3FMG - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF ROTAVIRUS OUTER CAPSID PROTEIN VP7 TRIMER IN CO A NEUTRALIZING FAB
• Keywords: ANTIBODY-ANTIGEN COMPLEX, CALCIUM DEPENDENT TRIMER, ANTIPARA BETA-SANDWICH, JELLY ROLL, ALPHA-BETA-ALPHA SANDWICH, ROSSM CAPSID PROTEIN, ENDOPLASMIC RETICULUM, GLYCOPROTEIN, MEMBRA TRANSMEMBRANE, VIRION, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3FMG	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	FAB OF NEUTRALIZING ANTIBODY 4F8, LIGHT CHAIN	L	211	1636	0
2	Protein	FAB OF NEUTRALIZING ANTIBODY 4F8, HEAVY CHAIN	H	221	1668	0
3	Protein	GLYCOPROTEIN VP7	A	235	1860	0
4	Ligand	GLYCOPROTEIN VP7	A	2	0	2
total				669	5164	2

Proteins

Unit 1	ASP 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 ALA 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 GLU 17 THR 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 PRO 25 SER 26 GLU 27 ASN 28 ILE 29 TYR 30 SER 31 TYR 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 GLN 40 GLY 41 LYS 42 SER 43 PRO 44 GLN 45 LEU 46 LEU 47 VAL 48 TYR 49 LYS 50 ALA 51 LYS 52 THR 53 LEU 54 PRO 55 GLU 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 HIS 70 PHE 71 SER 72 LEU 73 LYS 74 ILE 75 SER 76 SER 77 VAL 78 GLN 79 PRO 80 GLU 81 ASP 82 PHE 83 GLY 84 THR 85 TYR 86 TYR 87 CYS 88 GLN 89 HIS 90 HIS 91 ASN 92 GLY 93 PRO 94 PRO 95 LEU 96 THR 97 PHE 98 GLY 99 ALA 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 LEU 106 LYS 107 ARG 108 ALA 109 ASP 110 ALA 111 ALA 112 PRO 113 THR 114 VAL 115 SER 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 SER 122 LYS 123 GLN 124 LEU 125 THR 126 SER 127 GLY 128 GLY 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 PHE 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 LYS 142 ASP 143 ILE 144 ASN 145 VAL 146 LYS 147 TRP 148 LYS 149 ILE 150 ASP 151 GLY 152 SER 153 GLU 154 ARG 155 GLN 156 ASN 157 GLY 158 VAL 159 LEU 160 ASN 161 SER 162 TRP 163 THR 164 ASP 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 MET 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 THR 182 LYS 183 ASP 184 GLU 185 TYR 186 GLU 187 ARG 188 HIS 189 ASN 190 SER 191 TYR 192 THR 193 CYS 194 GLU 195 ALA 196 THR 197 HIS 198 LYS 199 THR 200 SER 201 THR 202 SER 203 PRO 204 ILE 205 VAL 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211
Unit 2	GLN 1 VAL 2 GLN 3 LEU 4 GLN 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 LEU 11 MET 12 LYS 13 PRO 14 GLY 15 ALA 16 LEU 17 VAL 18 LYS 19 ILE 20 SER 21 CYS 22 LYS 23 ALA 24 THR 25 GLY 26 TYR 27 THR 28 PHE 29 SER 30 SER 31 TYR 32 TRP 33 ILE 34 GLU 35 TRP 36 VAL 37 LYS 38 GLN 39 ARG 40 PRO 41 GLY 42 HIS 43 GLY 44 LEU 45 GLU 46 TRP 47 ILE 48 GLY 49 GLU 50 ILE 51 LEU 52 PRO 53 GLY 55 SER 56 GLY 57 SER 58 ILE 59 ASN 60 TYR 61 ASN 62 GLU 63 LYS 64 PHE 65 LYS 66 GLY 67 LYS 68 ALA 69 THR 70 PHE 71 THR 72 ALA 73 ASP 74 THR 75 SER 76 SER 77 ASN 78 THR 79 ALA 80 TYR 81 MET 82 GLN 83 LEU 84 ASN 85 SER 86 LEU 87 THR 89 SER 90 GLU 91 ASP 92 SER 93 ALA 94 VAL 95 TYR 96 TYR 97 CYS 98 ALA 99 ARG 100 ASN 101 HIS 102 GLY 103 SER 104 PRO 105 ASP 106 PHE 107 HIS 108 VAL 109 MET 110 ASP 111 TYR 112 TRP 113 GLY 114 GLN 115 GLY 116 THR 117 SER 118 ILE 119 THR 120 VAL 121 SER 122 SER 123 ALA 124 LYS 125 THR 126 THR 127 ALA 128 PRO 129 PRO 130 VAL 131 TYR 132 PRO 133 LEU 134 ALA 135 PRO 136 GLY 137 SER 138 ALA 139 ALA 140 GLN 143 THR 144 ASN 145 SER 146 MET 147 VAL 148 THR 149 LEU 150 GLY 151 CYS 152 LEU 153 VAL 154 LYS 155 GLY 156 TYR 157 PHE 158 PRO 159 GLU 160 PRO 161 VAL 162 THR 163 VAL 164 THR 166 TRP 167 ASN 172 SER 173 GLY 174 SER 175 LEU 176 SER 177 SER 178 GLY 179 VAL 181 HIS 182 THR 183 PHE 184 PRO 185 ALA 186 VAL 187 LEU 188 GLN 189 SER 190 ASP 193 LEU 194 TYR 195 THR 196 LEU 197 SER 198 SER 199 SER 200 VAL 201 THR 202 VAL 203 PRO 204 SER 205 SER 206 PRO 209 ARG 210 PRO 212 SER 213 GLU 214 THR 215 VAL 216 THR 217 CYS 218 ASN 219 VAL 220 ALA 221 HIS 222 PRO 223 ALA 224 SER 225 SER 226 THR 227 LYS 228 VAL 229 ASP 230 LYS 231 LYS 232 ILE 233 VAL 236 PRO 237 ARG 238
Unit 3	THR 78 SER 79 THR 80 LEU 81 CYS 82 LEU 83 TYR 84 TYR 85 PRO 86 THR 87 GLU 88 ALA 89 ALA 90 THR 91 GLU 92 ILE 93 ASN 94 ASP 95 ASN 96 SER 97 TRP 98 LYS 99 ASP 100 THR 101 LEU 102 SER 103 GLN 104 LEU 105 PHE 106 LEU 107 THR 108 LYS 109 GLY 110 TRP 111 PRO 112 THR 113 GLY 114 SER 115 VAL 116 TYR 117 PHE 118 LYS 119 GLU 120 TYR 121 THR 122 ASP 123 ILE 124 ALA 125 SER 126 PHE 127 SER 128 VAL 129 ASP 130 PRO 131 GLN 132 LEU 133 TYR 134 CYS 135 ASP 136 TYR 137 ASN 138 VAL 139 VAL 140 LEU 141 MET 142 LYS 143 TYR 144 ASP 145 ALA 146 THR 147 LEU 148 GLN 149 LEU 150 ASP 151 MET 152 SER 153 GLU 154 LEU 155 ALA 156 ASP 157 LEU 158 ILE 159 LEU 160 ASN 161 GLU 162 TRP 163 LEU 164 CYS 165 ASN 166 PRO 167 MET 168 ASP 169 ILE 170 THR 171 LEU 172 TYR 173 TYR 174 TYR 175 GLN 176 GLN 177 THR 178 ASP 179 GLU 180 ALA 181 ASN 182 LYS 183 TRP 184 ILE 185 SER 186 MET 187 GLY 188 SER 189 SER 190 CYS 191 THR 192 ILE 193 LYS 194 VAL 195 CYS 196 PRO 197 LEU 198 ASN 199 THR 200 GLN 201 THR 202 LEU 203 GLY 204 ILE 205 GLY 206 CYS 207 LEU 208 THR 209 THR 210 ASP 211 THR 212 ALA 213 THR 214 PHE 215 GLU 216 GLU 217 VAL 218 ALA 219 THR 220 ALA 221 GLU 222 LYS 223 LEU 224 VAL 225 ILE 226 THR 227 ASP 228 VAL 229 VAL 230 ASP 231 GLY 232 VAL 233 ASN 234 HIS 235 LYS 236 LEU 237 ASP 238 VAL 239 THR 240 THR 241 ALA 242 THR 243 CYS 244 THR 245 ILE 246 ARG 247 ASN 248 CYS 249 LYS 250 LYS 251 LEU 252 GLY 253 PRO 254 ARG 255 GLU 256 ASN 257 VAL 258 ALA 259 VAL 260 ILE 261 GLN 262 VAL 263 GLY 264 GLY 265 SER 266 ASP 267 VAL 268 LEU 269 ASP 270 ILE 271 THR 272 ALA 273 ASP 274 PRO 275 THR 276 THR 277 ALA 278 PRO 279 GLN 280 THR 281 GLU 282 ARG 283 MET 284 MET 285 ARG 286 ILE 287 ASN 288 TRP 289 LYS 290 LYS 291 TRP 292 TRP 293 GLN 294 VAL 295 PHE 296 TYR 297 THR 298 VAL 299 VAL 300 ASP 301 TYR 302 VAL 303 ASN 304 GLN 305 ILE 306 ILE 307 GLN 308 ALA 309 MET 310 SER 311 LYS 312

Ligands

Unit 4

CA 327 CA 328