3GKE - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF DICAMBA MONOOXYGENASE
• Keywords: RIESKE CLUSTER, NON-HEME MONONUCLEAR IRON, OXYGENASE, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3GKE	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DDMC	A	340	2633	0
2	Protein	DDMC	B	334	2590	0
3	Protein	DDMC	C	314	2426	0
4	Ligand	DDMC	A	7	0	25
5	Ligand	DDMC	B	7	0	23
6	Ligand	DDMC	C	5	0	20
7	Water			851	0	851
total				1858	7649	919

Proteins

Unit 1	ALA 2 THR 3 PHE 4 VAL 5 ARG 6 ASN 7 ALA 8 TRP 9 TYR 10 VAL 11 ALA 12 ALA 13 LEU 14 PRO 15 GLU 16 GLU 17 LEU 18 SER 19 GLU 20 LYS 21 PRO 22 LEU 23 GLY 24 ARG 25 THR 26 ILE 27 LEU 28 ASP 29 THR 30 PRO 31 LEU 32 ALA 33 LEU 34 TYR 35 ARG 36 GLN 37 PRO 38 ASP 39 GLY 40 VAL 41 VAL 42 ALA 43 ALA 44 LEU 45 LEU 46 ASP 47 ILE 48 CYS 49 PRO 50 HIS 51 ARG 52 PHE 53 ALA 54 PRO 55 LEU 56 SER 57 ASP 58 GLY 59 ILE 60 LEU 61 VAL 62 ASN 63 GLY 64 HIS 65 LEU 66 GLN 67 CYS 68 PRO 69 TYR 70 HIS 71 GLY 72 LEU 73 GLU 74 PHE 75 ASP 76 GLY 77 GLY 78 GLY 79 GLN 80 CYS 81 VAL 82 HIS 83 ASN 84 PRO 85 HIS 86 GLY 87 ASN 88 GLY 89 ALA 90 ARG 91 PRO 92 ALA 93 SER 94 LEU 95 ASN 96 VAL 97 ARG 98 SER 99 PHE 100 PRO 101 VAL 102 VAL 103 GLU 104 ARG 105 ASP 106 ALA 107 LEU 108 ILE 109 TRP 110 ILE 111 TRP 112 PRO 113 GLY 114 ASP 115 PRO 116 ALA 117 LEU 118 ALA 119 ASP 120 PRO 121 GLY 122 ALA 123 ILE 124 PRO 125 ASP 126 PHE 127 GLY 128 CYS 129 ARG 130 VAL 131 ASP 132 PRO 133 ALA 134 TYR 135 ARG 136 THR 137 VAL 138 GLY 139 GLY 140 TYR 141 GLY 142 HIS 143 VAL 144 ASP 145 CYS 146 ASN 147 TYR 148 LYS 149 LEU 150 LEU 151 VAL 152 ASP 153 ASN 154 LEU 155 MET 156 ASP 157 LEU 158 GLY 159 HIS 160 ALA 161 GLN 162 TYR 163 VAL 164 HIS 165 ARG 166 ALA 167 ASN 168 ALA 169 GLN 170 THR 171 ASP 172 ALA 173 PHE 174 ASP 175 ARG 176 LEU 177 GLU 178 ARG 179 GLU 180 VAL 181 ILE 182 VAL 183 GLY 184 ASP 185 GLY 186 GLU 187 ILE 188 GLN 189 ALA 190 LEU 191 MET 192 LYS 193 ILE 194 PRO 195 GLY 196 GLY 197 THR 198 PRO 199 SER 200 VAL 201 LEU 202 MET 203 ALA 204 LYS 205 PHE 206 LEU 207 ARG 208 GLY 209 ALA 210 ASN 211 THR 212 PRO 213 VAL 214 ASP 215 ALA 216 TRP 217 ASN 218 ASP 219 ILE 220 ARG 221 TRP 222 ASN 223 LYS 224 VAL 225 SER 226 ALA 227 MET 228 LEU 229 ASN 230 PHE 231 ILE 232 ALA 233 VAL 234 ALA 235 PRO 236 GLU 237 GLY 238 THR 239 PRO 240 LYS 241 GLU 242 GLN 243 SER 244 ILE 245 HIS 246 SER 247 ARG 248 GLY 249 THR 250 HIS 251 ILE 252 LEU 253 THR 254 PRO 255 GLU 256 THR 257 GLU 258 ALA 259 SER 260 CYS 261 HIS 262 TYR 263 PHE 264 PHE 265 GLY 266 SER 267 SER 268 ARG 269 ASN 270 PHE 271 GLY 272 ILE 273 ASP 274 ASP 275 PRO 276 GLU 277 MET 278 ASP 279 GLY 280 VAL 281 LEU 282 ARG 283 SER 284 TRP 285 GLN 286 ALA 287 GLN 288 ALA 289 LEU 290 VAL 291 LYS 292 GLU 293 ASP 294 LYS 295 VAL 296 VAL 297 VAL 298 GLU 299 ALA 300 ILE 301 GLU 302 ARG 303 ARG 304 ARG 305 ALA 306 TYR 307 VAL 308 GLU 309 ALA 310 ASN 311 GLY 312 ILE 313 ARG 314 PRO 315 ALA 316 MET 317 LEU 318 SER 319 CYS 320 ASP 321 GLU 322 ALA 323 ALA 324 VAL 325 ARG 326 VAL 327 SER 328 ARG 329 GLU 330 ILE 331 GLU 332 LYS 333 LEU 334 GLU 335 GLN 336 LEU 337 GLU 338 ALA 339 ALA 340 ARG 341
Unit 2	ALA 2 THR 3 PHE 4 VAL 5 ARG 6 ASN 7 ALA 8 TRP 9 TYR 10 VAL 11 ALA 12 ALA 13 LEU 14 PRO 15 GLU 16 GLU 17 LEU 18 SER 19 GLU 20 LYS 21 PRO 22 LEU 23 GLY 24 ARG 25 THR 26 ILE 27 LEU 28 ASP 29 THR 30 PRO 31 LEU 32 ALA 33 LEU 34 TYR 35 ARG 36 GLN 37 PRO 38 ASP 39 GLY 40 VAL 41 VAL 42 ALA 43 ALA 44 LEU 45 LEU 46 ASP 47 ILE 48 CYS 49 PRO 50 HIS 51 ARG 52 PHE 53 ALA 54 PRO 55 LEU 56 SER 57 ASP 58 GLY 59 ILE 60 LEU 61 VAL 62 ASN 63 GLY 64 HIS 65 LEU 66 GLN 67 CYS 68 PRO 69 TYR 70 HIS 71 GLY 72 LEU 73 GLU 74 PHE 75 ASP 76 GLY 77 GLY 78 GLY 79 GLN 80 CYS 81 VAL 82 HIS 83 ASN 84 PRO 85 HIS 86 GLY 87 ASN 88 GLY 89 ALA 90 ARG 91 PRO 92 ALA 93 SER 94 LEU 95 ASN 96 VAL 97 ARG 98 SER 99 PHE 100 PRO 101 VAL 102 VAL 103 GLU 104 ARG 105 ASP 106 ALA 107 LEU 108 ILE 109 TRP 110 ILE 111 TRP 112 PRO 113 GLY 114 ASP 115 PRO 116 ALA 117 LEU 118 ALA 119 ASP 120 PRO 121 GLY 122 ALA 123 ILE 124 PRO 125 ASP 126 PHE 127 GLY 128 CYS 129 ARG 130 VAL 131 ASP 132 PRO 133 ALA 134 TYR 135 ARG 136 THR 137 VAL 138 GLY 139 GLY 140 TYR 141 GLY 142 HIS 143 VAL 144 ASP 145 CYS 146 ASN 147 TYR 148 LYS 149 LEU 150 LEU 151 VAL 152 ASP 153 ASN 154 LEU 155 MET 156 ASP 157 LEU 158 GLY 159 HIS 160 ALA 161 GLN 162 TYR 163 VAL 164 HIS 165 ARG 166 ALA 167 ASN 168 ALA 169 GLN 170 THR 171 ASP 172 ALA 173 PHE 174 ASP 175 ARG 176 LEU 177 GLU 178 ARG 179 GLU 180 VAL 181 ILE 182 VAL 183 GLY 184 ASP 185 GLY 186 GLU 187 ILE 188 GLN 189 ALA 190 LEU 191 MET 192 LYS 193 ILE 194 PRO 195 GLY 196 GLY 197 THR 198 PRO 199 SER 200 VAL 201 LEU 202 MET 203 ALA 204 LYS 205 PHE 206 PRO 213 VAL 214 ASP 215 ALA 216 TRP 217 ASN 218 ASP 219 ILE 220 ARG 221 TRP 222 ASN 223 LYS 224 VAL 225 SER 226 ALA 227 MET 228 LEU 229 ASN 230 PHE 231 ILE 232 ALA 233 VAL 234 ALA 235 PRO 236 GLU 237 GLY 238 THR 239 PRO 240 LYS 241 GLU 242 GLN 243 SER 244 ILE 245 HIS 246 SER 247 ARG 248 GLY 249 THR 250 HIS 251 ILE 252 LEU 253 THR 254 PRO 255 GLU 256 THR 257 GLU 258 ALA 259 SER 260 CYS 261 HIS 262 TYR 263 PHE 264 PHE 265 GLY 266 SER 267 SER 268 ARG 269 ASN 270 PHE 271 GLY 272 ILE 273 ASP 274 ASP 275 PRO 276 GLU 277 MET 278 ASP 279 GLY 280 VAL 281 LEU 282 ARG 283 SER 284 TRP 285 GLN 286 ALA 287 GLN 288 ALA 289 LEU 290 VAL 291 LYS 292 GLU 293 ASP 294 LYS 295 VAL 296 VAL 297 VAL 298 GLU 299 ALA 300 ILE 301 GLU 302 ARG 303 ARG 304 ARG 305 ALA 306 TYR 307 VAL 308 GLU 309 ALA 310 ASN 311 GLY 312 ILE 313 ARG 314 PRO 315 ALA 316 MET 317 LEU 318 SER 319 CYS 320 ASP 321 GLU 322 ALA 323 ALA 324 VAL 325 ARG 326 VAL 327 SER 328 ARG 329 GLU 330 ILE 331 GLU 332 LYS 333 LEU 334 GLU 335 GLN 336 LEU 337 GLU 338 ALA 339 ALA 340 ARG 341
Unit 3	ALA 2 THR 3 PHE 4 VAL 5 ARG 6 ASN 7 ALA 8 TRP 9 TYR 10 VAL 11 ALA 12 ALA 13 LEU 14 PRO 15 GLU 16 GLU 17 LEU 18 SER 19 GLU 20 LYS 21 PRO 22 LEU 23 GLY 24 ARG 25 THR 26 ILE 27 LEU 28 ASP 29 THR 30 PRO 31 LEU 32 ALA 33 LEU 34 TYR 35 ARG 36 GLN 37 PRO 38 ASP 39 GLY 40 VAL 41 VAL 42 ALA 43 ALA 44 LEU 45 LEU 46 ASP 47 ILE 48 CYS 49 PRO 50 HIS 51 ARG 52 PHE 53 ALA 54 PRO 55 LEU 56 SER 57 ASP 58 GLY 59 ILE 60 LEU 61 VAL 62 ASN 63 GLY 64 HIS 65 LEU 66 GLN 67 CYS 68 PRO 69 TYR 70 HIS 71 GLY 72 LEU 73 GLU 74 PHE 75 ASP 76 GLY 77 GLY 78 GLY 79 GLN 80 CYS 81 VAL 82 HIS 83 ASN 84 PRO 85 HIS 86 GLY 87 ASN 88 GLY 89 ALA 90 ARG 91 PRO 92 ALA 93 SER 94 LEU 95 ASN 96 VAL 97 ARG 98 SER 99 PHE 100 PRO 101 VAL 102 VAL 103 GLU 104 ARG 105 ASP 106 ALA 107 LEU 108 ILE 109 TRP 110 ILE 111 TRP 112 PRO 113 GLY 114 ASP 115 PRO 116 ALA 117 LEU 118 ALA 119 ASP 120 PRO 121 GLY 122 ALA 123 ILE 124 PRO 125 ASP 126 PHE 127 GLY 128 CYS 129 ARG 130 VAL 131 ASP 132 PRO 133 ALA 134 TYR 135 ARG 136 THR 137 VAL 138 GLY 139 GLY 140 TYR 141 GLY 142 HIS 143 VAL 144 ASP 145 CYS 146 ASN 147 TYR 148 LYS 149 LEU 150 LEU 151 VAL 152 ASP 153 ASN 154 LEU 155 MET 156 ASP 157 GLU 178 ARG 179 GLU 180 VAL 181 ILE 182 VAL 183 GLY 184 ASP 185 GLY 186 GLU 187 ILE 188 GLN 189 ALA 190 LEU 191 MET 192 LYS 193 ILE 194 PRO 195 GLY 196 GLY 197 THR 198 PRO 199 SER 200 VAL 201 LEU 202 MET 203 ALA 204 LYS 205 PHE 206 LEU 207 PRO 213 VAL 214 ASP 215 ALA 216 TRP 217 ASN 218 ASP 219 ILE 220 ARG 221 TRP 222 ASN 223 LYS 224 VAL 225 SER 226 ALA 227 MET 228 LEU 229 ASN 230 PHE 231 ILE 232 ALA 233 VAL 234 ALA 235 PRO 236 GLU 237 GLY 238 THR 239 PRO 240 LYS 241 GLU 242 GLN 243 SER 244 ILE 245 HIS 246 SER 247 ARG 248 GLY 249 THR 250 HIS 251 ILE 252 LEU 253 THR 254 PRO 255 GLU 256 THR 257 GLU 258 ALA 259 SER 260 CYS 261 HIS 262 TYR 263 PHE 264 PHE 265 GLY 266 SER 267 SER 268 ARG 269 ASN 270 PHE 271 GLY 272 ILE 273 ASP 274 ASP 275 PRO 276 GLU 277 MET 278 ASP 279 GLY 280 VAL 281 LEU 282 ARG 283 SER 284 TRP 285 GLN 286 ALA 287 GLN 288 ALA 289 LEU 290 VAL 291 LYS 292 GLU 293 ASP 294 LYS 295 VAL 296 VAL 297 VAL 298 GLU 299 ALA 300 ILE 301 GLU 302 ARG 303 ARG 304 ARG 305 ALA 306 TYR 307 VAL 308 GLU 309 ALA 310 ASN 311 GLY 312 ILE 313 ARG 314 PRO 315 ALA 316 MET 317 LEU 318 SER 319 CYS 320 ASP 321 GLU 322 ALA 323 ALA 324 VAL 325 ARG 326 VAL 327 SER 328 ARG 329 GLU 330 ILE 331 GLU 332 LYS 333 LEU 334 GLU 335 GLN 336 LEU 337 GLU 338 ALA 339 ALA 340

Ligands

Unit 4	EDO 350 EDO 351 EDO 352 ACT 353 ACT 354 FES 500 FE 501
Unit 5	EDO 350 EDO 351 EDO 352 FES 500 FE 501 OXY 600 ACT 700
Unit 6	EDO 350 EDO 351 EDO 352 ACT 353 FES 500