3G5K - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE AND ACTIVITY OF HUMAN MITOCHONDRIAL PEPTIDE DEFORM NOVEL CANCER TARGET
• Keywords: PEPTIDE DEFORMYLASE, ACTINONIN, HYDROLASE, IRON, METAL-BINDI MITOCHONDRION, PROTEIN BIOSYNTHESIS, TRANSIT PEPTIDE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3G5K	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PEPTIDE DEFORMYLASE, MITOCHONDRIAL	A	183	1445	0
2	Protein	PEPTIDE DEFORMYLASE, MITOCHONDRIAL	B	183	1445	0
3	Protein	PEPTIDE DEFORMYLASE, MITOCHONDRIAL	C	183	1445	0
4	Protein	PEPTIDE DEFORMYLASE, MITOCHONDRIAL	D	183	1445	0
5	Ligand	PEPTIDE DEFORMYLASE, MITOCHONDRIAL	A	2	0	28
6	Ligand	PEPTIDE DEFORMYLASE, MITOCHONDRIAL	B	2	0	28
7	Ligand	PEPTIDE DEFORMYLASE, MITOCHONDRIAL	C	2	0	28
8	Ligand	PEPTIDE DEFORMYLASE, MITOCHONDRIAL	D	2	0	28
9	Water			553	0	553
total				1293	5780	665

Proteins

Unit 1	HIS 3 MET 4 SER 5 PHE 6 SER 7 HIS 8 VAL 9 CYS 10 GLN 11 VAL 12 GLY 13 ASP 14 PRO 15 VAL 16 LEU 17 ARG 18 GLY 19 VAL 20 ALA 21 ALA 22 PRO 23 VAL 24 GLU 25 ARG 26 ALA 27 GLN 28 LEU 29 GLY 30 GLY 31 PRO 32 GLU 33 LEU 34 GLN 35 ARG 36 LEU 37 THR 38 GLN 39 ARG 40 LEU 41 VAL 42 GLN 43 VAL 44 MET 45 ARG 46 ARG 47 ARG 48 ARG 49 CYS 50 VAL 51 GLY 52 LEU 53 SER 54 ALA 55 PRO 56 GLN 57 LEU 58 GLY 59 VAL 60 PRO 61 ARG 62 GLN 63 VAL 64 LEU 65 ALA 66 LEU 67 GLU 68 LEU 69 PRO 70 GLU 71 ALA 72 LEU 73 CYS 74 ARG 75 GLU 76 CYS 77 PRO 78 PRO 79 ARG 80 GLN 81 ARG 82 ALA 83 LEU 84 ARG 85 GLN 86 MET 87 GLU 88 PRO 89 PHE 90 PRO 91 LEU 92 ARG 93 VAL 94 PHE 95 VAL 96 ASN 97 PRO 98 SER 99 LEU 100 ARG 101 VAL 102 LEU 103 ASP 104 SER 105 ARG 106 LEU 107 VAL 108 THR 109 PHE 110 PRO 111 GLU 112 GLY 113 CYS 114 GLU 115 SER 116 VAL 117 ALA 118 GLY 119 PHE 120 LEU 121 ALA 122 CYS 123 VAL 124 PRO 125 ARG 126 PHE 127 GLN 128 ALA 129 VAL 130 GLN 131 ILE 132 SER 133 GLY 134 LEU 135 ASP 136 PRO 137 ASN 138 GLY 139 GLU 140 GLN 141 VAL 142 VAL 143 TRP 144 GLN 145 ALA 146 SER 147 GLY 148 TRP 149 ALA 150 ALA 151 ARG 152 ILE 153 ILE 154 GLN 155 HIS 156 GLU 157 MET 158 ASP 159 HIS 160 LEU 161 GLN 162 GLY 163 CYS 164 LEU 165 PHE 166 ILE 167 ASP 168 LYS 169 MET 170 ASP 171 SER 172 ARG 173 THR 174 PHE 175 THR 176 ASN 177 VAL 178 TYR 179 TRP 180 MET 181 LYS 182 VAL 183 ASN 184 ASP 185
Unit 2	HIS 3 MET 4 SER 5 PHE 6 SER 7 HIS 8 VAL 9 CYS 10 GLN 11 VAL 12 GLY 13 ASP 14 PRO 15 VAL 16 LEU 17 ARG 18 GLY 19 VAL 20 ALA 21 ALA 22 PRO 23 VAL 24 GLU 25 ARG 26 ALA 27 GLN 28 LEU 29 GLY 30 GLY 31 PRO 32 GLU 33 LEU 34 GLN 35 ARG 36 LEU 37 THR 38 GLN 39 ARG 40 LEU 41 VAL 42 GLN 43 VAL 44 MET 45 ARG 46 ARG 47 ARG 48 ARG 49 CYS 50 VAL 51 GLY 52 LEU 53 SER 54 ALA 55 PRO 56 GLN 57 LEU 58 GLY 59 VAL 60 PRO 61 ARG 62 GLN 63 VAL 64 LEU 65 ALA 66 LEU 67 GLU 68 LEU 69 PRO 70 GLU 71 ALA 72 LEU 73 CYS 74 ARG 75 GLU 76 CYS 77 PRO 78 PRO 79 ARG 80 GLN 81 ARG 82 ALA 83 LEU 84 ARG 85 GLN 86 MET 87 GLU 88 PRO 89 PHE 90 PRO 91 LEU 92 ARG 93 VAL 94 PHE 95 VAL 96 ASN 97 PRO 98 SER 99 LEU 100 ARG 101 VAL 102 LEU 103 ASP 104 SER 105 ARG 106 LEU 107 VAL 108 THR 109 PHE 110 PRO 111 GLU 112 GLY 113 CYS 114 GLU 115 SER 116 VAL 117 ALA 118 GLY 119 PHE 120 LEU 121 ALA 122 CYS 123 VAL 124 PRO 125 ARG 126 PHE 127 GLN 128 ALA 129 VAL 130 GLN 131 ILE 132 SER 133 GLY 134 LEU 135 ASP 136 PRO 137 ASN 138 GLY 139 GLU 140 GLN 141 VAL 142 VAL 143 TRP 144 GLN 145 ALA 146 SER 147 GLY 148 TRP 149 ALA 150 ALA 151 ARG 152 ILE 153 ILE 154 GLN 155 HIS 156 GLU 157 MET 158 ASP 159 HIS 160 LEU 161 GLN 162 GLY 163 CYS 164 LEU 165 PHE 166 ILE 167 ASP 168 LYS 169 MET 170 ASP 171 SER 172 ARG 173 THR 174 PHE 175 THR 176 ASN 177 VAL 178 TYR 179 TRP 180 MET 181 LYS 182 VAL 183 ASN 184 ASP 185
Unit 3	HIS 3 MET 4 SER 5 PHE 6 SER 7 HIS 8 VAL 9 CYS 10 GLN 11 VAL 12 GLY 13 ASP 14 PRO 15 VAL 16 LEU 17 ARG 18 GLY 19 VAL 20 ALA 21 ALA 22 PRO 23 VAL 24 GLU 25 ARG 26 ALA 27 GLN 28 LEU 29 GLY 30 GLY 31 PRO 32 GLU 33 LEU 34 GLN 35 ARG 36 LEU 37 THR 38 GLN 39 ARG 40 LEU 41 VAL 42 GLN 43 VAL 44 MET 45 ARG 46 ARG 47 ARG 48 ARG 49 CYS 50 VAL 51 GLY 52 LEU 53 SER 54 ALA 55 PRO 56 GLN 57 LEU 58 GLY 59 VAL 60 PRO 61 ARG 62 GLN 63 VAL 64 LEU 65 ALA 66 LEU 67 GLU 68 LEU 69 PRO 70 GLU 71 ALA 72 LEU 73 CYS 74 ARG 75 GLU 76 CYS 77 PRO 78 PRO 79 ARG 80 GLN 81 ARG 82 ALA 83 LEU 84 ARG 85 GLN 86 MET 87 GLU 88 PRO 89 PHE 90 PRO 91 LEU 92 ARG 93 VAL 94 PHE 95 VAL 96 ASN 97 PRO 98 SER 99 LEU 100 ARG 101 VAL 102 LEU 103 ASP 104 SER 105 ARG 106 LEU 107 VAL 108 THR 109 PHE 110 PRO 111 GLU 112 GLY 113 CYS 114 GLU 115 SER 116 VAL 117 ALA 118 GLY 119 PHE 120 LEU 121 ALA 122 CYS 123 VAL 124 PRO 125 ARG 126 PHE 127 GLN 128 ALA 129 VAL 130 GLN 131 ILE 132 SER 133 GLY 134 LEU 135 ASP 136 PRO 137 ASN 138 GLY 139 GLU 140 GLN 141 VAL 142 VAL 143 TRP 144 GLN 145 ALA 146 SER 147 GLY 148 TRP 149 ALA 150 ALA 151 ARG 152 ILE 153 ILE 154 GLN 155 HIS 156 GLU 157 MET 158 ASP 159 HIS 160 LEU 161 GLN 162 GLY 163 CYS 164 LEU 165 PHE 166 ILE 167 ASP 168 LYS 169 MET 170 ASP 171 SER 172 ARG 173 THR 174 PHE 175 THR 176 ASN 177 VAL 178 TYR 179 TRP 180 MET 181 LYS 182 VAL 183 ASN 184 ASP 185
Unit 4	HIS 3 MET 4 SER 5 PHE 6 SER 7 HIS 8 VAL 9 CYS 10 GLN 11 VAL 12 GLY 13 ASP 14 PRO 15 VAL 16 LEU 17 ARG 18 GLY 19 VAL 20 ALA 21 ALA 22 PRO 23 VAL 24 GLU 25 ARG 26 ALA 27 GLN 28 LEU 29 GLY 30 GLY 31 PRO 32 GLU 33 LEU 34 GLN 35 ARG 36 LEU 37 THR 38 GLN 39 ARG 40 LEU 41 VAL 42 GLN 43 VAL 44 MET 45 ARG 46 ARG 47 ARG 48 ARG 49 CYS 50 VAL 51 GLY 52 LEU 53 SER 54 ALA 55 PRO 56 GLN 57 LEU 58 GLY 59 VAL 60 PRO 61 ARG 62 GLN 63 VAL 64 LEU 65 ALA 66 LEU 67 GLU 68 LEU 69 PRO 70 GLU 71 ALA 72 LEU 73 CYS 74 ARG 75 GLU 76 CYS 77 PRO 78 PRO 79 ARG 80 GLN 81 ARG 82 ALA 83 LEU 84 ARG 85 GLN 86 MET 87 GLU 88 PRO 89 PHE 90 PRO 91 LEU 92 ARG 93 VAL 94 PHE 95 VAL 96 ASN 97 PRO 98 SER 99 LEU 100 ARG 101 VAL 102 LEU 103 ASP 104 SER 105 ARG 106 LEU 107 VAL 108 THR 109 PHE 110 PRO 111 GLU 112 GLY 113 CYS 114 GLU 115 SER 116 VAL 117 ALA 118 GLY 119 PHE 120 LEU 121 ALA 122 CYS 123 VAL 124 PRO 125 ARG 126 PHE 127 GLN 128 ALA 129 VAL 130 GLN 131 ILE 132 SER 133 GLY 134 LEU 135 ASP 136 PRO 137 ASN 138 GLY 139 GLU 140 GLN 141 VAL 142 VAL 143 TRP 144 GLN 145 ALA 146 SER 147 GLY 148 TRP 149 ALA 150 ALA 151 ARG 152 ILE 153 ILE 154 GLN 155 HIS 156 GLU 157 MET 158 ASP 159 HIS 160 LEU 161 GLN 162 GLY 163 CYS 164 LEU 165 PHE 166 ILE 167 ASP 168 LYS 169 MET 170 ASP 171 SER 172 ARG 173 THR 174 PHE 175 THR 176 ASN 177 VAL 178 TYR 179 TRP 180 MET 181 LYS 182 VAL 183 ASN 184 ASP 185

Ligands

Unit 5	BB2 1001 CO 1002
Unit 6	BB2 1002 CO 1003
Unit 7	CO 1 BB2 1003
Unit 8	CO 2 BB2 1004