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Sequence, Chains, Asymmetric and Biological Units

Title DNA POLYMERASE POLC FROM GEOBACILLUS KAUSTOPHILUS COMPLEX WI DGTP AND MN
Keywords DNA POLYMERASE C, DNA POLYMERASE III, TERNARY COMPLEX, PROTE COMPLEX, REPLICATIVE POLYMERASE, GRAM-POSITIVE, TRANSFERASE COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3F2C     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GEOBACILLUS KAUSTOPHILUS DNA POLC  A 993 7796 0
2  Other macromolecule   5'-D(*DCP*DAP*DGP*DTP*DGP*DAP*DGP*DAP*DCP*DGP*DGP AP*DAP*DCP*DC)-3'  P 13 269 0
3  Other macromolecule   5'-D(*DAP*DTP*DAP*DAP*DCP*DGP*DGP*DTP*DTP*DGP*DCP GP*DTP*DCP*DTP*DCP*DAP*DCP*DTP*DG)-3'  T 18 362 0
4  Ligand   GEOBACILLUS KAUSTOPHILUS DNA POLC  A 6 0 40
5 Water     155 0 155
total       1185 8427 195

Proteins
Unit 1 VAL233 ARG234 ARG235 LEU236 GLU237 THR238 ILE239 VAL240 GLU241 GLU242 GLU243 ARG244 ARG245 VAL246 VAL247 VAL248 GLN249 GLY250 TYR251 VAL252 PHE253 ASP254 ALA255 GLU256 VAL257 SER258 GLU259 LEU260 LYS261 SER262 GLY263 ARG264 THR265 LEU266 LEU267 THR268 MET269 LYS270 ILE271 THR272 ASP273 TYR274 THR275 ASN276 SER277 ILE278 LEU279 VAL280 LYS281 MET282 PHE283 SER284 ARG285 ASP286 LYS287 GLU288 ASP289 ALA290 GLU291 LEU292 MET293 SER294 GLY295 VAL296 LYS297 LYS298 GLY299 MET300 TRP301 VAL302 LYS303 VAL304 ARG305 GLY306 SER307 VAL308 GLN309 ASN310 ASP311 THR312 PHE313 VAL314 ARG315 ASP316 LEU317 VAL318 ILE319 ILE320 ALA321 ASN322 ASP323 LEU324 ASN325 GLU326 ILE327 ALA328 ALA329 ASN330 GLU331 ARG332 GLN333 ASP334 THR335 ALA336 PRO337 GLU338 GLY339 GLU340 LYS341 ARG342 VAL343 GLU344 LEU345 HIS346 LEU347 HIS348 THR349 PRO350 MET351 SER352 GLN353 MET354 ASP355 ALA356 VAL357 THR358 SER359 VAL360 THR361 LYS362 LEU363 ILE364 GLU365 GLN366 ALA367 LYS368 LYS369 TRP370 GLY371 HIS372 PRO373 ALA374 ILE375 ALA376 VAL377 THR378 ASP379 HIS380 ALA381 VAL382 VAL383 GLN384 SER385 PHE386 PRO387 GLU388 ALA389 TYR390 SER391 ALA392 ALA393 LYS394 LYS395 HIS396 GLY397 MET398 LYS399 VAL400 ILE401 TYR402 GLY403 LEU404 GLU405 ALA406 ASN407 ILE408 VAL409 ASP410 ASP411 PRO618 PHE619 HIS620 VAL621 THR622 LEU623 LEU624 ALA625 GLN626 ASN627 GLU628 THR629 GLY630 LEU631 LYS632 ASN633 LEU634 PHE635 LYS636 LEU637 VAL638 SER639 LEU640 SER641 HIS642 ILE643 GLN644 TYR645 PHE646 HIS647 ARG648 VAL649 PRO650 ARG651 ILE652 PRO653 ARG654 SER655 VAL656 LEU657 VAL658 LYS659 HIS660 ARG661 ASP662 GLY663 LEU664 LEU665 VAL666 GLY667 SER668 GLY669 CYS670 ASP671 LYS672 GLY673 GLU674 LEU675 PHE676 ASP677 ASN678 VAL687 GLU688 ASP689 ILE690 ALA691 ARG692 PHE693 TYR694 ASP695 PHE696 LEU697 GLU698 VAL699 HIS700 PRO701 PRO702 ASP703 VAL704 TYR705 LYS706 PRO707 LEU708 VAL714 LYS715 ASP716 GLU717 GLU718 MET719 ILE720 LYS721 ASN722 ILE723 ILE724 ARG725 SER726 ILE727 VAL728 ALA729 LEU730 GLY731 GLU732 LYS733 LEU734 ASP735 ILE736 PRO737 VAL738 VAL739 ALA740 THR741 GLY742 ASN743 VAL744 HIS745 TYR746 LEU747 ASN748 PRO749 GLU750 ASP751 LYS752 ILE753 TYR754 ARG755 LYS756 ILE757 LEU758 ILE759 HIS760 SER761 GLN762 GLY763 GLY764 ALA765 ASN766 PRO767 LEU768 ASN769 ARG770 HIS771 GLU772 LEU773 PRO774 ASP775 VAL776 TYR777 PHE778 ARG779 THR780 THR781 ASN782 GLU783 MET784 LEU785 ASP786 CYS787 PHE788 SER789 PHE790 LEU791 GLY792 PRO793 GLU794 LYS795 ALA796 LYS797 GLU798 ILE799 VAL800 VAL801 ASP802 ASN803 THR804 GLN805 LYS806 ILE807 ALA808 SER809 LEU810 ILE811 GLY812 ASP813 VAL814 LYS815 PRO816 ILE817 LYS818 ASP819 GLU820 LEU821 TYR822 THR823 PRO824 ARG825 ILE826 GLU827 GLY828 ALA829 ASP830 GLU831 GLU832 ILE833 ARG834 GLU835 MET836 SER837 TYR838 ARG839 ARG840 ALA841 LYS842 GLU843 ILE844 TYR845 GLY846 ASP847 PRO848 LEU849 PRO850 LYS851 LEU852 VAL853 GLU854 GLU855 ARG856 LEU857 GLU858 LYS859 GLU860 LEU861 LYS862 SER863 ILE864 ILE865 GLY866 HIS867 GLY868 PHE869 ALA870 VAL871 ILE872 TYR873 LEU874 ILE875 SER876 HIS877 LYS878 LEU879 VAL880 LYS881 LYS882 SER883 LEU884 ASP885 ASP886 GLY887 TYR888 LEU889 VAL890 GLY891 SER892 ARG893 GLY894 SER895 VAL896 GLY897 SER898 SER899 PHE900 VAL901 ALA902 THR903 MET904 THR905 GLU906 ILE907 THR908 GLU909 VAL910 ASN911 PRO912 LEU913 PRO914 PRO915 HIS916 TYR917 VAL918 CYS919 PRO920 ASN921 CYS922 LYS923 HIS924 SER925 GLU926 PHE927 PHE928 ASN929 ASP930 GLY931 SER932 VAL933 GLY934 SER935 GLY936 PHE937 ASP938 LEU939 PRO940 ASP941 LYS942 ASN943 CYS944 PRO945 ARG946 CYS947 GLY948 THR949 LYS950 TYR951 LYS952 LYS953 ASP954 GLY955 HIS956 ASP957 ILE958 PRO959 PHE960 GLU961 THR962 PHE963 LEU964 GLY965 PHE966 LYS967 GLY968 ASP969 LYS970 VAL971 PRO972 ASP973 ILE974 ASP975 LEU976 ASN977 PHE978 SER979 GLY980 GLU981 TYR982 GLN983 PRO984 ARG985 ALA986 HIS987 ASN988 TYR989 THR990 LYS991 VAL992 LEU993 PHE994 GLY995 GLU996 ASP997 ASN998 VAL999 TYR1000 ARG1001 ALA1002 GLY1003 THR1004 ILE1005 GLY1006 THR1007 VAL1008 ALA1009 ASP1010 LYS1011 THR1012 ALA1013 TYR1014 GLY1015 PHE1016 VAL1017 LYS1018 ALA1019 TYR1020 ALA1021 SER1022 ASP1023 HIS1024 ASN1025 LEU1026 GLU1027 LEU1028 ARG1029 GLY1030 ALA1031 GLU1032 ILE1033 ASP1034 ARG1035 LEU1036 ALA1037 ALA1038 GLY1039 CYS1040 THR1041 GLY1042 VAL1043 LYS1044 ARG1045 THR1046 THR1047 GLY1048 GLN1049 HIS1050 PRO1051 GLY1052 GLY1053 ILE1054 ILE1055 VAL1056 VAL1057 PRO1058 ASP1059 TYR1060 MET1061 GLU1062 ILE1063 TYR1064 ASP1065 PHE1066 THR1067 PRO1068 ILE1069 GLN1070 TYR1071 PRO1072 ALA1073 ASP1074 ASP1075 THR1076 SER1077 SER1078 GLU1079 TRP1080 ARG1081 THR1082 THR1083 HIS1084 PHE1085 ASP1086 PHE1087 HIS1088 SER1089 ILE1090 HIS1091 ASP1092 ASN1093 LEU1094 LEU1095 LYS1096 LEU1097 ASP1098 ILE1099 LEU1100 GLY1101 HIS1102 ASP1103 ASP1104 PRO1105 THR1106 VAL1107 ILE1108 ARG1109 MET1110 LEU1111 GLN1112 ASP1113 LEU1114 SER1115 GLY1116 ILE1117 ASP1118 PRO1119 LYS1120 THR1121 ILE1122 PRO1123 THR1124 ASP1125 ASP1126 PRO1127 ASP1128 VAL1129 MET1130 GLY1131 ILE1132 PHE1133 SER1134 SER1135 THR1136 GLU1137 PRO1138 LEU1139 GLY1140 VAL1141 THR1142 PRO1143 GLU1144 GLN1145 ILE1146 MET1147 CYS1148 ASN1149 VAL1150 GLY1151 THR1152 ILE1153 GLY1154 ILE1155 PRO1156 GLU1157 PHE1158 GLY1159 THR1160 ARG1161 PHE1162 VAL1163 ARG1164 GLN1165 MET1166 LEU1167 GLU1168 GLU1169 THR1170 ARG1171 PRO1172 LYS1173 THR1174 PHE1175 SER1176 GLU1177 LEU1178 VAL1179 GLN1180 ILE1181 SER1182 GLY1183 LEU1184 SER1185 HIS1186 GLY1187 THR1188 ASP1189 VAL1190 TRP1191 LEU1192 GLY1193 ASN1194 ALA1195 GLN1196 GLU1197 LEU1198 ILE1199 GLN1200 ASN1201 GLY1202 THR1203 CYS1204 THR1205 LEU1206 SER1207 GLU1208 VAL1209 ILE1210 GLY1211 CYS1212 ARG1213 ASP1214 ASP1215 ILE1216 MET1217 VAL1218 TYR1219 LEU1220 ILE1221 TYR1222 ARG1223 GLY1224 LEU1225 GLU1226 PRO1227 SER1228 LEU1229 ALA1230 PHE1231 LYS1232 ILE1233 MET1234 GLU1235 SER1236 VAL1237 ARG1238 LYS1239 GLY1240 LYS1241 GLY1242 LEU1243 THR1244 PRO1245 GLU1246 PHE1247 GLU1248 ALA1249 GLU1250 MET1251 ARG1252 LYS1253 HIS1254 ASP1255 VAL1256 PRO1257 GLU1258 TRP1259 TYR1260 ILE1261 ASP1262 SER1263 CYS1264 LYS1265 LYS1266 ILE1267 LYS1268 TYR1269 MET1270 PHE1271 PRO1272 LYS1273 ALA1274 HIS1275 ALA1276 ALA1277 ALA1278 TYR1279 VAL1280 LEU1281 MET1282 ALA1283 VAL1284 ARG1285 ILE1286 ALA1287 TYR1288 PHE1289 LYS1290 VAL1291 HIS1292 HIS1293 PRO1294 LEU1295 LEU1296 TYR1297 TYR1298 ALA1299 SER1300 TYR1301 PHE1302 THR1303 VAL1304 ARG1305 ALA1306 GLU1307 ASP1308 PHE1309 ASP1310 LEU1311 ASP1312 ALA1313 MET1314 ILE1315 LYS1316 GLY1317 SER1318 ALA1319 ALA1320 ILE1321 ARG1322 LYS1323 ARG1324 ILE1325 GLU1326 GLU1327 ILE1328 ASN1329 ALA1330 LYS1331 GLY1332 ILE1333 GLN1334 ALA1335 THR1336 ALA1337 LYS1338 GLU1339 LYS1340 SER1341 LEU1342 LEU1343 THR1344 VAL1345 LEU1346 GLU1347 VAL1348 ALA1349 LEU1350 GLU1351 MET1352 CYS1353 GLU1354 ARG1355 GLY1356 PHE1357 SER1358 PHE1359 LYS1360 ASN1361 ILE1362 ASP1363 LEU1364 TYR1365 ARG1366 SER1367 GLN1368 ALA1369 THR1370 GLU1371 PHE1372 VAL1373 ILE1374 ASP1375 GLY1376 ASN1377 SER1378 LEU1379 ILE1380 PRO1381 PRO1382 PHE1383 ASN1384 ALA1385 ILE1386 PRO1387 GLY1388 LEU1389 GLY1390 THR1391 ASN1392 VAL1393 ALA1394 GLN1395 ALA1396 ILE1397 VAL1398 ARG1399 ALA1400 ARG1401 GLU1402 GLU1403 GLY1404 GLU1405 PHE1406 LEU1407 SER1408 LYS1409 GLU1410 ASP1411 LEU1412 GLN1413 GLN1414 ARG1415 GLY1416 LYS1417 LEU1418 SER1419 LYS1420 THR1421 LEU1422 LEU1423 GLU1424 TYR1425 LEU1426 GLU1427 SER1428 ARG1429 GLY1430 CYS1431 LEU1432 ASP1433 SER1434 LEU1435 PRO1436 ASP1437 HIS1438 ASN1439 GLN1440 LEU1441 SER1442 LEU1443 PHE1444

Other macromolecules
Unit 2 DG5 DA6 DG7 DA8 DC9 DG10 DG11 DG12 DC13 DA14 DA15 DC16 DC17
Unit 3 DA1 DT2 DA3 DA4 DC5 DG6 DG7 DT8 DT9 DG10 DC11 DC12 DC13 DG14 DT15 DC16 DT17 DC18

Ligands
Unit 4 MN1 MN2 MN3 ZN4 SO45 DGT1456

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany