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| Title | CRYSTAL STRUCTURE OF (+)-DELTA-CADINENE SYNTHASE FROM GOSSYP ARBOREUM AND EVOLUTIONARY DIVERGENCE OF METAL BINDING MOTIF CATALYSIS | |
| Keywords | CYCLASE, LYASE, MAGNESIUM, METAL-BINDING | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 3G4D | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | (+)-DELTA-CADINENE SYNTHASE ISOZYME XC1 | A | 516 | 4217 | 0 |
| 2 | Protein | (+)-DELTA-CADINENE SYNTHASE ISOZYME XC1 | B | 512 | 4178 | 0 |
| 3 | Ligand | (+)-DELTA-CADINENE SYNTHASE ISOZYME XC1 | A | 3 | 0 | 12 |
| 4 | Ligand | (+)-DELTA-CADINENE SYNTHASE ISOZYME XC1 | B | 4 | 0 | 24 |
| 5 | Water | 382 | 0 | 382 | ||
| total | 1417 | 8395 | 418 |
| Unit 1 | ALA25 ASP26 PHE27 GLN28 PRO29 SER30 ILE31 TRP32 GLY33 ASP34 LEU35 PHE36 LEU37 ASN38 CYS39 PRO40 ASP41 ASP45 ALA46 GLU47 THR48 GLU49 LYS50 ARG51 HIS52 GLN53 GLN54 LEU55 LYS56 GLU57 GLU58 VAL59 ARG60 LYS61 MET62 ILE63 VAL64 ALA65 PRO66 MET67 ALA68 ASN69 SER70 THR71 GLN72 LYS73 LEU74 ALA75 PHE76 ILE77 ASP78 SER79 VAL80 GLN81 ARG82 LEU83 GLY84 VAL85 SER86 TYR87 HIS88 PHE89 THR90 LYS91 GLU92 ILE93 GLU94 ASP95 GLU96 LEU97 GLU98 ASN99 ILE100 TYR101 HIS102 ASN103 ASN104 ASN105 ASP106 ALA107 GLU108 ASN109 ASP110 LEU111 TYR112 THR113 THR114 SER115 ILE116 ARG117 PHE118 ARG119 LEU120 LEU121 ARG122 GLU123 HIS124 GLY125 TYR126 ASN127 VAL128 SER129 CYS130 ASP131 VAL132 PHE133 ASN134 LYS135 PHE136 LYS137 ASP138 GLU139 GLN140 GLY141 ASN142 PHE143 LYS144 SER145 SER146 VAL147 THR148 SER149 ASP150 VAL151 ARG152 GLY153 LEU154 LEU155 GLU156 LEU157 TYR158 GLN159 ALA160 SER161 TYR162 LEU163 ARG164 VAL165 HIS166 GLY167 GLU168 ASP169 ILE170 LEU171 ASP172 GLU173 ALA174 ILE175 SER176 PHE177 THR178 THR179 HIS180 HIS181 LEU182 SER183 LEU184 ALA185 VAL186 ALA187 SER188 LEU189 ASP190 HIS191 PRO192 LEU193 SER194 GLU195 GLU196 VAL197 SER198 HIS199 ALA200 LEU201 LYS202 GLN203 SER204 ILE205 ARG206 ARG207 GLY208 LEU209 PRO210 ARG211 VAL212 GLU213 ALA214 ARG215 HIS216 TYR217 LEU218 SER219 VAL220 TYR221 GLN222 ASP223 ILE224 GLU225 SER226 HIS227 ASN228 LYS229 ALA230 LEU231 LEU232 GLU233 PHE234 ALA235 LYS236 ILE237 ASP238 PHE239 ASN240 MET241 LEU242 GLN243 PHE244 LEU245 HIS246 ARG247 LYS248 GLU249 LEU250 SER251 GLU252 ILE253 CYS254 ARG255 TRP256 TRP257 LYS258 ASP259 LEU260 ASP261 PHE262 GLN263 ARG264 LYS265 LEU266 PRO267 TYR268 ALA269 ARG270 ASP271 ARG272 VAL273 VAL274 GLU275 GLY276 TYR277 PHE278 TRP279 ILE280 SER281 GLY282 VAL283 TYR284 PHE285 GLU286 PRO287 GLN288 TYR289 SER290 LEU291 GLY292 ARG293 LYS294 MET295 LEU296 THR297 LYS298 VAL299 ILE300 ALA301 MET302 ALA303 SER304 ILE305 VAL306 ASP307 ASP308 THR309 TYR310 ASP311 SER312 TYR313 ALA314 THR315 TYR316 GLU317 GLU318 LEU319 ILE320 PRO321 TYR322 THR323 ASN324 ALA325 ILE326 GLU327 ARG328 TRP329 ASP330 ILE331 LYS332 CYS333 ILE334 ASP335 GLU336 ILE337 PRO338 GLU339 TYR340 MET341 LYS342 PRO343 SER344 TYR345 LYS346 ALA347 LEU348 LEU349 ASP350 VAL351 TYR352 GLU353 GLU354 MET355 VAL356 GLN357 LEU358 VAL359 ALA360 GLU361 HIS362 GLY363 ARG364 GLN365 TYR366 ARG367 VAL368 GLU369 TYR370 ALA371 LYS372 ASN373 ALA374 MET375 ILE376 ARG377 LEU378 ALA379 GLN380 SER381 TYR382 LEU383 VAL384 GLU385 ALA386 LYS387 TRP388 THR389 LEU390 GLN391 ASN392 TYR393 LYS394 PRO395 SER396 PHE397 GLU398 GLU399 PHE400 LYS401 ALA402 ASN403 ALA404 LEU405 PRO406 THR407 CYS408 GLY409 TYR410 ALA411 MET412 LEU413 ALA414 ILE415 THR416 SER417 PHE418 VAL419 GLY420 MET421 GLY422 ASP423 ILE424 VAL425 THR426 PRO427 GLU428 THR429 PHE430 LYS431 TRP432 ALA433 ALA434 SER435 ASP436 PRO437 LYS438 ILE439 ILE440 GLN441 ALA442 SER443 THR444 ILE445 ILE446 CYS447 ARG448 PHE449 MET450 ASP451 ASP452 VAL453 ALA454 GLU455 HIS456 LYS457 PHE458 ASP465 CYS466 SER467 ALA468 ILE469 GLU470 CYS471 TYR472 MET473 GLU474 GLU475 TYR476 GLY477 VAL478 THR479 ALA480 GLN481 GLU482 ALA483 TYR484 ASP485 VAL486 PHE487 ASN488 LYS489 HIS490 VAL491 GLU492 SER493 ALA494 TRP495 LYS496 ASP497 LEU498 ASN499 GLN500 GLU501 PHE502 LEU503 LYS504 PRO505 THR506 GLU507 MET508 PRO509 THR510 GLU511 VAL512 LEU513 ASN514 ARG515 SER516 LEU517 ASN518 LEU519 ALA520 ARG521 VAL522 MET523 ASP524 VAL525 LEU526 TYR527 ARG528 GLU529 TYR535 VAL536 GLY537 LYS538 ALA539 ALA540 LYS541 GLY542 GLY543 ILE544 THR545 SER546 LEU547 LEU548 ILE549 GLU550 PRO551 ILE552 ALA553 LEU554 |
| Unit 2 | GLN28 PRO29 SER30 ILE31 TRP32 GLY33 ASP34 LEU35 PHE36 LEU37 ASN38 CYS39 PRO40 ASP41 LYS42 ASN43 ILE44 ALA46 GLU47 THR48 GLU49 LYS50 ARG51 HIS52 GLN53 GLN54 LEU55 LYS56 GLU57 GLU58 VAL59 ARG60 LYS61 MET62 ILE63 VAL64 ALA65 PRO66 MET67 ALA68 ASN69 SER70 THR71 GLN72 LYS73 LEU74 ALA75 PHE76 ILE77 ASP78 SER79 VAL80 GLN81 ARG82 LEU83 GLY84 VAL85 SER86 TYR87 HIS88 PHE89 THR90 LYS91 GLU92 ILE93 GLU94 ASP95 GLU96 LEU97 GLU98 ASN99 ILE100 TYR101 HIS102 ASN103 ASN109 ASP110 LEU111 TYR112 THR113 THR114 SER115 ILE116 ARG117 PHE118 ARG119 LEU120 LEU121 ARG122 GLU123 HIS124 GLY125 TYR126 ASN127 VAL128 SER129 CYS130 ASP131 VAL132 PHE133 ASN134 LYS135 PHE136 LYS137 ASP138 GLU139 GLN140 GLY141 ASN142 PHE143 LYS144 SER145 SER146 VAL147 THR148 SER149 ASP150 VAL151 ARG152 GLY153 LEU154 LEU155 GLU156 LEU157 TYR158 GLN159 ALA160 SER161 TYR162 LEU163 ARG164 VAL165 HIS166 GLY167 GLU168 ASP169 ILE170 LEU171 ASP172 GLU173 ALA174 ILE175 SER176 PHE177 THR178 THR179 HIS180 HIS181 LEU182 SER183 LEU184 ALA185 VAL186 ALA187 SER188 LEU189 ASP190 HIS191 PRO192 LEU193 SER194 GLU195 GLU196 VAL197 SER198 HIS199 ALA200 LEU201 LYS202 GLN203 SER204 ILE205 ARG206 ARG207 GLY208 LEU209 PRO210 ARG211 VAL212 GLU213 ALA214 ARG215 HIS216 TYR217 LEU218 SER219 VAL220 TYR221 GLN222 ASP223 ILE224 GLU225 SER226 HIS227 ASN228 LYS229 ALA230 LEU231 LEU232 GLU233 PHE234 ALA235 LYS236 ILE237 ASP238 PHE239 ASN240 MET241 LEU242 GLN243 PHE244 LEU245 HIS246 ARG247 LYS248 GLU249 LEU250 SER251 GLU252 ILE253 CYS254 ARG255 TRP256 TRP257 LYS258 ASP259 LEU260 ASP261 PHE262 GLN263 ARG264 LYS265 LEU266 PRO267 TYR268 ALA269 ARG270 ASP271 ARG272 VAL273 VAL274 GLU275 GLY276 TYR277 PHE278 TRP279 ILE280 SER281 GLY282 VAL283 TYR284 PHE285 GLU286 PRO287 GLN288 TYR289 SER290 LEU291 GLY292 ARG293 LYS294 MET295 LEU296 THR297 LYS298 VAL299 ILE300 ALA301 MET302 ALA303 SER304 ILE305 VAL306 ASP307 ASP308 THR309 TYR310 ASP311 SER312 TYR313 ALA314 THR315 TYR316 GLU317 GLU318 LEU319 ILE320 PRO321 TYR322 THR323 ASN324 ALA325 ILE326 GLU327 ARG328 TRP329 ASP330 ILE331 LYS332 CYS333 ILE334 ASP335 GLU336 ILE337 PRO338 GLU339 TYR340 MET341 LYS342 PRO343 SER344 TYR345 LYS346 ALA347 LEU348 LEU349 ASP350 VAL351 TYR352 GLU353 GLU354 MET355 VAL356 GLN357 LEU358 VAL359 ALA360 GLU361 HIS362 GLY363 ARG364 GLN365 TYR366 ARG367 VAL368 GLU369 TYR370 ALA371 LYS372 ASN373 ALA374 MET375 ILE376 ARG377 LEU378 ALA379 GLN380 SER381 TYR382 LEU383 VAL384 GLU385 ALA386 LYS387 TRP388 THR389 LEU390 GLN391 ASN392 TYR393 LYS394 PRO395 SER396 PHE397 GLU398 GLU399 PHE400 LYS401 ALA402 ASN403 ALA404 LEU405 PRO406 THR407 CYS408 GLY409 TYR410 ALA411 MET412 LEU413 ALA414 ILE415 THR416 SER417 PHE418 VAL419 GLY420 MET421 GLY422 ASP423 ILE424 VAL425 THR426 PRO427 GLU428 THR429 PHE430 LYS431 TRP432 ALA433 ALA434 SER435 ASP436 PRO437 LYS438 ILE439 ILE440 GLN441 ALA442 SER443 THR444 ILE445 ILE446 CYS447 ARG448 PHE449 MET450 ASP451 ASP452 VAL453 ALA454 GLU455 HIS456 LYS457 PHE458 LYS459 ASP465 CYS466 SER467 ALA468 ILE469 GLU470 CYS471 TYR472 MET473 GLU474 GLU475 TYR476 GLY477 VAL478 THR479 ALA480 GLN481 GLU482 ALA483 TYR484 ASP485 VAL486 PHE487 ASN488 LYS489 HIS490 VAL491 GLU492 SER493 ALA494 TRP495 LYS496 ASP497 LEU498 ASN499 GLN500 GLU501 PHE502 LEU503 LYS504 PRO505 THR506 GLU507 MET508 PRO509 THR510 GLU511 VAL512 LEU513 ASN514 ARG515 SER516 LEU517 ASN518 LEU519 ALA520 ARG521 VAL522 MET523 ASP524 VAL525 LEU526 TYR527 ARG528 GLU529 GLY530 ASP531 GLY532 GLY537 LYS538 ALA539 ALA540 LYS541 GLY542 GLY543 ILE544 THR545 SER546 LEU547 LEU548 ILE549 GLU550 PRO551 ILE552 ALA553 LEU554 |
| Unit 3 | BME1273 BME1274 BME1275 |
| Unit 4 | GOL2431 GOL2432 GOL2433 GOL2434 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |