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Sequence, Chains, Asymmetric and Biological Units

Title DESULFOVIBRIO DESULFURICANS (ATCC 29577) SEMIQUINONE FLAVODO
Keywords FLAVODOXIN-LIKE FOLD, FMN BINDING, SEMIQUINONE, ELECTRON TRA FLAVOPROTEIN, FMN, TRANSPORT
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3F90     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FLAVODOXIN  A 147 1093 0
2  Protein   FLAVODOXIN  B 147 1093 0
3  Protein   FLAVODOXIN  D 147 1093 0
4  Protein   FLAVODOXIN  E 147 1093 0
5  Protein   FLAVODOXIN  F 147 1093 0
6  Protein   FLAVODOXIN  H 147 1093 0
7  Protein   FLAVODOXIN  I 147 1093 0
8  Protein   FLAVODOXIN  G 147 1093 0
9  Ligand   FLAVODOXIN  A 1 0 31
10  Ligand   FLAVODOXIN  B 1 0 31
11  Ligand   FLAVODOXIN  D 1 0 31
12  Ligand   FLAVODOXIN  E 1 0 31
13  Ligand   FLAVODOXIN  F 1 0 31
14  Ligand   FLAVODOXIN  H 1 0 31
15  Ligand   FLAVODOXIN  I 1 0 31
16  Ligand   FLAVODOXIN  G 1 0 31
17 Water     229 0 229
total       1413 8744 477

Proteins
Unit 1 SER2 LYS3 VAL4 LEU5 ILE6 VAL7 PHE8 GLY9 SER10 SER11 THR12 GLY13 ASN14 THR15 GLU16 SER17 ILE18 ALA19 GLN20 LYS21 LEU22 GLU23 GLU24 LEU25 ILE26 ALA27 ALA28 GLY29 GLY30 HIS31 GLU32 VAL33 THR34 LEU35 LEU36 ASN37 ALA38 ALA39 ASP40 ALA41 SER42 ALA43 GLU44 ASN45 LEU46 ALA47 ASP48 GLY49 TYR50 ASP51 ALA52 VAL53 LEU54 PHE55 GLY56 CYS57 SER58 ALA59 TRP60 GLY61 MET62 GLU63 ASP64 LEU65 GLU66 MET67 GLN68 ASP69 ASP70 PHE71 LEU72 SER73 LEU74 PHE75 GLU76 GLU77 PHE78 ASP79 ARG80 ILE81 GLY82 LEU83 ALA84 GLY85 ARG86 LYS87 VAL88 ALA89 ALA90 PHE91 ALA92 SER93 GLY94 ASP95 GLN96 GLU97 TYR98 GLU99 HIS100 PHE101 CYS102 GLY103 ALA104 VAL105 PRO106 ALA107 ILE108 GLU109 GLU110 ARG111 ALA112 LYS113 GLU114 LEU115 GLY116 ALA117 THR118 ILE119 ILE120 ALA121 GLU122 GLY123 LEU124 LYS125 MET126 GLU127 GLY128 ASP129 ALA130 SER131 ASN132 ASP133 PRO134 GLU135 ALA136 VAL137 ALA138 SER139 PHE140 ALA141 GLU142 ASP143 VAL144 LEU145 LYS146 GLN147 LEU148
Unit 2 SER2 LYS3 VAL4 LEU5 ILE6 VAL7 PHE8 GLY9 SER10 SER11 THR12 GLY13 ASN14 THR15 GLU16 SER17 ILE18 ALA19 GLN20 LYS21 LEU22 GLU23 GLU24 LEU25 ILE26 ALA27 ALA28 GLY29 GLY30 HIS31 GLU32 VAL33 THR34 LEU35 LEU36 ASN37 ALA38 ALA39 ASP40 ALA41 SER42 ALA43 GLU44 ASN45 LEU46 ALA47 ASP48 GLY49 TYR50 ASP51 ALA52 VAL53 LEU54 PHE55 GLY56 CYS57 SER58 ALA59 TRP60 GLY61 MET62 GLU63 ASP64 LEU65 GLU66 MET67 GLN68 ASP69 ASP70 PHE71 LEU72 SER73 LEU74 PHE75 GLU76 GLU77 PHE78 ASP79 ARG80 ILE81 GLY82 LEU83 ALA84 GLY85 ARG86 LYS87 VAL88 ALA89 ALA90 PHE91 ALA92 SER93 GLY94 ASP95 GLN96 GLU97 TYR98 GLU99 HIS100 PHE101 CYS102 GLY103 ALA104 VAL105 PRO106 ALA107 ILE108 GLU109 GLU110 ARG111 ALA112 LYS113 GLU114 LEU115 GLY116 ALA117 THR118 ILE119 ILE120 ALA121 GLU122 GLY123 LEU124 LYS125 MET126 GLU127 GLY128 ASP129 ALA130 SER131 ASN132 ASP133 PRO134 GLU135 ALA136 VAL137 ALA138 SER139 PHE140 ALA141 GLU142 ASP143 VAL144 LEU145 LYS146 GLN147 LEU148
Unit 3 SER2 LYS3 VAL4 LEU5 ILE6 VAL7 PHE8 GLY9 SER10 SER11 THR12 GLY13 ASN14 THR15 GLU16 SER17 ILE18 ALA19 GLN20 LYS21 LEU22 GLU23 GLU24 LEU25 ILE26 ALA27 ALA28 GLY29 GLY30 HIS31 GLU32 VAL33 THR34 LEU35 LEU36 ASN37 ALA38 ALA39 ASP40 ALA41 SER42 ALA43 GLU44 ASN45 LEU46 ALA47 ASP48 GLY49 TYR50 ASP51 ALA52 VAL53 LEU54 PHE55 GLY56 CYS57 SER58 ALA59 TRP60 GLY61 MET62 GLU63 ASP64 LEU65 GLU66 MET67 GLN68 ASP69 ASP70 PHE71 LEU72 SER73 LEU74 PHE75 GLU76 GLU77 PHE78 ASP79 ARG80 ILE81 GLY82 LEU83 ALA84 GLY85 ARG86 LYS87 VAL88 ALA89 ALA90 PHE91 ALA92 SER93 GLY94 ASP95 GLN96 GLU97 TYR98 GLU99 HIS100 PHE101 CYS102 GLY103 ALA104 VAL105 PRO106 ALA107 ILE108 GLU109 GLU110 ARG111 ALA112 LYS113 GLU114 LEU115 GLY116 ALA117 THR118 ILE119 ILE120 ALA121 GLU122 GLY123 LEU124 LYS125 MET126 GLU127 GLY128 ASP129 ALA130 SER131 ASN132 ASP133 PRO134 GLU135 ALA136 VAL137 ALA138 SER139 PHE140 ALA141 GLU142 ASP143 VAL144 LEU145 LYS146 GLN147 LEU148
Unit 4 SER2 LYS3 VAL4 LEU5 ILE6 VAL7 PHE8 GLY9 SER10 SER11 THR12 GLY13 ASN14 THR15 GLU16 SER17 ILE18 ALA19 GLN20 LYS21 LEU22 GLU23 GLU24 LEU25 ILE26 ALA27 ALA28 GLY29 GLY30 HIS31 GLU32 VAL33 THR34 LEU35 LEU36 ASN37 ALA38 ALA39 ASP40 ALA41 SER42 ALA43 GLU44 ASN45 LEU46 ALA47 ASP48 GLY49 TYR50 ASP51 ALA52 VAL53 LEU54 PHE55 GLY56 CYS57 SER58 ALA59 TRP60 GLY61 MET62 GLU63 ASP64 LEU65 GLU66 MET67 GLN68 ASP69 ASP70 PHE71 LEU72 SER73 LEU74 PHE75 GLU76 GLU77 PHE78 ASP79 ARG80 ILE81 GLY82 LEU83 ALA84 GLY85 ARG86 LYS87 VAL88 ALA89 ALA90 PHE91 ALA92 SER93 GLY94 ASP95 GLN96 GLU97 TYR98 GLU99 HIS100 PHE101 CYS102 GLY103 ALA104 VAL105 PRO106 ALA107 ILE108 GLU109 GLU110 ARG111 ALA112 LYS113 GLU114 LEU115 GLY116 ALA117 THR118 ILE119 ILE120 ALA121 GLU122 GLY123 LEU124 LYS125 MET126 GLU127 GLY128 ASP129 ALA130 SER131 ASN132 ASP133 PRO134 GLU135 ALA136 VAL137 ALA138 SER139 PHE140 ALA141 GLU142 ASP143 VAL144 LEU145 LYS146 GLN147 LEU148
Unit 5 SER2 LYS3 VAL4 LEU5 ILE6 VAL7 PHE8 GLY9 SER10 SER11 THR12 GLY13 ASN14 THR15 GLU16 SER17 ILE18 ALA19 GLN20 LYS21 LEU22 GLU23 GLU24 LEU25 ILE26 ALA27 ALA28 GLY29 GLY30 HIS31 GLU32 VAL33 THR34 LEU35 LEU36 ASN37 ALA38 ALA39 ASP40 ALA41 SER42 ALA43 GLU44 ASN45 LEU46 ALA47 ASP48 GLY49 TYR50 ASP51 ALA52 VAL53 LEU54 PHE55 GLY56 CYS57 SER58 ALA59 TRP60 GLY61 MET62 GLU63 ASP64 LEU65 GLU66 MET67 GLN68 ASP69 ASP70 PHE71 LEU72 SER73 LEU74 PHE75 GLU76 GLU77 PHE78 ASP79 ARG80 ILE81 GLY82 LEU83 ALA84 GLY85 ARG86 LYS87 VAL88 ALA89 ALA90 PHE91 ALA92 SER93 GLY94 ASP95 GLN96 GLU97 TYR98 GLU99 HIS100 PHE101 CYS102 GLY103 ALA104 VAL105 PRO106 ALA107 ILE108 GLU109 GLU110 ARG111 ALA112 LYS113 GLU114 LEU115 GLY116 ALA117 THR118 ILE119 ILE120 ALA121 GLU122 GLY123 LEU124 LYS125 MET126 GLU127 GLY128 ASP129 ALA130 SER131 ASN132 ASP133 PRO134 GLU135 ALA136 VAL137 ALA138 SER139 PHE140 ALA141 GLU142 ASP143 VAL144 LEU145 LYS146 GLN147 LEU148
Unit 6 SER2 LYS3 VAL4 LEU5 ILE6 VAL7 PHE8 GLY9 SER10 SER11 THR12 GLY13 ASN14 THR15 GLU16 SER17 ILE18 ALA19 GLN20 LYS21 LEU22 GLU23 GLU24 LEU25 ILE26 ALA27 ALA28 GLY29 GLY30 HIS31 GLU32 VAL33 THR34 LEU35 LEU36 ASN37 ALA38 ALA39 ASP40 ALA41 SER42 ALA43 GLU44 ASN45 LEU46 ALA47 ASP48 GLY49 TYR50 ASP51 ALA52 VAL53 LEU54 PHE55 GLY56 CYS57 SER58 ALA59 TRP60 GLY61 MET62 GLU63 ASP64 LEU65 GLU66 MET67 GLN68 ASP69 ASP70 PHE71 LEU72 SER73 LEU74 PHE75 GLU76 GLU77 PHE78 ASP79 ARG80 ILE81 GLY82 LEU83 ALA84 GLY85 ARG86 LYS87 VAL88 ALA89 ALA90 PHE91 ALA92 SER93 GLY94 ASP95 GLN96 GLU97 TYR98 GLU99 HIS100 PHE101 CYS102 GLY103 ALA104 VAL105 PRO106 ALA107 ILE108 GLU109 GLU110 ARG111 ALA112 LYS113 GLU114 LEU115 GLY116 ALA117 THR118 ILE119 ILE120 ALA121 GLU122 GLY123 LEU124 LYS125 MET126 GLU127 GLY128 ASP129 ALA130 SER131 ASN132 ASP133 PRO134 GLU135 ALA136 VAL137 ALA138 SER139 PHE140 ALA141 GLU142 ASP143 VAL144 LEU145 LYS146 GLN147 LEU148
Unit 7 SER2 LYS3 VAL4 LEU5 ILE6 VAL7 PHE8 GLY9 SER10 SER11 THR12 GLY13 ASN14 THR15 GLU16 SER17 ILE18 ALA19 GLN20 LYS21 LEU22 GLU23 GLU24 LEU25 ILE26 ALA27 ALA28 GLY29 GLY30 HIS31 GLU32 VAL33 THR34 LEU35 LEU36 ASN37 ALA38 ALA39 ASP40 ALA41 SER42 ALA43 GLU44 ASN45 LEU46 ALA47 ASP48 GLY49 TYR50 ASP51 ALA52 VAL53 LEU54 PHE55 GLY56 CYS57 SER58 ALA59 TRP60 GLY61 MET62 GLU63 ASP64 LEU65 GLU66 MET67 GLN68 ASP69 ASP70 PHE71 LEU72 SER73 LEU74 PHE75 GLU76 GLU77 PHE78 ASP79 ARG80 ILE81 GLY82 LEU83 ALA84 GLY85 ARG86 LYS87 VAL88 ALA89 ALA90 PHE91 ALA92 SER93 GLY94 ASP95 GLN96 GLU97 TYR98 GLU99 HIS100 PHE101 CYS102 GLY103 ALA104 VAL105 PRO106 ALA107 ILE108 GLU109 GLU110 ARG111 ALA112 LYS113 GLU114 LEU115 GLY116 ALA117 THR118 ILE119 ILE120 ALA121 GLU122 GLY123 LEU124 LYS125 MET126 GLU127 GLY128 ASP129 ALA130 SER131 ASN132 ASP133 PRO134 GLU135 ALA136 VAL137 ALA138 SER139 PHE140 ALA141 GLU142 ASP143 VAL144 LEU145 LYS146 GLN147 LEU148
Unit 8 SER2 LYS3 VAL4 LEU5 ILE6 VAL7 PHE8 GLY9 SER10 SER11 THR12 GLY13 ASN14 THR15 GLU16 SER17 ILE18 ALA19 GLN20 LYS21 LEU22 GLU23 GLU24 LEU25 ILE26 ALA27 ALA28 GLY29 GLY30 HIS31 GLU32 VAL33 THR34 LEU35 LEU36 ASN37 ALA38 ALA39 ASP40 ALA41 SER42 ALA43 GLU44 ASN45 LEU46 ALA47 ASP48 GLY49 TYR50 ASP51 ALA52 VAL53 LEU54 PHE55 GLY56 CYS57 SER58 ALA59 TRP60 GLY61 MET62 GLU63 ASP64 LEU65 GLU66 MET67 GLN68 ASP69 ASP70 PHE71 LEU72 SER73 LEU74 PHE75 GLU76 GLU77 PHE78 ASP79 ARG80 ILE81 GLY82 LEU83 ALA84 GLY85 ARG86 LYS87 VAL88 ALA89 ALA90 PHE91 ALA92 SER93 GLY94 ASP95 GLN96 GLU97 TYR98 GLU99 HIS100 PHE101 CYS102 GLY103 ALA104 VAL105 PRO106 ALA107 ILE108 GLU109 GLU110 ARG111 ALA112 LYS113 GLU114 LEU115 GLY116 ALA117 THR118 ILE119 ILE120 ALA121 GLU122 GLY123 LEU124 LYS125 MET126 GLU127 GLY128 ASP129 ALA130 SER131 ASN132 ASP133 PRO134 GLU135 ALA136 VAL137 ALA138 SER139 PHE140 ALA141 GLU142 ASP143 VAL144 LEU145 LYS146 GLN147 LEU148

Ligands
Unit 9 FMN149
Unit 10 FMN150
Unit 11 FMN151
Unit 12 FMN152
Unit 13 FMN153
Unit 14 FMN154
Unit 15 FMN155
Unit 16 FMN156

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany