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Title | CRYSTAL STRUCTURE OF THE OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE FROM SACCHAROMYCES CEREVISIAE | |
Keywords | OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE, SACCHAROMYCES CEREVISIAE, CRYSTAL STRUCTURE, DECARBOXYLASE, LYASE, PHOSPHOPROTEIN, PYRIMIDINE BIOSYNTHESIS, UBL CONJUGATION | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3GDK | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | OROTIDINE 5'-PHOSPHATE DECARBOXYLASE | A | 260 | 2003 | 0 |
2 | Protein | OROTIDINE 5'-PHOSPHATE DECARBOXYLASE | B | 260 | 2003 | 0 |
3 | Protein | OROTIDINE 5'-PHOSPHATE DECARBOXYLASE | C | 252 | 1939 | 0 |
4 | Protein | OROTIDINE 5'-PHOSPHATE DECARBOXYLASE | D | 252 | 1939 | 0 |
5 | Water | 426 | 0 | 426 | ||
total | 1450 | 7884 | 426 |
Unit 1 | LYS3 ALA4 THR5 TYR6 LYS7 GLU8 ARG9 ALA10 ALA11 THR12 HIS13 PRO14 SER15 PRO16 VAL17 ALA18 ALA19 LYS20 LEU21 PHE22 ASN23 ILE24 MET25 HIS26 GLU27 LYS28 GLN29 THR30 ASN31 LEU32 CYS33 ALA34 SER35 LEU36 ASP37 VAL38 ARG39 THR40 THR41 LYS42 GLU43 LEU44 LEU45 GLU46 LEU47 VAL48 GLU49 ALA50 LEU51 GLY52 PRO53 LYS54 ILE55 CYS56 LEU57 LEU58 LYS59 THR60 HIS61 VAL62 ASP63 ILE64 LEU65 THR66 ASP67 PHE68 SER69 MET70 GLU71 GLY72 THR73 VAL74 LYS75 PRO76 LEU77 LYS78 ALA79 LEU80 SER81 ALA82 LYS83 TYR84 ASN85 PHE86 LEU87 LEU88 PHE89 GLU90 ASP91 ARG92 LYS93 PHE94 ALA95 ASP96 ILE97 GLY98 ASN99 THR100 VAL101 LYS102 LEU103 GLN104 TYR105 SER106 ALA107 GLY108 VAL109 TYR110 ARG111 ILE112 ALA113 GLU114 TRP115 ALA116 ASP117 ILE118 THR119 ASN120 ALA121 HIS122 GLY123 VAL124 VAL125 GLY126 PRO127 GLY128 ILE129 VAL130 SER131 GLY132 LEU133 LYS134 GLN135 ALA136 ALA137 GLU138 GLU139 VAL140 THR141 LYS142 GLU143 PRO144 ARG145 GLY146 LEU147 LEU148 MET149 LEU150 ALA151 GLU152 LEU153 SER154 CYS155 LYS156 GLY157 SER158 LEU159 ALA160 THR161 GLY162 GLU163 TYR164 THR165 LYS166 GLY167 THR168 VAL169 ASP170 ILE171 ALA172 LYS173 SER174 ASP175 LYS176 ASP177 PHE178 VAL179 ILE180 GLY181 PHE182 ILE183 ALA184 GLN185 ARG186 ASP187 MET188 GLY189 GLY190 ARG191 ASP192 GLU193 GLY194 TYR195 ASP196 TRP197 LEU198 ILE199 MET200 THR201 PRO202 GLY203 VAL204 GLY205 LEU206 ASP207 ASP208 LYS209 GLY210 ASP211 ALA212 LEU213 GLY214 GLN215 GLN216 TYR217 ARG218 THR219 VAL220 ASP221 ASP222 VAL223 VAL224 SER225 THR226 GLY227 SER228 ASP229 ILE230 ILE231 ILE232 VAL233 GLY234 ARG235 GLY236 LEU237 PHE238 ALA239 LYS240 GLY241 ARG242 ASP243 ALA244 LYS245 VAL246 GLU247 GLY248 GLU249 ARG250 TYR251 ARG252 LYS253 ALA254 GLY255 TRP256 GLU257 ALA258 TYR259 LEU260 ARG261 ARG262 |
Unit 2 | LYS3 ALA4 THR5 TYR6 LYS7 GLU8 ARG9 ALA10 ALA11 THR12 HIS13 PRO14 SER15 PRO16 VAL17 ALA18 ALA19 LYS20 LEU21 PHE22 ASN23 ILE24 MET25 HIS26 GLU27 LYS28 GLN29 THR30 ASN31 LEU32 CYS33 ALA34 SER35 LEU36 ASP37 VAL38 ARG39 THR40 THR41 LYS42 GLU43 LEU44 LEU45 GLU46 LEU47 VAL48 GLU49 ALA50 LEU51 GLY52 PRO53 LYS54 ILE55 CYS56 LEU57 LEU58 LYS59 THR60 HIS61 VAL62 ASP63 ILE64 LEU65 THR66 ASP67 PHE68 SER69 MET70 GLU71 GLY72 THR73 VAL74 LYS75 PRO76 LEU77 LYS78 ALA79 LEU80 SER81 ALA82 LYS83 TYR84 ASN85 PHE86 LEU87 LEU88 PHE89 GLU90 ASP91 ARG92 LYS93 PHE94 ALA95 ASP96 ILE97 GLY98 ASN99 THR100 VAL101 LYS102 LEU103 GLN104 TYR105 SER106 ALA107 GLY108 VAL109 TYR110 ARG111 ILE112 ALA113 GLU114 TRP115 ALA116 ASP117 ILE118 THR119 ASN120 ALA121 HIS122 GLY123 VAL124 VAL125 GLY126 PRO127 GLY128 ILE129 VAL130 SER131 GLY132 LEU133 LYS134 GLN135 ALA136 ALA137 GLU138 GLU139 VAL140 THR141 LYS142 GLU143 PRO144 ARG145 GLY146 LEU147 LEU148 MET149 LEU150 ALA151 GLU152 LEU153 SER154 CYS155 LYS156 GLY157 SER158 LEU159 ALA160 THR161 GLY162 GLU163 TYR164 THR165 LYS166 GLY167 THR168 VAL169 ASP170 ILE171 ALA172 LYS173 SER174 ASP175 LYS176 ASP177 PHE178 VAL179 ILE180 GLY181 PHE182 ILE183 ALA184 GLN185 ARG186 ASP187 MET188 GLY189 GLY190 ARG191 ASP192 GLU193 GLY194 TYR195 ASP196 TRP197 LEU198 ILE199 MET200 THR201 PRO202 GLY203 VAL204 GLY205 LEU206 ASP207 ASP208 LYS209 GLY210 ASP211 ALA212 LEU213 GLY214 GLN215 GLN216 TYR217 ARG218 THR219 VAL220 ASP221 ASP222 VAL223 VAL224 SER225 THR226 GLY227 SER228 ASP229 ILE230 ILE231 ILE232 VAL233 GLY234 ARG235 GLY236 LEU237 PHE238 ALA239 LYS240 GLY241 ARG242 ASP243 ALA244 LYS245 VAL246 GLU247 GLY248 GLU249 ARG250 TYR251 ARG252 LYS253 ALA254 GLY255 TRP256 GLU257 ALA258 TYR259 LEU260 ARG261 ARG262 |
Unit 3 | LYS3 ALA4 THR5 TYR6 LYS7 GLU8 ARG9 ALA10 ALA11 THR12 HIS13 PRO14 SER15 PRO16 VAL17 ALA18 ALA19 LYS20 LEU21 PHE22 ASN23 ILE24 MET25 HIS26 GLU27 LYS28 GLN29 THR30 ASN31 LEU32 CYS33 ALA34 SER35 LEU36 ASP37 VAL38 ARG39 THR40 THR41 LYS42 GLU43 LEU44 LEU45 GLU46 LEU47 VAL48 GLU49 ALA50 LEU51 GLY52 PRO53 LYS54 ILE55 CYS56 LEU57 LEU58 LYS59 THR60 HIS61 VAL62 ASP63 ILE64 LEU65 THR66 ASP67 PHE68 SER69 MET70 GLU71 GLY72 THR73 VAL74 LYS75 PRO76 LEU77 LYS78 ALA79 LEU80 SER81 ALA82 LYS83 TYR84 ASN85 PHE86 LEU87 LEU88 PHE89 GLU90 ASP91 ARG92 LYS93 PHE94 ALA95 ASP96 ILE97 GLY98 ASN99 THR100 VAL101 LYS102 LEU103 GLN104 TYR105 SER106 ALA107 GLY108 VAL109 TYR110 ARG111 ILE112 ALA113 GLU114 TRP115 ALA116 ASP117 ILE118 THR119 ASN120 ALA121 HIS122 GLY123 VAL124 VAL125 GLY126 PRO127 GLY128 ILE129 VAL130 SER131 GLY132 LEU133 LYS134 GLN135 ALA136 ALA137 GLU138 GLU139 VAL140 THR141 LYS142 GLU143 PRO144 ARG145 GLY146 LEU147 LEU148 MET149 LEU150 ALA151 GLU152 LEU153 SER154 CYS155 LYS156 GLY157 SER158 LEU159 ALA160 THR161 GLY162 GLU163 TYR164 THR165 LYS166 GLY167 THR168 VAL169 ASP170 ILE171 ALA172 LYS173 SER174 ASP175 LYS176 ASP177 PHE178 VAL179 ILE180 GLY181 PHE182 ILE183 ALA184 GLN185 ARG186 ASP187 MET188 GLY189 GLY190 ARG191 ASP192 GLU193 GLY194 TYR195 ASP196 TRP197 LEU198 ILE199 MET200 THR201 PRO202 GLY203 VAL204 GLY205 ARG218 THR219 VAL220 ASP221 ASP222 VAL223 VAL224 SER225 THR226 GLY227 SER228 ASP229 ILE230 ILE231 ILE232 VAL233 GLY234 ARG235 GLY236 LEU237 PHE238 ALA239 LYS240 GLY241 ARG242 ASP243 ALA244 LYS245 VAL246 GLU247 GLY248 GLU249 ARG250 TYR251 ARG252 LYS253 ALA254 GLY255 TRP256 GLU257 ALA258 TYR259 LEU260 ARG261 ARG262 CYS263 GLY264 GLN265 GLN266 |
Unit 4 | LYS3 ALA4 THR5 TYR6 LYS7 GLU8 ARG9 ALA10 ALA11 THR12 HIS13 PRO14 SER15 PRO16 VAL17 ALA18 ALA19 LYS20 LEU21 PHE22 ASN23 ILE24 MET25 HIS26 GLU27 LYS28 GLN29 THR30 ASN31 LEU32 CYS33 ALA34 SER35 LEU36 ASP37 VAL38 ARG39 THR40 THR41 LYS42 GLU43 LEU44 LEU45 GLU46 LEU47 VAL48 GLU49 ALA50 LEU51 GLY52 PRO53 LYS54 ILE55 CYS56 LEU57 LEU58 LYS59 THR60 HIS61 VAL62 ASP63 ILE64 LEU65 THR66 ASP67 PHE68 SER69 MET70 GLU71 GLY72 THR73 VAL74 LYS75 PRO76 LEU77 LYS78 ALA79 LEU80 SER81 ALA82 LYS83 TYR84 ASN85 PHE86 LEU87 LEU88 PHE89 GLU90 ASP91 ARG92 LYS93 PHE94 ALA95 ASP96 ILE97 GLY98 ASN99 THR100 VAL101 LYS102 LEU103 GLN104 TYR105 SER106 ALA107 GLY108 VAL109 TYR110 ARG111 ILE112 ALA113 GLU114 TRP115 ALA116 ASP117 ILE118 THR119 ASN120 ALA121 HIS122 GLY123 VAL124 VAL125 GLY126 PRO127 GLY128 ILE129 VAL130 SER131 GLY132 LEU133 LYS134 GLN135 ALA136 ALA137 GLU138 GLU139 VAL140 THR141 LYS142 GLU143 PRO144 ARG145 GLY146 LEU147 LEU148 MET149 LEU150 ALA151 GLU152 LEU153 SER154 CYS155 LYS156 GLY157 SER158 LEU159 ALA160 THR161 GLY162 GLU163 TYR164 THR165 LYS166 GLY167 THR168 VAL169 ASP170 ILE171 ALA172 LYS173 SER174 ASP175 LYS176 ASP177 PHE178 VAL179 ILE180 GLY181 PHE182 ILE183 ALA184 GLN185 ARG186 ASP187 MET188 GLY189 GLY190 ARG191 ASP192 GLU193 GLY194 TYR195 ASP196 TRP197 LEU198 ILE199 MET200 THR201 PRO202 GLY203 VAL204 GLY205 ARG218 THR219 VAL220 ASP221 ASP222 VAL223 VAL224 SER225 THR226 GLY227 SER228 ASP229 ILE230 ILE231 ILE232 VAL233 GLY234 ARG235 GLY236 LEU237 PHE238 ALA239 LYS240 GLY241 ARG242 ASP243 ALA244 LYS245 VAL246 GLU247 GLY248 GLU249 ARG250 TYR251 ARG252 LYS253 ALA254 GLY255 TRP256 GLU257 ALA258 TYR259 LEU260 ARG261 ARG262 CYS263 GLY264 GLN265 GLN266 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |