Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF ANTI-HIV-1 FAB 268-D IN COMPLEX WITH V3 MN
Keywords HIV, V3 LOOP, ANTIBODY-ANTIGEN INTERACTIONS, AIDS, APOPTOSIS MEMBRANE, CLEAVAGE ON PAIR OF BASIC RESIDUES, DISULFIDE BON ENVELOPE PROTEIN, FUSION PROTEIN, GLYCOPROTEIN, HOST-VIRUS INTERACTION, MEMBRANE, TRANSMEMBRANE, VIRAL IMMUNOEVASION, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3GO1     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FAB 268-D, LIGHT CHAIN  L 209 1576 0
2  Protein   FAB 268-D, HEAVY CHAIN  H 222 1665 0
3  Protein   ENVELOPE GLYCOPROTEIN GP160  P 14 118 0
4  Ligand   FAB 268-D, LIGHT CHAIN  L 2 0 10
5  Ligand   FAB 268-D, HEAVY CHAIN  H 3 0 15
6 Water     351 0 351
total       801 3359 376

Proteins
Unit 1 SER1 TYR2 VAL3 LEU4 THR5 GLN6 PRO7 PRO8 SER9 VAL11 SER12 VAL13 SER14 PRO15 GLY16 GLN17 THR18 ALA19 ARG20 ILE21 THR22 CYS23 SER24 ALA25 GLU26 ALA27 LEU28 SER29 ASN30 GLN31 TYR32 ALA33 TYR34 TRP35 TYR36 ARG37 GLN38 ARG39 PRO40 GLY41 GLN42 ALA43 PRO44 LEU45 LEU46 ILE47 ILE48 TYR49 LYS50 ASP51 THR52 LYS53 ARG54 PRO55 SER56 GLY57 ILE58 PRO59 GLU60 ARG61 PHE62 SER63 GLY64 SER65 THR66 SER67 GLY68 THR69 THR70 VAL71 THR72 LEU73 THR74 ILE75 SER76 GLY77 VAL78 GLN79 ALA80 GLU81 ASP82 GLU83 ALA84 ASP85 TYR86 TYR87 CYS88 GLN89 SER90 ALA91 ASP92 SER93 SER94 GLY95 ASP95A TYR96 VAL97 PHE98 GLY99 GLY100 GLY101 THR102 LYS103 VAL104 THR105 VAL106 LEU106A GLY107 GLN108 PRO109 LYS110 ALA111 ASN112 PRO113 THR114 VAL115 THR116 LEU117 PHE118 PRO119 PRO120 SER121 SER122 GLU123 GLU124 LEU125 GLN126 ALA127 ASN128 LYS129 ALA130 THR131 LEU132 VAL133 CYS134 LEU135 ILE136 SER137 ASP138 PHE139 TYR140 PRO141 GLY142 ALA143 VAL144 THR145 VAL146 ALA147 TRP148 LYS149 ALA150 ASP151 GLY152 SER153 PRO154 VAL155 LYS156 ALA157 GLY158 VAL159 GLU160 THR161 THR162 LYS163 PRO164 SER165 LYS166 GLN167 SER168 ASN169 ASN170 LYS171 TYR172 ALA173 ALA174 SER175 SER176 TYR177 LEU178 SER179 LEU180 THR181 PRO182 GLU183 GLN184 TRP185 LYS186 SER187 HIS188 ARG189 SER190 TYR191 SER192 CYS193 GLN194 VAL195 THR196 HIS197 GLU198 GLY199 SER200 THR201 VAL202 GLU203 LYS204 THR205 VAL206 ALA207 PRO208
Unit 2 GLU1 VAL2 GLN3 LEU4 GLN5 GLU6 SER7 GLY8 PRO9 GLY10 LEU11 VAL12 LYS13 PRO14 SER15 GLU16 THR17 LEU18 SER19 LEU20 THR21 CYS22 THR23 VAL24 SER25 GLY26 GLY27 PRO28 ILE29 ASN30 ASN31 ALA32 TYR33 TRP34 THR35 TRP36 ILE37 ARG38 GLN39 PRO40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TYR47 LEU48 GLY49 TYR50 VAL51 TYR52 HIS53 THR54 GLY55 VAL56 THR57 ASN58 TYR59 ASN60 PRO61 SER62 LEU63 LYS64 SER65 ARG66 LEU67 THR68 ILE69 THR70 ILE71 ASP72 THR73 SER74 ARG75 LYS76 GLN77 LEU78 SER79 LEU80 SER81 LEU82 LYS82A PHE82B VAL82C THR83 ALA84 ALA85 ASP86 SER87 ALA88 VAL89 TYR90 TYR91 CYS92 ALA93 ARG94 GLU95 TRP96 ALA97 GLU98 ASP99 GLY100 ASP100A PHE100B GLY100C ASN100D ALA100E PHE100F HIS101 VAL102 TRP103 GLY104 GLN105 GLY106 THR107 MET108 VAL109 ALA110 VAL111 SER112 SER113 ALA114 SER115 THR116 LYS117 GLY118 PRO119 SER120 VAL121 PHE122 PRO123 LEU124 ALA125 PRO126 SER127 SER128 LYS129 SER130 THR131 SER132 GLY133 GLY134 THR135 ALA136 ALA137 LEU138 GLY139 CYS140 LEU141 VAL142 LYS143 ASP144 TYR145 PHE146 PRO147 GLU148 PRO149 VAL150 THR151 VAL152 SER153 TRP154 ASN155 SER156 GLY157 ALA158 LEU159 THR160 SER161 GLY162 VAL163 HIS164 THR165 PHE166 PRO167 ALA168 VAL169 LEU170 GLN171 SER172 SER173 GLY174 LEU175 TYR176 SER177 LEU178 SER179 SER180 VAL181 VAL182 THR183 VAL184 PRO185 SER186 SER187 SER188 LEU189 GLY190 THR191 GLN192 THR193 TYR194 ILE195 CYS196 ASN197 VAL198 ASN199 HIS200 LYS201 PRO202 SER203 ASN204 THR205 LYS206 VAL207 ASP208 LYS209 ARG210 VAL211 GLU212 PRO213
Unit 3 ARG304 LYS305 ARG306 ILE307 HIS308 ILE309 GLY312 PRO313 GLY314 ARG315 ALA316 PHE317 TYR318 THR319

Ligands
Unit 4 SO4209 SO4210
Unit 5 SO4214 SO4215 SO4216

Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany