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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE GYF DOMAIN OF SMY2 IN COMPLEX WITH RICH PEPTIDE FROM BBP/SCSF1
Keywords GYF DOMAIN, POLY-PROLINE BINDING, PROLINE-RICH PEPTIDE, DOMA PRS, RAGNYA, PROTEIN BINDING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3FMA     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROTEIN SMY2  A 81 628 24
2  Protein   PROTEIN SMY2  B 84 651 24
3  Protein   PROTEIN SMY2  C 86 665 24
4  Protein   PROTEIN SMY2  D 85 658 24
5  Protein   PROTEIN SMY2  E 85 658 24
6  Protein   BRANCHPOINT-BRIDGING PROTEIN  L 7 44 0
7  Protein   BRANCHPOINT-BRIDGING PROTEIN  M 7 46 0
8  Protein   BRANCHPOINT-BRIDGING PROTEIN  N 6 38 0
9  Protein   BRANCHPOINT-BRIDGING PROTEIN  O 7 44 0
10  Protein   BRANCHPOINT-BRIDGING PROTEIN  P 7 44 0
11 Water     1 0 3
total       456 3476 123

Proteins
Unit 1 SER13 VAL14 GLU15 SER16 SER17 TRP18 ARG19 TYR20 ILE21 ASP22 THR23 GLN24 GLY25 GLN26 ILE27 HIS28 GLY29 PRO30 PHE31 THR32 THR33 GLN34 MSE35 MSE36 SER37 GLN38 TRP39 TYR40 ILE41 GLY42 GLY43 TYR44 PHE45 ALA46 SER47 THR48 LEU49 GLN50 ILE51 SER52 ARG53 LEU54 GLY55 SER56 THR57 PRO58 GLU59 THR60 LEU61 GLY62 ILE63 ASN64 ASP65 ILE66 PHE67 ILE68 THR69 LEU70 GLY71 GLU72 LEU73 MSE74 THR75 LYS76 LEU77 GLU78 LYS79 TYR80 ASP81 THR82 ASP83 PRO84 PHE85 THR86 THR87 PHE88 ASP89 LYS90 LEU91 HIS92 VAL93
Unit 2 SER13 VAL14 GLU15 SER16 SER17 TRP18 ARG19 TYR20 ILE21 ASP22 THR23 GLN24 GLY25 GLN26 ILE27 HIS28 GLY29 PRO30 PHE31 THR32 THR33 GLN34 MSE35 MSE36 SER37 GLN38 TRP39 TYR40 ILE41 GLY42 GLY43 TYR44 PHE45 ALA46 SER47 THR48 LEU49 GLN50 ILE51 SER52 ARG53 LEU54 GLY55 SER56 THR57 PRO58 GLU59 THR60 LEU61 GLY62 ILE63 ASN64 ASP65 ILE66 PHE67 ILE68 THR69 LEU70 GLY71 GLU72 LEU73 MSE74 THR75 LYS76 LEU77 GLU78 LYS79 TYR80 ASP81 THR82 ASP83 PRO84 PHE85 THR86 THR87 PHE88 ASP89 LYS90 LEU91 HIS92 VAL93 GLN94 THR95 THR96
Unit 3 PRO11 VAL12 SER13 VAL14 GLU15 SER16 SER17 TRP18 ARG19 TYR20 ILE21 ASP22 THR23 GLN24 GLY25 GLN26 ILE27 HIS28 GLY29 PRO30 PHE31 THR32 THR33 GLN34 MSE35 MSE36 SER37 GLN38 TRP39 TYR40 ILE41 GLY42 GLY43 TYR44 PHE45 ALA46 SER47 THR48 LEU49 GLN50 ILE51 SER52 ARG53 LEU54 GLY55 SER56 THR57 PRO58 GLU59 THR60 LEU61 GLY62 ILE63 ASN64 ASP65 ILE66 PHE67 ILE68 THR69 LEU70 GLY71 GLU72 LEU73 MSE74 THR75 LYS76 LEU77 GLU78 LYS79 TYR80 ASP81 THR82 ASP83 PRO84 PHE85 THR86 THR87 PHE88 ASP89 LYS90 LEU91 HIS92 VAL93 GLN94 THR95 THR96
Unit 4 VAL12 SER13 VAL14 GLU15 SER16 SER17 TRP18 ARG19 TYR20 ILE21 ASP22 THR23 GLN24 GLY25 GLN26 ILE27 HIS28 GLY29 PRO30 PHE31 THR32 THR33 GLN34 MSE35 MSE36 SER37 GLN38 TRP39 TYR40 ILE41 GLY42 GLY43 TYR44 PHE45 ALA46 SER47 THR48 LEU49 GLN50 ILE51 SER52 ARG53 LEU54 GLY55 SER56 THR57 PRO58 GLU59 THR60 LEU61 GLY62 ILE63 ASN64 ASP65 ILE66 PHE67 ILE68 THR69 LEU70 GLY71 GLU72 LEU73 MSE74 THR75 LYS76 LEU77 GLU78 LYS79 TYR80 ASP81 THR82 ASP83 PRO84 PHE85 THR86 THR87 PHE88 ASP89 LYS90 LEU91 HIS92 VAL93 GLN94 THR95 THR96
Unit 5 VAL12 SER13 VAL14 GLU15 SER16 SER17 TRP18 ARG19 TYR20 ILE21 ASP22 THR23 GLN24 GLY25 GLN26 ILE27 HIS28 GLY29 PRO30 PHE31 THR32 THR33 GLN34 MSE35 MSE36 SER37 GLN38 TRP39 TYR40 ILE41 GLY42 GLY43 TYR44 PHE45 ALA46 SER47 THR48 LEU49 GLN50 ILE51 SER52 ARG53 LEU54 GLY55 SER56 THR57 PRO58 GLU59 THR60 LEU61 GLY62 ILE63 ASN64 ASP65 ILE66 PHE67 ILE68 THR69 LEU70 GLY71 GLU72 LEU73 MSE74 THR75 LYS76 LEU77 GLU78 LYS79 TYR80 ASP81 THR82 ASP83 PRO84 PHE85 THR86 THR87 PHE88 ASP89 LYS90 LEU91 HIS92 VAL93 GLN94 THR95 THR96
Unit 6 ALA4 PRO5 PRO6 PRO7 GLY8 LEU9 SER10
Unit 7 ILE3 ALA4 PRO5 PRO6 PRO7 GLY8 LEU9
Unit 8 ALA4 PRO5 PRO6 PRO7 GLY8 LEU9
Unit 9 ALA4 PRO5 PRO6 PRO7 GLY8 LEU9 SER10
Unit 10 ALA4 PRO5 PRO6 PRO7 GLY8 LEU9 SER10

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany