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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PENICILLIN-BINDING PROTEIN 2 FROM NEISS GONORRHOEAE CONTAINING FOUR MUTATIONS ASSOCIATED WITH PENIC RESISTANCE
Keywords PENICILLIN-BINDING PROTEIN, CLASS B TRANSPEPTIDASE, PENICILL RESISTANCE, CELL DIVISION, CELL INNER MEMBRANE, CELL MEMBRA SHAPE, CELL WALL BIOGENESIS/DEGRADATION, PEPTIDOGLYCAN SYNT BIOSYNTHETIC PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3EQV     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PENICILLIN-BINDING PROTEIN 2  A 443 3379 10
2  Protein   PENICILLIN-BINDING PROTEIN 2  B 426 3234 10
3  Ligand   PENICILLIN-BINDING PROTEIN 2  A 7 0 36
4  Ligand   PENICILLIN-BINDING PROTEIN 2  B 10 0 51
5 Water     79 0 79
total       965 6613 186
Proteins
Unit 1 THR53 TYR54 ASN55 PHE56 LEU57 LYS58 GLU59 GLN60 GLY61 ASP62 ASN63 ARG64 ILE65 VAL66 ARG67 THR68 GLN69 ALA70 LEU71 PRO72 ALA73 THR74 ARG75 GLY76 THR77 VAL78 SER79 ASP80 ARG81 ASN82 GLY83 ALA84 VAL85 LEU86 ALA87 LEU88 SER89 ALA90 PRO91 THR92 GLU93 GLU164 LEU165 LYS166 ARG167 HIS168 TYR169 PRO170 MET171 GLY172 ASN173 LEU174 PHE175 ALA176 HIS177 VAL178 ILE179 GLY180 PHE181 THR182 ASP183 ILE184 ASP185 GLY186 LYS187 GLY188 GLN189 GLU190 GLY191 LEU192 GLU193 LEU194 SER195 LEU196 GLU197 ASP198 SER199 LEU200 TYR201 GLY202 GLU203 ASP204 GLY205 ALA206 GLU207 VAL208 VAL209 LEU210 ARG211 ASP212 ARG213 GLN214 GLY215 ASN216 ILE217 VAL218 ASP219 SER220 LEU221 ASP222 SER223 PRO224 ARG225 ASN226 LYS227 ALA228 PRO229 GLN230 ASN231 GLY232 LYS233 ASP234 ILE235 ILE236 LEU237 SER238 LEU239 ASP240 GLN241 ARG242 ILE243 GLN244 THR245 LEU246 ALA247 TYR248 GLU249 GLU250 LEU251 ASN252 LYS253 ALA254 VAL255 GLU256 TYR257 HIS258 GLN259 ALA260 LYS261 ALA262 GLY263 THR264 VAL265 VAL266 VAL267 LEU268 ASP269 ALA270 ARG271 THR272 GLY273 GLU274 ILE275 LEU276 ALA277 LEU278 ALA279 ASN280 THR281 PRO282 ALA283 TYR284 ASP285 PRO286 ASN287 ARG288 PRO289 GLY290 ARG291 ALA292 ASP293 SER294 GLU295 GLN296 ARG297 ARG298 ASN299 ARG300 ALA301 VAL302 THR303 ASP304 MET305 ILE306 GLU307 PRO308 GLY309 SER310 ALA311 ILE312 LYS313 PRO314 PHE315 VAL316 ILE317 ALA318 LYS319 ALA320 LEU321 ASP322 ALA323 GLY324 LYS325 THR326 ASP327 LEU328 ASN329 GLU330 ARG331 LEU332 ASN333 THR334 GLN335 PRO336 TYR337 LYS338 ILE339 GLY340 PRO341 SER342 PRO343 VAL344 ARG345 ASP346 THR347 HIS348 VAL349 TYR350 PRO351 SER352 LEU353 ASP354 VAL355 ARG356 GLY357 ILE358 MET359 GLN360 LYS361 SER362 SER363 ASN364 VAL365 GLY366 THR367 SER368 LYS369 LEU370 SER371 ALA372 ARG373 PHE374 GLY375 ALA376 GLU377 GLU378 MET379 TYR380 ASP381 PHE382 TYR383 HIS384 GLU385 LEU386 GLY387 ILE388 GLY389 VAL390 ARG391 MET392 HIS393 SER394 GLY395 PHE396 PRO397 GLY398 GLU399 THR400 ALA401 GLY402 LEU403 LEU404 ARG405 ASN406 TRP407 ARG408 ARG409 TRP410 ARG411 PRO412 ILE413 GLU414 GLN415 ALA416 THR417 MET418 SER419 PHE420 GLY421 TYR422 GLY423 LEU424 GLN425 LEU426 SER427 LEU428 LEU429 GLN430 LEU431 ALA432 ARG433 ALA434 TYR435 THR436 ALA437 LEU438 THR439 HIS440 ASP441 GLY442 VAL443 LEU444 LEU445 PRO446 LEU447 SER448 PHE449 GLU450 LYS451 GLN452 ALA453 VAL454 ALA455 PRO456 GLN457 GLY458 LYS459 ARG460 ILE461 PHE462 LYS463 GLU464 SEP465 THR466 ALA467 ARG468 GLU469 VAL470 ARG471 ASN472 LEU473 MET474 VAL475 SER476 VAL477 THR478 GLU479 PRO480 GLY481 GLY482 THR483 GLY484 THR485 ALA486 GLY487 ALA488 VAL489 ASP490 GLY491 PHE492 ASP493 VAL494 GLY495 ALA496 LYS497 THR498 GLY499 THR500 ALA501 ARG502 LYS503 ASN512 LYS513 HIS514 VAL515 GLY516 THR517 PHE518 ILE519 GLY520 PHE521 ALA522 PRO523 ALA524 LYS525 ASN526 PRO527 ARG528 VAL529 ILE530 VAL531 ALA532 VAL533 THR534 ILE535 ASP536 GLU537 PRO538 THR539 ALA540 HIS541 GLY542 TYR543 TYR544 GLY545 GLY546 VAL547 VAL548 ALA549 GLY550 SER551 PRO552 PHE553 LYS554 LYS555 ILE556 MET557 GLY558 GLY559 SER560 LEU561 ASN562 ILE563 LEU564 GLY565 ILE566 SER567 PRO568 THR569 LYS570 PRO571 LEU572 THR573
Unit 2 VAL66 ARG67 THR68 GLN69 ALA70 LEU71 PRO72 ALA73 THR74 ARG75 GLY76 THR77 VAL78 SER79 ASP80 ARG81 ASN82 GLY83 ALA84 VAL85 LEU86 ALA87 LEU88 SER89 ALA90 PRO91 THR92 GLU93 LEU165 LYS166 ARG167 HIS168 TYR169 PRO170 MET171 GLY172 ASN173 LEU174 PHE175 ALA176 HIS177 VAL178 ILE179 GLY180 PHE181 THR182 ASP183 ILE184 ASP185 GLY186 LYS187 GLY188 GLN189 GLU190 GLY191 LEU192 GLU193 LEU194 SER195 LEU196 GLU197 ASP198 SER199 LEU200 TYR201 GLY202 GLU203 ASP204 GLY205 ALA206 GLU207 VAL208 VAL209 LEU210 ARG211 ASP212 ASN216 ILE217 VAL218 ASP219 SER220 LEU221 ASP222 SER223 PRO224 ARG225 ASN226 LYS227 ALA228 PRO229 GLN230 ASN231 GLY232 LYS233 ASP234 ILE235 ILE236 LEU237 SER238 LEU239 ASP240 GLN241 ARG242 ILE243 GLN244 THR245 LEU246 ALA247 TYR248 GLU249 GLU250 LEU251 ASN252 LYS253 ALA254 VAL255 GLU256 TYR257 HIS258 GLN259 ALA260 LYS261 ALA262 GLY263 THR264 VAL265 VAL266 VAL267 LEU268 ASP269 ALA270 ARG271 THR272 GLY273 GLU274 ILE275 LEU276 ALA277 LEU278 ALA279 ASN280 THR281 PRO282 ALA283 TYR284 ASP285 PRO286 ASN287 ARG288 PRO289 GLY290 ARG291 ALA292 ASP293 SER294 GLU295 GLN296 ARG297 ARG298 ASN299 ARG300 ALA301 VAL302 THR303 ASP304 MET305 ILE306 GLU307 PRO308 GLY309 SER310 ALA311 ILE312 LYS313 PRO314 PHE315 VAL316 ILE317 ALA318 LYS319 ALA320 LEU321 ASP322 ALA323 GLY324 LYS325 THR326 ASP327 LEU328 ASN329 GLU330 ARG331 LEU332 ASN333 THR334 GLN335 PRO336 TYR337 LYS338 ILE339 GLY340 PRO341 SER342 PRO343 VAL344 ARG345 ASP346 THR347 HIS348 VAL349 TYR350 PRO351 SER352 LEU353 ASP354 VAL355 ARG356 GLY357 ILE358 MET359 GLN360 LYS361 SER362 SER363 ASN364 VAL365 GLY366 THR367 SER368 LYS369 LEU370 SER371 ALA372 ARG373 PHE374 GLY375 ALA376 GLU377 GLU378 MET379 TYR380 ASP381 PHE382 TYR383 HIS384 GLU385 LEU386 GLY387 ILE388 GLY389 VAL390 ARG391 MET392 HIS393 SER394 GLY395 PHE396 PRO397 GLY398 GLU399 THR400 ALA401 GLY402 LEU403 LEU404 ARG405 ASN406 TRP407 ARG408 ARG409 TRP410 ARG411 PRO412 ILE413 GLU414 GLN415 ALA416 THR417 MET418 SER419 PHE420 GLY421 TYR422 GLY423 LEU424 GLN425 LEU426 SER427 LEU428 LEU429 GLN430 LEU431 ALA432 ARG433 ALA434 TYR435 THR436 ALA437 LEU438 THR439 HIS440 ASP441 GLY442 VAL443 LEU444 LEU445 PRO446 LEU447 SER448 PHE449 GLU450 LYS451 GLN452 ALA453 VAL454 ALA455 PRO456 GLN457 GLY458 LYS459 ARG460 ILE461 PHE462 LYS463 GLU464 SEP465 THR466 ALA467 ARG468 GLU469 VAL470 ARG471 ASN472 LEU473 MET474 VAL475 SER476 VAL477 THR478 GLU479 PRO480 GLY481 GLY482 THR483 GLY484 THR485 ALA486 GLY487 ALA488 VAL489 ASP490 GLY491 PHE492 ASP493 VAL494 GLY495 ALA496 LYS497 THR498 GLY499 THR500 ALA501 ARG502 LYS503 ASN512 LYS513 HIS514 VAL515 GLY516 THR517 PHE518 ILE519 GLY520 PHE521 ALA522 PRO523 ALA524 LYS525 ASN526 PRO527 ARG528 VAL529 ILE530 VAL531 ALA532 VAL533 THR534 ILE535 ASP536 GLU537 PRO538 THR539 ALA540 HIS541 GLY542 TYR543 TYR544 GLY545 GLY546 VAL547 VAL548 ALA549 GLY550 SER551 PRO552 PHE553 LYS554 LYS555 ILE556 MET557 GLY558 GLY559 SER560 LEU561 ASN562 ILE563 LEU564 GLY565 ILE566 SER567 PRO568 THR569 LYS570 PRO571 LEU572 THR573
Ligands
Unit 3 GOL2 SO43 SO44 SO48 SO411 SO413 SO415
Unit 4 SO41 SO42 SO45 SO46 SO47 SO49 SO410 SO412 SO414 GOL582
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany