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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF GLUTARYL-COA DEHYDROGENASE FROM BURKHOL PSEUDOMALLEI WITH FRAGMENT (1,4-DIMETHYL-1,2,3,4- TETRAHYDROQUINOXALIN-6-YL)METHYLAMINE
Keywords SSGCID, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DI GLUTARYL-COA DEHYDROGENASE, BUPSA.00027.A, FRAGMENT CRYSTAL FRAGMENTS OF LIFE, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3GQT     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GLUTARYL-COA DEHYDROGENASE  A 383 2903 0
2  Protein   GLUTARYL-COA DEHYDROGENASE  B 372 2837 0
3  Protein   GLUTARYL-COA DEHYDROGENASE  C 385 2910 0
4  Protein   GLUTARYL-COA DEHYDROGENASE  D 376 2875 0
5  Ligand   GLUTARYL-COA DEHYDROGENASE  A 1 0 14
6  Ligand   GLUTARYL-COA DEHYDROGENASE  B 1 0 14
7  Ligand   GLUTARYL-COA DEHYDROGENASE  D 1 0 14
8 Water     286 0 286
total       1805 11525 328
Proteins
Unit 1 ALA4 THR5 PHE6 HIS7 TRP8 ASP9 ASP10 PRO11 LEU12 LEU13 LEU14 ASP15 GLN16 GLN17 LEU18 ALA19 ASP20 ASP21 GLU22 ARG23 MET24 VAL25 ARG26 ASP27 ALA28 ALA29 HIS30 ALA31 TYR32 ALA33 GLN34 GLY35 LYS36 LEU37 ALA38 PRO39 ARG40 VAL41 THR42 GLU43 ALA44 PHE45 ARG46 HIS47 GLU48 THR49 THR50 ASP51 ALA52 ALA53 ILE54 PHE55 ARG56 GLU57 MET58 GLY59 GLU60 ILE61 GLY62 LEU63 LEU64 GLY65 PRO66 THR67 ILE68 PRO69 GLU70 GLN71 TYR72 GLY73 GLY74 PRO75 GLY76 LEU77 ASP78 TYR79 VAL80 SER81 TYR82 GLY83 LEU84 ILE85 ALA86 ARG87 GLU88 VAL89 GLU90 ARG91 VAL92 ASP93 SER94 GLY95 TYR96 ARG97 SER98 MET99 MET100 SER101 VAL102 GLN103 SER104 SER105 LEU106 VAL107 MET108 VAL109 PRO110 ILE111 PHE112 GLU113 PHE114 GLY115 SER116 ASP117 ALA118 GLN119 LYS120 GLU121 LYS122 TYR123 LEU124 PRO125 LYS126 LEU127 ALA128 THR129 GLY130 GLU131 TRP132 ILE133 GLY134 CYS135 PHE136 GLY137 LEU138 THR139 GLU140 PRO141 PRO147 GLY148 SER149 MET150 VAL151 THR152 ARG153 ALA154 ARG155 LYS156 VAL157 PRO158 GLY159 GLY160 TYR161 SER162 LEU163 SER164 GLY165 SER166 LYS167 MET168 TRP169 ILE170 THR171 ASN172 SER173 PRO174 ILE175 ALA176 ASP177 VAL178 PHE179 VAL180 VAL181 TRP182 ALA183 LYS184 LEU185 ASP186 GLU187 ASP188 GLY189 ARG190 ASP191 GLU192 ILE193 ARG194 GLY195 PHE196 ILE197 LEU198 GLU199 LYS200 GLY201 CYS202 LYS203 GLY204 LEU205 SER206 ALA207 PRO208 ALA209 ILE210 HIS211 GLY212 LYS213 VAL214 GLY215 LEU216 ARG217 ALA218 SER219 ILE220 THR221 GLY222 GLU223 ILE224 VAL225 LEU226 ASP227 GLU228 ALA229 PHE230 VAL231 PRO232 GLU233 GLU234 ASN235 ILE236 LEU237 PRO238 HIS239 VAL240 LYS241 GLY242 LEU243 ARG244 GLY245 PRO246 PHE247 THR248 CYS249 LEU250 ASN251 SER252 ALA253 ARG254 TYR255 GLY256 ILE257 ALA258 TRP259 GLY260 ALA261 LEU262 GLY263 ALA264 ALA265 GLU266 SER267 CYS268 TRP269 HIS270 ILE271 ALA272 ARG273 GLN274 TYR275 VAL276 LEU277 ASP278 ARG279 LYS280 GLN281 PHE282 GLY283 ARG284 PRO285 LEU286 ALA287 ALA288 ASN289 GLN290 LEU291 ILE292 GLN293 LYS294 LYS295 LEU296 ALA297 ASP298 MET299 GLN300 THR301 GLU302 ILE303 THR304 LEU305 GLY306 LEU307 GLN308 GLY309 VAL310 LEU311 ARG312 LEU313 GLY314 ARG315 MET316 LYS317 ASP318 GLU319 GLY320 THR321 ALA322 ALA323 VAL324 GLU325 ILE326 THR327 SER328 ILE329 MET330 LYS331 ARG332 ASN333 SER334 CYS335 GLY336 LYS337 ALA338 LEU339 ASP340 ILE341 ALA342 ARG343 LEU344 ALA345 ARG346 ASP347 MET348 LEU349 GLY350 GLY351 ASN352 GLY353 ILE354 SER355 ASP356 GLU357 PHE358 GLY359 VAL360 ALA361 ARG362 HIS363 LEU364 VAL365 ASN366 LEU367 GLU368 VAL369 VAL370 ASN371 THR372 TYR373 HIS377 ASP378 ILE379 HIS380 ALA381 LEU382 ILE383 LEU384 GLY385 ARG386 ALA387 GLN388 THR389 GLY390 ILE391 GLN392 ALA393 PHE394
Unit 2 ALA4 THR5 PHE6 HIS7 TRP8 ASP9 ASP10 PRO11 LEU12 LEU13 LEU14 ASP15 GLN16 GLN17 LEU18 ALA19 ASP20 ASP21 GLU22 ARG23 MET24 VAL25 ARG26 ASP27 ALA28 ALA29 HIS30 ALA31 TYR32 ALA33 GLN34 GLY35 LYS36 LEU37 ALA38 PRO39 ARG40 VAL41 THR42 GLU43 ALA44 PHE45 ARG46 HIS47 GLU48 THR49 THR50 ASP51 ALA52 ALA53 ILE54 PHE55 ARG56 GLU57 MET58 GLY59 GLU60 ILE61 GLY62 LEU63 LEU64 GLY65 PRO66 THR67 ILE68 PRO69 GLU70 GLN71 TYR72 GLY73 GLY74 PRO75 GLY76 LEU77 ASP78 TYR79 VAL80 SER81 TYR82 GLY83 LEU84 ILE85 ALA86 ARG87 GLU88 VAL89 GLU90 ARG91 VAL92 ASP93 SER94 GLY95 TYR96 ARG97 SER98 MET99 MET100 SER101 VAL102 GLN103 SER104 SER105 LEU106 VAL107 MET108 VAL109 PRO110 ILE111 PHE112 GLU113 PHE114 GLY115 SER116 ASP117 ALA118 GLN119 LYS120 GLU121 LYS122 TYR123 LEU124 PRO125 LYS126 LEU127 ALA128 THR129 GLY130 GLU131 TRP132 ILE133 GLY134 CYS135 PHE136 GLY137 LEU138 THR139 GLU140 PRO141 MET150 VAL151 THR152 ARG153 ALA154 ARG155 LYS156 VAL157 PRO158 GLY159 GLY160 TYR161 SER162 LEU163 SER164 GLY165 SER166 LYS167 MET168 TRP169 ILE170 THR171 ASN172 SER173 PRO174 ILE175 ALA176 ASP177 VAL178 PHE179 VAL180 VAL181 TRP182 ALA183 LYS184 LEU185 ASP186 ASP191 GLU192 ILE193 ARG194 GLY195 PHE196 ILE197 LEU198 GLU199 LYS200 GLY201 CYS202 LYS203 GLY204 LEU205 SER206 ALA207 PRO208 ALA209 ILE210 HIS211 GLY212 LYS213 VAL214 GLY215 LEU216 ARG217 ALA218 SER219 ILE220 THR221 GLY222 GLU223 ILE224 VAL225 LEU226 ASP227 GLU228 ALA229 PHE230 VAL231 PRO232 GLU233 GLU234 ASN235 ILE236 LEU237 PRO238 HIS239 VAL240 LYS241 GLY242 LEU243 ARG244 GLY245 PRO246 PHE247 THR248 CYS249 LEU250 ASN251 SER252 ALA253 ARG254 TYR255 GLY256 ILE257 ALA258 TRP259 GLY260 ALA261 LEU262 GLY263 ALA264 ALA265 GLU266 SER267 CYS268 TRP269 HIS270 ILE271 ALA272 ARG273 GLN274 TYR275 VAL276 LEU277 ASP278 ARG279 LYS280 GLN281 PHE282 GLY283 ARG284 PRO285 LEU286 ALA287 ALA288 ASN289 GLN290 LEU291 ILE292 GLN293 LYS294 LYS295 LEU296 ALA297 ASP298 MET299 GLN300 THR301 GLU302 ILE303 THR304 LEU305 GLY306 LEU307 GLN308 GLY309 VAL310 LEU311 ARG312 LEU313 GLY314 ARG315 MET316 LYS317 ASP318 GLU319 GLY320 THR321 ALA322 ALA323 VAL324 GLU325 ILE326 THR327 SER328 ILE329 MET330 LYS331 ARG332 ASN333 SER334 CYS335 GLY336 LYS337 ALA338 LEU339 ASP340 ILE341 ALA342 ARG343 LEU344 ALA345 ARG346 ASP347 MET348 LEU349 GLY350 PHE358 GLY359 VAL360 ALA361 ARG362 HIS363 LEU364 VAL365 ASN366 LEU367 GLU368 VAL369 VAL370 ASN371 THR372 TYR373 GLU374 GLY375 THR376 HIS377 ASP378 ILE379 HIS380 ALA381 LEU382 ILE383 LEU384 GLY385 ARG386 ALA387 GLN388 THR389 GLY390 ILE391 GLN392 ALA393 PHE394
Unit 3 ALA4 THR5 PHE6 HIS7 TRP8 ASP9 ASP10 PRO11 LEU12 LEU13 LEU14 ASP15 GLN16 GLN17 LEU18 ALA19 ASP20 ASP21 GLU22 ARG23 MET24 VAL25 ARG26 ASP27 ALA28 ALA29 HIS30 ALA31 TYR32 ALA33 GLN34 GLY35 LYS36 LEU37 ALA38 PRO39 ARG40 VAL41 THR42 GLU43 ALA44 PHE45 ARG46 HIS47 GLU48 THR49 THR50 ASP51 ALA52 ALA53 ILE54 PHE55 ARG56 GLU57 MET58 GLY59 GLU60 ILE61 GLY62 LEU63 LEU64 GLY65 PRO66 THR67 ILE68 PRO69 GLU70 GLN71 TYR72 GLY73 GLY74 PRO75 GLY76 LEU77 ASP78 TYR79 VAL80 SER81 TYR82 GLY83 LEU84 ILE85 ALA86 ARG87 GLU88 VAL89 GLU90 ARG91 VAL92 ASP93 SER94 GLY95 TYR96 ARG97 SER98 MET99 MET100 SER101 VAL102 GLN103 SER104 SER105 LEU106 VAL107 MET108 VAL109 PRO110 ILE111 PHE112 GLU113 PHE114 GLY115 SER116 ASP117 ALA118 GLN119 LYS120 GLU121 LYS122 TYR123 LEU124 PRO125 LYS126 LEU127 ALA128 THR129 GLY130 GLU131 TRP132 ILE133 GLY134 CYS135 PHE136 GLY137 LEU138 THR139 GLU140 PRO141 ASN142 HIS143 GLY144 SER145 ASP146 PRO147 GLY148 SER149 MET150 VAL151 THR152 ARG153 ALA154 ARG155 LYS156 VAL157 PRO158 GLY159 GLY160 TYR161 SER162 LEU163 SER164 GLY165 SER166 LYS167 MET168 TRP169 ILE170 THR171 ASN172 SER173 PRO174 ILE175 ALA176 ASP177 VAL178 PHE179 VAL180 VAL181 TRP182 ALA183 LYS184 LEU185 ASP186 GLU187 ASP188 GLY189 ARG190 ASP191 GLU192 ILE193 ARG194 GLY195 PHE196 ILE197 LEU198 GLU199 LYS200 GLY201 CYS202 LYS203 GLY204 LEU205 SER206 ALA207 PRO208 ALA209 ILE210 HIS211 GLY212 LYS213 VAL214 GLY215 LEU216 ARG217 ALA218 SER219 ILE220 THR221 GLY222 GLU223 ILE224 VAL225 LEU226 ASP227 GLU228 ALA229 PHE230 VAL231 PRO232 GLU233 GLU234 ASN235 ILE236 LEU237 PRO238 HIS239 VAL240 LYS241 GLY242 LEU243 ARG244 GLY245 PRO246 PHE247 THR248 CYS249 LEU250 ASN251 SER252 ALA253 ARG254 TYR255 GLY256 ILE257 ALA258 TRP259 GLY260 ALA261 LEU262 GLY263 ALA264 ALA265 GLU266 SER267 CYS268 TRP269 HIS270 ILE271 ALA272 ARG273 GLN274 TYR275 VAL276 LEU277 ASP278 ARG279 LYS280 GLN281 PHE282 GLY283 ARG284 PRO285 LEU286 ALA287 ALA288 ASN289 GLN290 LEU291 ILE292 GLN293 LYS294 LYS295 LEU296 ALA297 ASP298 MET299 GLN300 THR301 GLU302 ILE303 THR304 LEU305 GLY306 LEU307 GLN308 GLY309 VAL310 LEU311 ARG312 LEU313 GLY314 ARG315 MET316 LYS317 ASP318 GLU319 GLY320 THR321 ALA322 ALA323 VAL324 GLU325 ILE326 THR327 SER328 ILE329 MET330 LYS331 ARG332 ASN333 SER334 CYS335 GLY336 LYS337 ALA338 LEU339 ASP340 ILE341 ALA342 ARG343 LEU344 ALA345 ARG346 ASP347 MET348 LEU349 GLY350 GLU357 PHE358 GLY359 VAL360 ALA361 ARG362 HIS363 LEU364 VAL365 ASN366 LEU367 GLU368 VAL369 VAL370 ASN371 THR372 TYR373 GLU374 GLY375 THR376 HIS377 ASP378 ILE379 HIS380 ALA381 LEU382 ILE383 LEU384 GLY385 ARG386 ALA387 GLN388 THR389 GLY390 ILE391 GLN392 ALA393 PHE394
Unit 4 ALA4 THR5 PHE6 HIS7 TRP8 ASP9 ASP10 PRO11 LEU12 LEU13 LEU14 ASP15 GLN16 GLN17 LEU18 ALA19 ASP20 ASP21 GLU22 ARG23 MET24 VAL25 ARG26 ASP27 ALA28 ALA29 HIS30 ALA31 TYR32 ALA33 GLN34 GLY35 LYS36 LEU37 ALA38 PRO39 ARG40 VAL41 THR42 GLU43 ALA44 PHE45 ARG46 HIS47 GLU48 THR49 THR50 ASP51 ALA52 ALA53 ILE54 PHE55 ARG56 GLU57 MET58 GLY59 GLU60 ILE61 GLY62 LEU63 LEU64 GLY65 PRO66 THR67 ILE68 PRO69 GLU70 GLN71 TYR72 GLY73 GLY74 PRO75 GLY76 LEU77 ASP78 TYR79 VAL80 SER81 TYR82 GLY83 LEU84 ILE85 ALA86 ARG87 GLU88 VAL89 GLU90 ARG91 VAL92 ASP93 SER94 GLY95 TYR96 ARG97 SER98 MET99 MET100 SER101 VAL102 GLN103 SER104 SER105 LEU106 VAL107 MET108 VAL109 PRO110 ILE111 PHE112 GLU113 PHE114 GLY115 SER116 ASP117 ALA118 GLN119 LYS120 GLU121 LYS122 TYR123 LEU124 PRO125 LYS126 LEU127 ALA128 THR129 GLY130 GLU131 TRP132 ILE133 GLY134 CYS135 PHE136 GLY137 LEU138 THR139 GLU140 PRO141 MET150 VAL151 THR152 ARG153 ALA154 ARG155 LYS156 VAL157 PRO158 GLY159 GLY160 TYR161 SER162 LEU163 SER164 GLY165 SER166 LYS167 MET168 TRP169 ILE170 THR171 ASN172 SER173 PRO174 ILE175 ALA176 ASP177 VAL178 PHE179 VAL180 VAL181 TRP182 ALA183 LYS184 LEU185 ASP186 ASP191 GLU192 ILE193 ARG194 GLY195 PHE196 ILE197 LEU198 GLU199 LYS200 GLY201 CYS202 LYS203 GLY204 LEU205 SER206 ALA207 PRO208 ALA209 ILE210 HIS211 GLY212 LYS213 VAL214 GLY215 LEU216 ARG217 ALA218 SER219 ILE220 THR221 GLY222 GLU223 ILE224 VAL225 LEU226 ASP227 GLU228 ALA229 PHE230 VAL231 PRO232 GLU233 GLU234 ASN235 ILE236 LEU237 PRO238 HIS239 VAL240 LYS241 GLY242 LEU243 ARG244 GLY245 PRO246 PHE247 THR248 CYS249 LEU250 ASN251 SER252 ALA253 ARG254 TYR255 GLY256 ILE257 ALA258 TRP259 GLY260 ALA261 LEU262 GLY263 ALA264 ALA265 GLU266 SER267 CYS268 TRP269 HIS270 ILE271 ALA272 ARG273 GLN274 TYR275 VAL276 LEU277 ASP278 ARG279 LYS280 GLN281 PHE282 GLY283 ARG284 PRO285 LEU286 ALA287 ALA288 ASN289 GLN290 LEU291 ILE292 GLN293 LYS294 LYS295 LEU296 ALA297 ASP298 MET299 GLN300 THR301 GLU302 ILE303 THR304 LEU305 GLY306 LEU307 GLN308 GLY309 VAL310 LEU311 ARG312 LEU313 GLY314 ARG315 MET316 LYS317 ASP318 GLU319 GLY320 THR321 ALA322 ALA323 VAL324 GLU325 ILE326 THR327 SER328 ILE329 MET330 LYS331 ARG332 ASN333 SER334 CYS335 GLY336 LYS337 ALA338 LEU339 ASP340 ILE341 ALA342 ARG343 LEU344 ALA345 ARG346 ASP347 MET348 LEU349 GLY350 GLY351 ASN352 GLY353 ILE354 SER355 ASP356 GLU357 PHE358 GLY359 VAL360 ALA361 ARG362 HIS363 LEU364 VAL365 ASN366 LEU367 GLU368 VAL369 VAL370 ASN371 THR372 TYR373 GLU374 HIS377 ASP378 ILE379 HIS380 ALA381 LEU382 ILE383 LEU384 GLY385 ARG386 ALA387 GLN388 THR389 GLY390 ILE391 GLN392 ALA393
Ligands
Unit 5 UFO1000
Unit 6 UFO1001
Unit 7 UFO1000
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany