3GDG - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE NADP-DEPENDENT MANNITOL DEHYDROGENA CLADOSPORIUM HERBARUM.
• Keywords: ROSSMANN FOLD, BETA-ALPHA-BETA MOTIFS, OPEN TWISTED SHEET, A NADP, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3GDG	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PROBABLE NADP-DEPENDENT MANNITOL DEHYDROGENASE	A	267	1998	0
2	Protein	PROBABLE NADP-DEPENDENT MANNITOL DEHYDROGENASE	B	267	1998	0
3	Protein	PROBABLE NADP-DEPENDENT MANNITOL DEHYDROGENASE	C	267	1998	0
4	Protein	PROBABLE NADP-DEPENDENT MANNITOL DEHYDROGENASE	D	267	1998	0
5	Ligand	PROBABLE NADP-DEPENDENT MANNITOL DEHYDROGENASE	A	1	0	1
6	Ligand	PROBABLE NADP-DEPENDENT MANNITOL DEHYDROGENASE	B	1	0	1
7	Water			695	0	695
total				1765	7992	697

Proteins

Unit 1	MET 1 PRO 2 GLY 3 GLN 4 GLN 5 ALA 6 THR 7 LYS 8 HIS 9 GLU 10 SER 11 LEU 12 LEU 13 ASP 14 GLN 15 LEU 16 SER 17 LEU 18 LYS 19 GLY 20 LYS 21 VAL 22 VAL 23 VAL 24 VAL 25 THR 26 GLY 27 ALA 28 SER 29 GLY 30 PRO 31 LYS 32 GLY 33 MET 34 GLY 35 ILE 36 GLU 37 ALA 38 ALA 39 ARG 40 GLY 41 CYS 42 ALA 43 GLU 44 MET 45 GLY 46 ALA 47 ALA 48 VAL 49 ALA 50 ILE 51 THR 52 TYR 53 ALA 54 SER 55 ARG 56 ALA 57 GLN 58 GLY 59 ALA 60 GLU 61 GLU 62 ASN 63 VAL 64 LYS 65 GLU 66 LEU 67 GLU 68 LYS 69 THR 70 TYR 71 GLY 72 ILE 73 LYS 74 ALA 75 LYS 76 ALA 77 TYR 78 LYS 79 CYS 80 GLN 81 VAL 82 ASP 83 SER 84 TYR 85 GLU 86 SER 87 CYS 88 GLU 89 LYS 90 LEU 91 VAL 92 LYS 93 ASP 94 VAL 95 VAL 96 ALA 97 ASP 98 PHE 99 GLY 100 GLN 101 ILE 102 ASP 103 ALA 104 PHE 105 ILE 106 ALA 107 ASN 108 ALA 109 GLY 110 ALA 111 THR 112 ALA 113 ASP 114 SER 115 GLY 116 ILE 117 LEU 118 ASP 119 GLY 120 SER 121 VAL 122 GLU 123 ALA 124 TRP 125 ASN 126 HIS 127 VAL 128 VAL 129 GLN 130 VAL 131 ASP 132 LEU 133 ASN 134 GLY 135 THR 136 PHE 137 HIS 138 CYS 139 ALA 140 LYS 141 ALA 142 VAL 143 GLY 144 HIS 145 HIS 146 PHE 147 LYS 148 GLU 149 ARG 150 GLY 151 THR 152 GLY 153 SER 154 LEU 155 VAL 156 ILE 157 THR 158 ALA 159 SER 160 MET 161 SER 162 GLY 163 HIS 164 ILE 165 ALA 166 ASN 167 PHE 168 PRO 169 GLN 170 GLU 171 GLN 172 THR 173 SER 174 TYR 175 ASN 176 VAL 177 ALA 178 LYS 179 ALA 180 GLY 181 CYS 182 ILE 183 HIS 184 MET 185 ALA 186 ARG 187 SER 188 LEU 189 ALA 190 ASN 191 GLU 192 TRP 193 ARG 194 ASP 195 PHE 196 ALA 197 ARG 198 VAL 199 ASN 200 SER 201 ILE 202 SER 203 PRO 204 GLY 205 TYR 206 ILE 207 ASP 208 THR 209 GLY 210 LEU 211 SER 212 ASP 213 PHE 214 VAL 215 PRO 216 LYS 217 GLU 218 THR 219 GLN 220 GLN 221 LEU 222 TRP 223 HIS 224 SER 225 MET 226 ILE 227 PRO 228 MET 229 GLY 230 ARG 231 ASP 232 GLY 233 LEU 234 ALA 235 LYS 236 GLU 237 LEU 238 LYS 239 GLY 240 ALA 241 TYR 242 VAL 243 TYR 244 PHE 245 ALA 246 SER 247 ASP 248 ALA 249 SER 250 THR 251 TYR 252 THR 253 THR 254 GLY 255 ALA 256 ASP 257 LEU 258 LEU 259 ILE 260 ASP 261 GLY 262 GLY 263 TYR 264 THR 265 THR 266 ARG 267
Unit 2	MET 1 PRO 2 GLY 3 GLN 4 GLN 5 ALA 6 THR 7 LYS 8 HIS 9 GLU 10 SER 11 LEU 12 LEU 13 ASP 14 GLN 15 LEU 16 SER 17 LEU 18 LYS 19 GLY 20 LYS 21 VAL 22 VAL 23 VAL 24 VAL 25 THR 26 GLY 27 ALA 28 SER 29 GLY 30 PRO 31 LYS 32 GLY 33 MET 34 GLY 35 ILE 36 GLU 37 ALA 38 ALA 39 ARG 40 GLY 41 CYS 42 ALA 43 GLU 44 MET 45 GLY 46 ALA 47 ALA 48 VAL 49 ALA 50 ILE 51 THR 52 TYR 53 ALA 54 SER 55 ARG 56 ALA 57 GLN 58 GLY 59 ALA 60 GLU 61 GLU 62 ASN 63 VAL 64 LYS 65 GLU 66 LEU 67 GLU 68 LYS 69 THR 70 TYR 71 GLY 72 ILE 73 LYS 74 ALA 75 LYS 76 ALA 77 TYR 78 LYS 79 CYS 80 GLN 81 VAL 82 ASP 83 SER 84 TYR 85 GLU 86 SER 87 CYS 88 GLU 89 LYS 90 LEU 91 VAL 92 LYS 93 ASP 94 VAL 95 VAL 96 ALA 97 ASP 98 PHE 99 GLY 100 GLN 101 ILE 102 ASP 103 ALA 104 PHE 105 ILE 106 ALA 107 ASN 108 ALA 109 GLY 110 ALA 111 THR 112 ALA 113 ASP 114 SER 115 GLY 116 ILE 117 LEU 118 ASP 119 GLY 120 SER 121 VAL 122 GLU 123 ALA 124 TRP 125 ASN 126 HIS 127 VAL 128 VAL 129 GLN 130 VAL 131 ASP 132 LEU 133 ASN 134 GLY 135 THR 136 PHE 137 HIS 138 CYS 139 ALA 140 LYS 141 ALA 142 VAL 143 GLY 144 HIS 145 HIS 146 PHE 147 LYS 148 GLU 149 ARG 150 GLY 151 THR 152 GLY 153 SER 154 LEU 155 VAL 156 ILE 157 THR 158 ALA 159 SER 160 MET 161 SER 162 GLY 163 HIS 164 ILE 165 ALA 166 ASN 167 PHE 168 PRO 169 GLN 170 GLU 171 GLN 172 THR 173 SER 174 TYR 175 ASN 176 VAL 177 ALA 178 LYS 179 ALA 180 GLY 181 CYS 182 ILE 183 HIS 184 MET 185 ALA 186 ARG 187 SER 188 LEU 189 ALA 190 ASN 191 GLU 192 TRP 193 ARG 194 ASP 195 PHE 196 ALA 197 ARG 198 VAL 199 ASN 200 SER 201 ILE 202 SER 203 PRO 204 GLY 205 TYR 206 ILE 207 ASP 208 THR 209 GLY 210 LEU 211 SER 212 ASP 213 PHE 214 VAL 215 PRO 216 LYS 217 GLU 218 THR 219 GLN 220 GLN 221 LEU 222 TRP 223 HIS 224 SER 225 MET 226 ILE 227 PRO 228 MET 229 GLY 230 ARG 231 ASP 232 GLY 233 LEU 234 ALA 235 LYS 236 GLU 237 LEU 238 LYS 239 GLY 240 ALA 241 TYR 242 VAL 243 TYR 244 PHE 245 ALA 246 SER 247 ASP 248 ALA 249 SER 250 THR 251 TYR 252 THR 253 THR 254 GLY 255 ALA 256 ASP 257 LEU 258 LEU 259 ILE 260 ASP 261 GLY 262 GLY 263 TYR 264 THR 265 THR 266 ARG 267
Unit 3	MET 1 PRO 2 GLY 3 GLN 4 GLN 5 ALA 6 THR 7 LYS 8 HIS 9 GLU 10 SER 11 LEU 12 LEU 13 ASP 14 GLN 15 LEU 16 SER 17 LEU 18 LYS 19 GLY 20 LYS 21 VAL 22 VAL 23 VAL 24 VAL 25 THR 26 GLY 27 ALA 28 SER 29 GLY 30 PRO 31 LYS 32 GLY 33 MET 34 GLY 35 ILE 36 GLU 37 ALA 38 ALA 39 ARG 40 GLY 41 CYS 42 ALA 43 GLU 44 MET 45 GLY 46 ALA 47 ALA 48 VAL 49 ALA 50 ILE 51 THR 52 TYR 53 ALA 54 SER 55 ARG 56 ALA 57 GLN 58 GLY 59 ALA 60 GLU 61 GLU 62 ASN 63 VAL 64 LYS 65 GLU 66 LEU 67 GLU 68 LYS 69 THR 70 TYR 71 GLY 72 ILE 73 LYS 74 ALA 75 LYS 76 ALA 77 TYR 78 LYS 79 CYS 80 GLN 81 VAL 82 ASP 83 SER 84 TYR 85 GLU 86 SER 87 CYS 88 GLU 89 LYS 90 LEU 91 VAL 92 LYS 93 ASP 94 VAL 95 VAL 96 ALA 97 ASP 98 PHE 99 GLY 100 GLN 101 ILE 102 ASP 103 ALA 104 PHE 105 ILE 106 ALA 107 ASN 108 ALA 109 GLY 110 ALA 111 THR 112 ALA 113 ASP 114 SER 115 GLY 116 ILE 117 LEU 118 ASP 119 GLY 120 SER 121 VAL 122 GLU 123 ALA 124 TRP 125 ASN 126 HIS 127 VAL 128 VAL 129 GLN 130 VAL 131 ASP 132 LEU 133 ASN 134 GLY 135 THR 136 PHE 137 HIS 138 CYS 139 ALA 140 LYS 141 ALA 142 VAL 143 GLY 144 HIS 145 HIS 146 PHE 147 LYS 148 GLU 149 ARG 150 GLY 151 THR 152 GLY 153 SER 154 LEU 155 VAL 156 ILE 157 THR 158 ALA 159 SER 160 MET 161 SER 162 GLY 163 HIS 164 ILE 165 ALA 166 ASN 167 PHE 168 PRO 169 GLN 170 GLU 171 GLN 172 THR 173 SER 174 TYR 175 ASN 176 VAL 177 ALA 178 LYS 179 ALA 180 GLY 181 CYS 182 ILE 183 HIS 184 MET 185 ALA 186 ARG 187 SER 188 LEU 189 ALA 190 ASN 191 GLU 192 TRP 193 ARG 194 ASP 195 PHE 196 ALA 197 ARG 198 VAL 199 ASN 200 SER 201 ILE 202 SER 203 PRO 204 GLY 205 TYR 206 ILE 207 ASP 208 THR 209 GLY 210 LEU 211 SER 212 ASP 213 PHE 214 VAL 215 PRO 216 LYS 217 GLU 218 THR 219 GLN 220 GLN 221 LEU 222 TRP 223 HIS 224 SER 225 MET 226 ILE 227 PRO 228 MET 229 GLY 230 ARG 231 ASP 232 GLY 233 LEU 234 ALA 235 LYS 236 GLU 237 LEU 238 LYS 239 GLY 240 ALA 241 TYR 242 VAL 243 TYR 244 PHE 245 ALA 246 SER 247 ASP 248 ALA 249 SER 250 THR 251 TYR 252 THR 253 THR 254 GLY 255 ALA 256 ASP 257 LEU 258 LEU 259 ILE 260 ASP 261 GLY 262 GLY 263 TYR 264 THR 265 THR 266 ARG 267
Unit 4	MET 1 PRO 2 GLY 3 GLN 4 GLN 5 ALA 6 THR 7 LYS 8 HIS 9 GLU 10 SER 11 LEU 12 LEU 13 ASP 14 GLN 15 LEU 16 SER 17 LEU 18 LYS 19 GLY 20 LYS 21 VAL 22 VAL 23 VAL 24 VAL 25 THR 26 GLY 27 ALA 28 SER 29 GLY 30 PRO 31 LYS 32 GLY 33 MET 34 GLY 35 ILE 36 GLU 37 ALA 38 ALA 39 ARG 40 GLY 41 CYS 42 ALA 43 GLU 44 MET 45 GLY 46 ALA 47 ALA 48 VAL 49 ALA 50 ILE 51 THR 52 TYR 53 ALA 54 SER 55 ARG 56 ALA 57 GLN 58 GLY 59 ALA 60 GLU 61 GLU 62 ASN 63 VAL 64 LYS 65 GLU 66 LEU 67 GLU 68 LYS 69 THR 70 TYR 71 GLY 72 ILE 73 LYS 74 ALA 75 LYS 76 ALA 77 TYR 78 LYS 79 CYS 80 GLN 81 VAL 82 ASP 83 SER 84 TYR 85 GLU 86 SER 87 CYS 88 GLU 89 LYS 90 LEU 91 VAL 92 LYS 93 ASP 94 VAL 95 VAL 96 ALA 97 ASP 98 PHE 99 GLY 100 GLN 101 ILE 102 ASP 103 ALA 104 PHE 105 ILE 106 ALA 107 ASN 108 ALA 109 GLY 110 ALA 111 THR 112 ALA 113 ASP 114 SER 115 GLY 116 ILE 117 LEU 118 ASP 119 GLY 120 SER 121 VAL 122 GLU 123 ALA 124 TRP 125 ASN 126 HIS 127 VAL 128 VAL 129 GLN 130 VAL 131 ASP 132 LEU 133 ASN 134 GLY 135 THR 136 PHE 137 HIS 138 CYS 139 ALA 140 LYS 141 ALA 142 VAL 143 GLY 144 HIS 145 HIS 146 PHE 147 LYS 148 GLU 149 ARG 150 GLY 151 THR 152 GLY 153 SER 154 LEU 155 VAL 156 ILE 157 THR 158 ALA 159 SER 160 MET 161 SER 162 GLY 163 HIS 164 ILE 165 ALA 166 ASN 167 PHE 168 PRO 169 GLN 170 GLU 171 GLN 172 THR 173 SER 174 TYR 175 ASN 176 VAL 177 ALA 178 LYS 179 ALA 180 GLY 181 CYS 182 ILE 183 HIS 184 MET 185 ALA 186 ARG 187 SER 188 LEU 189 ALA 190 ASN 191 GLU 192 TRP 193 ARG 194 ASP 195 PHE 196 ALA 197 ARG 198 VAL 199 ASN 200 SER 201 ILE 202 SER 203 PRO 204 GLY 205 TYR 206 ILE 207 ASP 208 THR 209 GLY 210 LEU 211 SER 212 ASP 213 PHE 214 VAL 215 PRO 216 LYS 217 GLU 218 THR 219 GLN 220 GLN 221 LEU 222 TRP 223 HIS 224 SER 225 MET 226 ILE 227 PRO 228 MET 229 GLY 230 ARG 231 ASP 232 GLY 233 LEU 234 ALA 235 LYS 236 GLU 237 LEU 238 LYS 239 GLY 240 ALA 241 TYR 242 VAL 243 TYR 244 PHE 245 ALA 246 SER 247 ASP 248 ALA 249 SER 250 THR 251 TYR 252 THR 253 THR 254 GLY 255 ALA 256 ASP 257 LEU 258 LEU 259 ILE 260 ASP 261 GLY 262 GLY 263 TYR 264 THR 265 THR 266 ARG 267

Ligands

Unit 5	NA 1002
Unit 6	NA 1001