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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN LGP2 C-TERMINAL DOMAIN IN COMPLEX WITH DSRNA
Keywords INNATE IMMUNITY, RIG-I-LIKE HELICASES, VIRAL RNA DETECTION, LGP2/DSRNA COMPLEX, ATP-BINDING, COILED COIL, CYTOPLASM, HELICASE, HYDROLASE, IMMUNE RESPONSE, NUCLEOTIDE-BINDING, POLYMORPHISM, RNA-BINDING, RNA BINDING PROTEIN/RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3EQT     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ATP-DEPENDENT RNA HELICASE DHX58  A 127 1017 0
2  Protein   ATP-DEPENDENT RNA HELICASE DHX58  B 142 1149 0
3  RNA    C 8 169 0
4  RNA    D 8 169 0
5  Ligand   ATP-DEPENDENT RNA HELICASE DHX58  A 1 0 1
6  Ligand   ATP-DEPENDENT RNA HELICASE DHX58  B 1 0 1
7 Water     215 0 215
total       502 2504 217
Proteins
Unit 1 GLN546 PHE547 PRO548 VAL549 GLU550 HIS551 VAL552 GLN553 LEU554 LEU555 CYS556 ILE557 ASN558 CYS559 MET560 VAL561 ALA562 VAL563 GLY564 HIS565 GLY566 SER567 ASP568 LEU569 ARG570 LYS571 VAL572 GLU573 GLY574 THR575 HIS576 HIS577 VAL578 ASN579 VAL580 ASN581 PRO582 ASN583 PHE584 SER585 ASN586 TYR587 TYR588 ASN589 VAL590 SER591 ARG592 ASP593 PRO594 VAL595 VAL596 ILE597 ASN598 LYS599 VAL600 PHE601 LYS602 ASP603 TRP604 LYS605 PRO606 GLY607 GLY608 VAL609 ILE610 SER611 CYS612 ARG613 ASN614 CYS615 GLY616 GLU617 VAL618 TRP619 GLY620 LEU621 GLN622 MET623 ILE624 TYR625 LYS626 SER627 VAL628 LYS629 LEU630 PRO631 VAL632 LEU633 LYS634 VAL635 ARG636 SER637 MET638 LEU639 LEU640 GLU641 THR642 PRO643 GLN644 GLY645 ARG646 ILE647 GLN648 ALA649 LYS650 LYS651 TRP652 SER653 ARG654 VAL655 PRO656 PHE657 SER658 VAL659 PRO660 ASP661 PHE662 ASP663 PHE664 LEU665 GLN666 HIS667 CYS668 ALA669 GLU670 ASN671 LEU672
Unit 2 ARG544 GLN545 GLN546 PHE547 PRO548 VAL549 GLU550 HIS551 VAL552 GLN553 LEU554 LEU555 CYS556 ILE557 ASN558 CYS559 MET560 VAL561 ALA562 VAL563 GLY564 HIS565 GLY566 SER567 ASP568 LEU569 ARG570 LYS571 VAL572 GLU573 GLY574 THR575 HIS576 HIS577 VAL578 ASN579 VAL580 ASN581 PRO582 ASN583 PHE584 SER585 ASN586 TYR587 TYR588 ASN589 VAL590 SER591 ARG592 ASP593 PRO594 VAL595 VAL596 ILE597 ASN598 LYS599 VAL600 PHE601 LYS602 ASP603 TRP604 LYS605 PRO606 GLY607 GLY608 VAL609 ILE610 SER611 CYS612 ARG613 ASN614 CYS615 GLY616 GLU617 VAL618 TRP619 GLY620 LEU621 GLN622 MET623 ILE624 TYR625 LYS626 SER627 VAL628 LYS629 LEU630 PRO631 VAL632 LEU633 LYS634 VAL635 ARG636 SER637 MET638 LEU639 LEU640 GLU641 THR642 PRO643 GLN644 GLY645 ARG646 ILE647 GLN648 ALA649 LYS650 LYS651 TRP652 SER653 ARG654 VAL655 PRO656 PHE657 SER658 VAL659 PRO660 ASP661 PHE662 ASP663 PHE664 LEU665 GLN666 HIS667 CYS668 ALA669 GLU670 ASN671 LEU672 SER673 ASP674 LEU675 SER676 LEU677 ASP678 LEU679 GLU680 HIS681 HIS682 HIS683 HIS684 HIS685
Nucleic acids
Unit 3 G1 C2 G3 C4 G5 C6 G7 C8
Unit 4 G1 C2 G3 C4 G5 C6 G7 C8
Ligands
Unit 5 ZN1
Unit 6 ZN2
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany