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Sequence, Chains, Asymmetric and Biological Units

Title PFA1 FAB FRAGMENT COMPLEXED WITH PYRO-GLU3-A-BETA (3-8)
Keywords FAB, AMYLOID, ALZHEIMER'S, PROTEIN-PEPTIDE COMPLEX, IMMUNE S
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3EYS     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   IF KAPPA LIGHT CHAIN  L 219 1690 11
2  Protein   PFA1 FAB HEAVY CHAIN  H 215 1627 0
3  Protein   PYRO-GLU3-A-BETA (3-8) PEPTIDE  Q 5 40 8
4  Ligand   PFA1 FAB HEAVY CHAIN  H 1 0 6
5 Water     113 0 113
total       553 3357 138

Proteins
Unit 1 ASP1 VAL2 LEU3 MET4 THR5 GLN6 THR7 PRO8 LEU9 SER10 LEU11 PRO12 VAL13 SER14 LEU15 GLY16 ASP17 GLN18 ALA19 SER20 ILE21 SER22 CYS23 ARG24 SER25 SER26 GLN27 SER28 ILE29 VAL30 HIS31 SER32 ASN33 GLY34 ASN35 THR36 TYR37 LEU38 GLU39 TRP40 TYR41 LEU42 GLN43 LYS44 PRO45 GLY46 GLN47 SER48 PRO49 LYS50 LEU51 LEU52 ILE53 TYR54 LYS55 VAL56 SER57 ASN58 ARG59 PHE60 SER61 GLY62 VAL63 PRO64 ASP65 ARG66 PHE67 SER68 GLY69 SER70 GLY71 SER72 GLY73 THR74 ASP75 PHE76 THR77 LEU78 LYS79 ILE80 SER81 ARG82 VAL83 GLU84 ALA85 GLU86 ASP87 LEU88 GLY89 VAL90 TYR91 TYR92 CYS93 PHE94 GLN95 GLY96 SER97 HIS98 VAL99 PRO100 LEU101 THR102 PHE103 GLY104 ALA105 GLY106 THR107 LYS108 LEU109 GLU110 LEU111 LYS112 ARG113 ALA114 ASP115 ALA116 ALA117 PRO118 THR119 VAL120 SER121 ILE122 PHE123 PRO124 PRO125 SER126 SER127 GLU128 GLN129 LEU130 THR131 SER132 GLY133 GLY134 ALA135 SER136 VAL137 VAL138 CYS139 PHE140 LEU141 ASN142 ASN143 PHE144 TYR145 PRO146 LYS147 ASP148 ILE149 ASN150 VAL151 LYS152 TRP153 LYS154 ILE155 ASP156 GLY157 SER158 GLU159 ARG160 GLN161 ASN162 GLY163 VAL164 LEU165 ASN166 SER167 TRP168 THR169 ASP170 GLN171 ASP172 SER173 LYS174 ASP175 SER176 THR177 TYR178 SER179 MET180 SER181 SER182 THR183 LEU184 THR185 LEU186 THR187 LYS188 ASP189 GLU190 TYR191 GLU192 ARG193 HIS194 ASN195 SER196 TYR197 THR198 CYS199 GLU200 ALA201 THR202 HIS203 LYS204 THR205 SER206 THR207 SER208 PRO209 ILE210 VAL211 LYS212 SER213 PHE214 ASN215 ARG216 ASN217 GLU218 YCM219
Unit 2 ALA1 VAL2 THR3 LEU4 LYS5 GLU6 SER7 GLY8 PRO9 GLY10 ILE11 LEU12 LYS13 PRO14 SER15 GLN16 THR17 LEU18 SER19 LEU20 THR21 CYS22 SER23 PHE24 SER25 GLY26 PHE27 SER28 LEU29 SER30 THR31 SER32 GLY33 MET34 GLY35 VAL36 GLY37 TRP38 ILE39 ARG40 GLN41 PRO42 SER43 GLY44 LYS45 GLY46 LEU47 GLU48 TRP49 LEU50 ALA51 HIS52 ILE53 TRP54 TRP55 ASP56 ASP57 ASP58 ARG59 SER60 TYR61 ASN62 PRO63 SER64 LEU65 LYS66 SER67 GLN68 LEU69 THR70 ILE71 SER72 LYS73 ASP74 ALA75 ALA76 ARG77 ASN78 GLN79 VAL80 PHE81 LEU82 ARG83 ILE84 THR85 SER86 VAL87 ASP88 THR89 ALA90 ASP91 THR92 ALA93 THR94 TYR95 TYR96 CYS97 VAL98 ARG99 ARG100 ALA101 HIS102 THR103 THR104 VAL105 LEU106 GLY107 ASP108 TRP109 PHE110 ALA111 TYR112 TRP113 GLY114 GLN115 GLY116 THR117 LEU118 VAL119 THR120 VAL121 SER122 ALA123 ALA124 LYS125 THR126 THR127 ALA128 PRO129 SER130 VAL131 TYR132 PRO133 LEU134 ALA135 PRO136 VAL137 SER144 SER145 VAL146 THR147 LEU148 GLY149 CYS150 LEU151 VAL152 LYS153 GLY154 TYR155 PHE156 PRO157 GLU158 PRO159 VAL160 THR161 LEU162 THR163 TRP164 ASN165 SER166 GLY167 SER168 LEU169 SER170 SER171 GLY172 VAL173 HIS174 THR175 PHE176 PRO177 ALA178 VAL179 LEU180 ASP183 LEU184 TYR185 THR186 LEU187 SER188 SER189 SER190 VAL191 THR192 VAL193 THR194 SER195 SER196 THR197 TRP198 PRO199 SER200 GLN201 SER202 ILE203 THR204 CYS205 ASN206 VAL207 ALA208 HIS209 PRO210 ALA211 SER212 SER213 THR214 LYS215 VAL216 ASP217 LYS218 LYS219 ILE220 GLU221 PRO222 ARG223
Unit 3 PCA3 PHE4 ARG5 HIS6 ASP7

Ligands
Unit 4 GOL224

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany