3EPZ - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF THE REPLICATION FOCI-TARGETING SEQUENCE OF HUMA CYTOSINE METHYLTRANSFERASE DNMT1
• Keywords: WINGED HELIX DOMAIN, SH3-LIKE BARREL, CELL CYCLE, METAL BIND BINDING, DNA REPLICATION, TRANSCRIPTIONAL SILENCING, CHROMA PHOSPHORYLATION, TRANSCRIPTION, TRANSCRIPTION REGULATION, TRANSFERASE, EPIGENETICS ZINC, ZINC-FINGER, METHYLTRANSFERA NUCLEUS, PHOSPHOPROTEIN, REPRESSOR, S-ADENOSYL-L-METHIONINE STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3EPZ	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DNA (CYTOSINE-5)-METHYLTRANSFERASE 1	A	227	1701	32
2	Protein	DNA (CYTOSINE-5)-METHYLTRANSFERASE 1	B	223	1673	32
3	Ligand	DNA (CYTOSINE-5)-METHYLTRANSFERASE 1	A	4	0	20
4	Ligand	DNA (CYTOSINE-5)-METHYLTRANSFERASE 1	B	1	0	1
5	Water			91	0	91
total				546	3374	176

Proteins

Unit 1

GLY 350 PRO 351 LYS 352 CYS 353 ILE 354 GLN 355 CYS 356 GLY 357 GLN 358 TYR 359 LEU 360 ASP 361 ASP 362 PRO 363 ASP 364 LEU 365 LYS 366 TYR 367 GLY 368 GLN 369 HIS 370 PRO 371 PRO 372 ASP 373 ALA 374 VAL 375 ASP 376 GLU 377 PRO 378 GLN 379 MSE 380 LEU 381 THR 382 ASN 383 GLU 384 LYS 385 LEU 386 SER 387 ILE 388 PHE 389 ASP 390 ALA 401 LEU 402 PRO 403 GLN 404 HIS 405 LYS 406 LEU 407 THR 408 CYS 409 PHE 410 SER 411 VAL 412 TYR 413 CYS 414 LYS 415 HIS 416 GLY 417 HIS 418 LEU 419 CYS 420 PRO 421 ILE 422 ASP 423 THR 424 GLY 425 LEU 426 ILE 427 GLU 428 LYS 429 ASN 430 ILE 431 GLU 432 LEU 433 PHE 434 PHE 435 SER 436 GLY 437 SER 438 ALA 439 LYS 440 PRO 441 ILE 442 PRO 447 GLY 451 GLY 452 VAL 453 ASN 454 GLY 455 LYS 456 ASN 457 LEU 458 GLY 459 PRO 460 ILE 461 ASN 462 GLU 463 TRP 464 TRP 465 ILE 466 THR 467 GLY 468 GLY 472 GLU 473 LYS 474 ALA 475 LEU 476 ILE 477 GLY 478 PHE 479 SER 480 THR 481 SER 482 PHE 483 ALA 484 GLU 485 TYR 486 ILE 487 LEU 488 MSE 489 ASP 490 PRO 491 SER 492 PRO 493 GLU 494 TYR 495 ALA 496 PRO 497 ILE 498 PHE 499 GLY 500 LEU 501 MSE 502 GLN 503 GLU 504 LYS 505 ILE 506 TYR 507 ILE 508 SER 509 LYS 510 ILE 511 VAL 512 VAL 513 GLU 514 PHE 515 LEU 516 GLN 517 SER 518 ASN 519 SER 520 ASP 521 SER 522 THR 523 TYR 524 GLU 525 ASP 526 LEU 527 ILE 528 ASN 529 LYS 530 ILE 531 GLU 532 THR 533 THR 534 VAL 535 PRO 536 PRO 537 SER 538 GLY 539 LEU 540 ASN 541 LEU 542 ASN 543 ARG 544 PHE 545 THR 546 GLU 547 ASP 548 SER 549 LEU 550 LEU 551 ARG 552 HIS 553 ALA 554 GLN 555 PHE 556 VAL 557 VAL 558 GLU 559 GLN 560 VAL 561 GLU 562 SER 563 TYR 564 ASP 565 GLU 566 ALA 567 GLY 568 ASP 569 GLN 573 PRO 574 ILE 575 PHE 576 LEU 577 THR 578 PRO 579 CYS 580 MSE 581 ARG 582 ASP 583 LEU 584 ILE 585 LYS 586 LEU 587 ALA 588 GLY 589 VAL 590 THR 591 LEU 592 GLY 593 GLN 594 ARG 595 ARG 596 ALA 597 GLN 598 ALA 599

Unit 2

GLY 342 ARG 343 PHE 348 GLN 349 GLY 350 PRO 351 LYS 352 CYS 353 ILE 354 GLN 355 CYS 356 GLY 357 GLN 358 TYR 359 LEU 360 ASP 361 ASP 362 PRO 363 ASP 364 LEU 365 LYS 366 TYR 367 GLY 368 GLN 369 HIS 370 PRO 371 PRO 372 ASP 373 ALA 374 VAL 375 ASP 376 GLU 377 PRO 378 GLN 379 MSE 380 LEU 381 THR 382 ASN 383 GLU 384 LEU 402 PRO 403 GLN 404 HIS 405 LYS 406 LEU 407 THR 408 CYS 409 PHE 410 SER 411 VAL 412 TYR 413 CYS 414 LYS 415 HIS 416 GLY 417 HIS 418 LEU 419 CYS 420 PRO 421 ILE 422 ASP 423 THR 424 GLY 425 LEU 426 ILE 427 GLU 428 LYS 429 ASN 430 ILE 431 GLU 432 LEU 433 PHE 434 PHE 435 SER 436 GLY 437 SER 438 ALA 439 LYS 440 PRO 441 ILE 442 TYR 443 ASP 444 ASP 445 ASP 446 GLU 450 GLY 451 GLY 452 VAL 453 ASN 454 GLY 455 LYS 456 ASN 457 LEU 458 GLY 459 PRO 460 ILE 461 ASN 462 GLU 463 TRP 464 TRP 465 ILE 466 THR 467 LYS 474 ALA 475 LEU 476 ILE 477 GLY 478 PHE 479 SER 480 THR 481 SER 482 PHE 483 ALA 484 GLU 485 TYR 486 ILE 487 LEU 488 MSE 489 ASP 490 PRO 491 SER 492 PRO 493 GLU 494 TYR 495 ALA 496 PRO 497 ILE 498 PHE 499 GLY 500 LEU 501 MSE 502 GLN 503 GLU 504 LYS 505 ILE 506 TYR 507 ILE 508 SER 509 LYS 510 ILE 511 VAL 512 VAL 513 GLU 514 PHE 515 LEU 516 GLN 517 SER 518 ASN 519 SER 520 ASP 521 SER 522 THR 523 TYR 524 GLU 525 ASP 526 LEU 527 ILE 528 ASN 529 LYS 530 ILE 531 GLU 532 THR 533 THR 534 VAL 535 PRO 536 PRO 537 SER 538 GLY 539 LEU 540 ASN 541 LEU 542 ASN 543 ARG 544 PHE 545 THR 546 GLU 547 ASP 548 SER 549 LEU 550 LEU 551 ARG 552 HIS 553 ALA 554 GLN 555 PHE 556 VAL 557 VAL 558 GLU 559 GLN 560 VAL 561 GLU 562 SER 563 TYR 564 ASP 565 GLU 566 ALA 567 GLY 568 ASP 569 GLN 573 PRO 574 ILE 575 PHE 576 LEU 577 THR 578 PRO 579 CYS 580 MSE 581 ARG 582 ASP 583 LEU 584 ILE 585 LYS 586 LEU 587 ALA 588 GLY 589 VAL 590 THR 591 LEU 592 GLY 593 GLN 594 ARG 595 ARG 596 ALA 597

Ligands

Unit 3	NA 1 ZN 701 BGC 702 GOL 703
Unit 4	ZN 701