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Sequence, Chains, Asymmetric and Biological Units

Title DIFFERENT THERMODYNAMIC BINDING MECHANISMS AND PEPTIDE FINE SPECIFICITIES ASSOCIATED WITH A PANEL OF STRUCTURALLY SIMILAR HIGH-AFFINITY T CELL RECEPTORS
Keywords IMMUNE SYSTEM, MHC, PEPTIDE RECOGNITION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3ERY     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN  A 174 1445 0
2  Protein   H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN  B 149 1217 0
3  Protein   2-OXOGLUTARATE DEHYDROGENASE E1 PEPTIDE  P 9 70 0
4  Protein   2-OXOGLUTARATE DEHYDROGENASE E1 PEPTIDE  Q 9 73 0
5 Water     141 0 141
total       482 2805 141

Proteins
Unit 1 GLY1 PRO2 HIS3 SER4 MET5 ARG6 TYR7 TYR8 GLU9 THR10 ALA11 THR12 SER13 ARG14 ARG15 GLY16 LEU17 GLY18 GLU19 PRO20 ARG21 TYR22 THR23 SER24 VAL25 GLY26 TYR27 VAL28 ASP29 ASP30 LYS31 GLU32 PHE33 VAL34 ARG35 PHE36 ASP37 SER38 ASP39 ALA40 GLU41 ASN42 PRO43 ARG44 TYR45 GLU46 PRO47 GLN48 VAL49 PRO50 TRP51 MET52 GLU53 GLN54 GLU55 GLY56 PRO57 GLU58 TYR59 TRP60 GLU61 ARG62 ILE63 THR64 GLN65 VAL66 ALA67 LYS68 GLY69 GLN70 GLU71 GLN72 TRP73 PHE74 ARG75 VAL76 ASN77 LEU78 ARG79 THR80 LEU81 LEU82 GLY83 TYR84 TYR85 ASN86 GLN87 SER88 ALA89 GLY90 GLY91 THR92 HIS93 THR94 LEU95 GLN96 ARG97 MET98 TYR99 GLY100 CYS101 ASP102 VAL103 GLY104 SER105 ASP106 GLY107 ARG108 LEU109 LEU110 ARG111 GLY112 TYR113 GLU114 GLN115 PHE116 ALA117 TYR118 ASP119 GLY120 CYS121 ASP122 TYR123 ILE124 ALA125 LEU126 ASN127 GLU128 ASP129 LEU130 ARG131 THR132 TRP133 THR134 ALA135 ALA136 ASP137 MET138 ALA139 ALA140 GLN141 ILE142 THR143 ARG144 ARG145 LYS146 TRP147 GLU148 GLN149 ALA150 GLY151 ALA152 ALA153 GLU154 TYR155 TYR156 ARG157 ALA158 TYR159 LEU160 GLU161 GLY162 GLU163 CYS164 VAL165 GLU166 TRP167 LEU168 HIS169 ARG170 TYR171 LEU172 LYS173 ASN174
Unit 2 GLY1 PRO2 HIS3 SER4 MET5 ARG6 TYR7 TYR8 GLU9 THR10 ALA11 THR12 SER13 ARG14 ARG15 GLY16 LEU17 GLY18 GLU19 PRO20 ARG21 TYR22 THR23 SER24 VAL25 GLY26 TYR27 VAL28 ASP29 ASP30 LYS31 GLU32 PHE33 VAL34 ARG35 PHE36 ASP37 SER38 ASP39 ALA40 ARG62 ILE63 THR64 GLN65 VAL66 ALA67 LYS68 GLY69 GLN70 GLU71 GLN72 TRP73 PHE74 ARG75 VAL76 ASN77 LEU78 ARG79 THR80 LEU81 LEU82 GLY83 TYR84 TYR85 ASN86 GLN87 SER88 ALA89 GLY90 GLY91 THR92 HIS93 THR94 LEU95 GLN96 ARG97 MET98 TYR99 GLY100 CYS101 ASP102 VAL103 GLY104 SER105 ASP106 GLY107 ARG108 LEU109 LEU110 ARG111 GLY112 TYR113 GLU114 GLN115 PHE116 ALA117 TYR118 ASP119 GLY120 CYS121 ASP122 TYR123 ILE124 ALA125 LEU126 ASN127 GLU128 ASP129 LEU130 ARG131 THR132 TRP133 THR134 ALA135 ALA136 ASP137 MET138 ALA139 ALA140 GLN141 ILE142 THR143 ARG144 ARG145 LYS146 TRP147 GLU148 GLN149 ALA150 GLY151 ALA152 ALA153 GLU154 TYR155 TYR156 ARG157 ALA158 TYR159 LEU160 GLU161 GLY162 GLU163 CYS164 VAL165 GLU166 TRP167 LEU168 HIS169 ARG170
Unit 3 GLN1 LEU2 SER3 PRO4 PHE5 PRO6 PHE7 ASP8 LEU9
Unit 4 GLN1 LEU2 SER3 PRO4 PHE5 PRO6 PHE7 ASP8 LEU9

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany