 ARG83 LYS84 ASP90 ASP91 LEU92 LEU93 GLY94 ILE95 ASN96 LEU97 LYS98 VAL99 MET100 GLU101 GLN102 VAL103 GLY104 ALA105 GLY106 ILE107 LYS108 LYS109 TYR110 ALA111 PRO112 GLU113 ALA114 PHE115 VAL116 ILE117 CYS118 ILE119 THR120 ASN121 PRO122 LEU123 ASP124 ALA125 MET126 VAL127 TRP128 ALA129 LEU130 GLN131 LYS132 PHE133 SER134 GLY135 LEU136 PRO137 ALA138 HIS139 LYS140 VAL141 VAL142 GLY143 MET144 ALA145 GLY146 VAL147 LEU148 ASP149 SER150 ALA151 ARG152 PHE153 ARG154 TYR155 PHE156 LEU157 SER158 GLU159 GLU160 PHE161 ASN162 VAL163 SER164 VAL165 GLU166 ASP167 VAL168 THR169 VAL170 PHE171 VAL172 LEU173 GLY174 GLY175 HIS176 GLY177 ASP178 SER179 MET180 VAL181 PRO182 LEU183 ALA184 ARG185 TYR186 SER187 THR188 VAL189 ALA190 GLY191 ILE192 PRO193 LEU194 PRO195 ASP196 LEU197 VAL198 LYS199 MET200 GLY201 TRP202 THR203 SER204 GLN205 ASP206 LYS207 LEU208 ASP209 LYS210 ILE211 ILE212 GLN213 ARG214 THR215 ARG216 ASP217 GLY218 GLY219 ALA220 GLU221 ILE222 VAL223 GLY224 LEU225 LEU226 LYS227 THR228 GLY229 SER230 ALA231 PHE232 TYR233 ALA234 PRO235 ALA236 ALA237 SER238 ALA239 ILE240 GLN241 MET242 ALA243 GLU244 SER245 TYR246 LEU247 LYS248 ASP249 LYS250 LYS251 ARG252 VAL253 LEU254 PRO255 VAL256 ALA257 ALA258 GLN259 LEU260 SER261 GLY262 GLN263 TYR264 GLY265 VAL266 LYS267 ASP268 MET269 TYR270 VAL271 GLY272 VAL273 PRO274 THR275 VAL276 ILE277 GLY278 ALA279 ASN280 GLY281 VAL282 GLU283 ARG284 ILE285 ILE286 GLU287 ILE288 ASP289 LEU290 ASP291 LYS292 ASP293 GLU294 LYS295 ALA296 GLN297 PHE298 ASP299 LYS300 SER301 VAL302 ALA303 SER304 VAL305 ALA306 GLY307 LEU308 CYS309 GLU310 ALA311 CYS312 ILE313 GLY314 ILE315 ALA316 PRO317 SER318 LEU319
Unit 5 ALA2 ARG3 ASN4 LYS5 ILE6 ALA7 LEU8 ILE9 GLY10 SER11 GLY12 MET13 ILE14 GLY15 GLY16 THR17 LEU18 ALA19 HIS20 LEU21 ALA22 GLY23 LEU24 LYS25 GLU26 LEU27 GLY28 ASP29 VAL30 VAL31 LEU32 PHE33 ASP34 ILE35 ALA36 GLU37 GLY38 THR39 PRO40 GLN41 GLY42 LYS43 GLY44 LEU45 ASP46 ILE47 ALA48 GLU49 SER50 SER51 PRO52 VAL53 ASP54 GLY55 PHE56 ASP57 ALA58 LYS59 PHE60 THR61 GLY62 ALA63 ASN64 ASP65 TYR66 ALA67 ALA68 ILE69 GLU70 GLY71 ALA72 ASP73 VAL74 VAL75 ILE76 VAL77 THR78 ALA79 GLY80 VAL81 PRO82 ARG83 LYS84 ASP90 ASP91 LEU92 LEU93 GLY94 ILE95 ASN96 LEU97 LYS98 VAL99 MET100 GLU101 GLN102 VAL103 GLY104 ALA105 GLY106 ILE107 LYS108 LYS109 TYR110 ALA111 PRO112 GLU113 ALA114 PHE115 VAL116 ILE117 CYS118 ILE119 THR120 ASN121 PRO122 LEU123 ASP124 ALA125 MET126 VAL127 TRP128 ALA129 LEU130 GLN131 LYS132 PHE133 SER134 GLY135 LEU136 PRO137 ALA138 HIS139 LYS140 VAL141 VAL142 GLY143 MET144 ALA145 GLY146 VAL147 LEU148 ASP149 SER150 ALA151 ARG152 PHE153 ARG154 TYR155 PHE156 LEU157 SER158 GLU159 GLU160 PHE161 ASN162 VAL163 SER164 VAL165 GLU166 ASP167 VAL168 THR169 VAL170 PHE171 VAL172 LEU173 GLY174 GLY175 HIS176 GLY177 ASP178 SER179 MET180 VAL181 PRO182 LEU183 ALA184 ARG185 TYR186 SER187 THR188 VAL189 ALA190 GLY191 ILE192 PRO193 LEU194 PRO195 ASP196 LEU197 VAL198 LYS199 MET200 GLY201 TRP202 THR203 SER204 GLN205 ASP206 LYS207 LEU208 ASP209 LYS210 ILE211 ILE212 GLN213 ARG214 THR215 ARG216 ASP217 GLY218 GLY219 ALA220 GLU221 ILE222 VAL223 GLY224 LEU225 LEU226 LYS227 THR228 GLY229 SER230 ALA231 PHE232 TYR233 ALA234 PRO235 ALA236 ALA237 SER238 ALA239 ILE240 GLN241 MET242 ALA243 GLU244 SER245 TYR246 LEU247 LYS248 ASP249 LYS250 LYS251 ARG252 VAL253 LEU254 PRO255 VAL256 ALA257 ALA258 GLN259 LEU260 SER261 GLY262 GLN263 TYR264 GLY265 VAL266 LYS267 ASP268 MET269 TYR270 VAL271 GLY272 VAL273 PRO274 THR275 VAL276 ILE277 GLY278 ALA279 ASN280 GLY281 VAL282 GLU283 ARG284 ILE285 ILE286 GLU287 ILE288 ASP289 LEU290 ASP291 LYS292 ASP293 GLU294 LYS295 ALA296 GLN297 PHE298 ASP299 LYS300 SER301 VAL302 ALA303 SER304 VAL305 ALA306 GLY307 LEU308 CYS309 GLU310 ALA311 CYS312 ILE313 GLY314 ILE315 ALA316 PRO317 SER318 LEU319 LYS320
Unit 6 ALA2 ARG3 ASN4 LYS5 ILE6 ALA7 LEU8 ILE9 GLY10 SER11 GLY12 MET13 ILE14 GLY15 GLY16 THR17 LEU18 ALA19 HIS20 LEU21 ALA22 GLY23 LEU24 LYS25 GLU26 LEU27 GLY28 ASP29 VAL30 VAL31 LEU32 PHE33 ASP34 ILE35 ALA36 GLU37 GLY38 THR39 PRO40 GLN41 GLY42 LYS43 GLY44 LEU45 ASP46 ILE47 ALA48 GLU49 SER50 SER51 PRO52 VAL53 ASP54 GLY55 PHE56 ASP57 ALA58 LYS59 PHE60 THR61 GLY62 ALA63 ASN64 ASP65 TYR66 ALA67 ALA68 ILE69 GLU70 GLY71 ALA72 ASP73 VAL74 VAL75 ILE76 VAL77 THR78 ALA79 GLY80 VAL81 PRO82 ARG83 LYS84 ASP90 ASP91 LEU92 LEU93 GLY94 ILE95 ASN96 LEU97 LYS98 VAL99 MET100 GLU101 GLN102 VAL103 GLY104 ALA105 GLY106 ILE107 LYS108 LYS109 TYR110 ALA111 PRO112 GLU113 ALA114 PHE115 VAL116 ILE117 CYS118 ILE119 THR120 ASN121 PRO122 LEU123 ASP124 ALA125 MET126 VAL127 TRP128 ALA129 LEU130 GLN131 LYS132 PHE133 SER134 GLY135 LEU136 PRO137 ALA138 HIS139 LYS140 VAL141 VAL142 GLY143 MET144 ALA145 GLY146 VAL147 LEU148 ASP149 SER150 ALA151 ARG152 PHE153 ARG154 TYR155 PHE156 LEU157 SER158 GLU159 GLU160 PHE161 ASN162 VAL163 SER164 VAL165 GLU166 ASP167 VAL168 THR169 VAL170 PHE171 VAL172 LEU173 GLY174 GLY175 HIS176 GLY177 ASP178 SER179 MET180 VAL181 PRO182 LEU183 ALA184 ARG185 TYR186 SER187 THR188 VAL189 ALA190 GLY191 ILE192 PRO193 LEU194 PRO195 ASP196 LEU197 VAL198 LYS199 MET200 GLY201 TRP202 THR203 SER204 GLN205 ASP206 LYS207 LEU208 ASP209 LYS210 ILE211 ILE212 GLN213 ARG214 THR215 ARG216 ASP217 GLY218 GLY219 ALA220 GLU221 ILE222 VAL223 GLY224 LEU225 LEU226 LYS227 THR228 GLY229 SER230 ALA231 PHE232 TYR233 ALA234 PRO235 ALA236 ALA237 SER238 ALA239 ILE240 GLN241 MET242 ALA243 GLU244 SER245 TYR246 LEU247 LYS248 ASP249 LYS250 LYS251 ARG252 VAL253 LEU254 PRO255 VAL256 ALA257 ALA258 GLN259 LEU260 SER261 GLY262 GLN263 TYR264 GLY265 VAL266 LYS267 ASP268 MET269 TYR270 VAL271 GLY272 VAL273 PRO274 THR275 VAL276 ILE277 GLY278 ALA279 ASN280 GLY281 VAL282 GLU283 ARG284 ILE285 ILE286 GLU287 ILE288 ASP289 LEU290 ASP291 LYS292 ASP293 GLU294 LYS295 ALA296 GLN297 PHE298 ASP299 LYS300 SER301 VAL302 ALA303 SER304 VAL305 ALA306 GLY307 LEU308 CYS309 GLU310 ALA311 CYS312 ILE313 GLY314 ILE315 ALA316 PRO317 SER318 LEU319 LYS320
Ligands
Unit 7 ADP401
Unit 8 ADP401
Unit 9 ADP401
Unit 10 ADP401
Unit 11 ADP401
Unit 12 ADP401
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany