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Title | CRYOEM STRUCTURE OF POLIOVIRUS RECEPTOR BOUND TO POLIOVIRUS | |
Keywords | CD155 STRUCTURE IMMUNOGLOBULIN SUPERFAMILY, POLIOVIRUS CAPSI ROLE, CELL ADHESION, CELL MEMBRANE, GLYCOPROTEIN, HOST-VIRU INTERACTION, IMMUNOGLOBULIN DOMAIN, MEMBRANE, RECEPTOR, SEC TRANSMEMBRANE, VIRAL PROTEIN, VIRUS | |
Experiment | ELECTRON MICROSCOPY | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3EPD | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | POLIOVIRUS RECEPTOR | R | 213 | 1638 | 0 |
2 | Protein | POLIOVIRUS TYPE3 PEPTIDE | 0 | 4 | 30 | 0 |
3 | Protein | PROTEIN VP1 | 1 | 279 | 2214 | 0 |
4 | Protein | PROTEIN VP2 | 2 | 266 | 2088 | 0 |
5 | Protein | PROTEIN VP4 | 4 | 62 | 472 | 0 |
6 | Protein | PROTEIN VP3 | 3 | 235 | 1812 | 0 |
7 | Ligand | PROTEIN VP1 | 1 | 1 | 0 | 21 |
8 | Ligand | PROTEIN VP4 | 4 | 1 | 0 | 15 |
total | 1061 | 8254 | 36 |
Unit 1 | VAL30 VAL31 GLN32 ALA33 PRO34 THR35 GLN36 VAL37 PRO38 GLY39 PHE40 LEU41 GLY42 ASP43 SER44 VAL45 THR46 LEU47 PRO48 CYS49 TYR50 LEU51 GLN52 VAL53 PRO54 ASN55 MET56 GLU57 VAL58 THR59 HIS60 VAL61 SER62 GLN63 LEU64 THR65 TRP66 ALA67 ARG68 HIS69 GLY70 GLU71 SER72 GLY73 SER74 MET75 ALA76 VAL77 PHE78 HIS79 GLN80 THR81 GLN82 GLY83 PRO84 SER85 TYR86 SER87 GLU88 SER89 LYS90 ARG91 LEU92 GLU93 PHE94 VAL95 ALA96 ALA97 ARG98 LEU99 GLY100 ALA101 GLU102 LEU103 ARG104 ASP105 ALA106 SER107 LEU108 ARG109 MET110 PHE111 GLY112 LEU113 ARG114 VAL115 GLU116 ASP117 GLU118 GLY119 SER120 TYR121 THR122 CYS123 LEU124 PHE125 VAL126 THR127 PHE128 PRO129 GLN130 GLY131 SER132 ARG133 SER134 VAL135 ASP136 ILE137 TRP138 LEU139 ARG140 VAL141 LEU142 ALA143 LYS144 PRO145 GLN146 ASN147 THR148 ALA149 GLU150 VAL151 GLN152 LYS153 VAL154 GLN155 LEU156 THR157 GLY158 GLU159 PRO160 VAL161 PRO162 MET163 ALA164 ARG165 CYS166 VAL167 SER168 THR169 GLY170 GLY171 ARG172 PRO173 PRO174 ALA175 GLN176 ILE177 THR178 TRP179 HIS180 SER181 ASP182 LEU183 GLY184 GLY185 MET186 PRO187 GLN188 THR189 SER190 GLN191 VAL192 PRO193 GLY194 PHE195 LEU196 SER197 GLY198 THR199 VAL200 THR201 VAL202 THR203 SER204 LEU205 TRP206 ILE207 LEU208 VAL209 PRO210 SER211 SER212 GLN213 VAL214 ASP215 GLY216 LYS217 GLN218 VAL219 THR220 CYS221 LYS222 VAL223 GLU224 HIS225 GLU226 SER227 PHE228 GLU229 LYS230 PRO231 GLN232 LEU233 LEU234 THR235 VAL236 SER237 LEU238 THR239 VAL240 TYR241 TYR242 |
Unit 2 | ILE7 SER8 GLU9 VAL10 |
Unit 3 | GLN24 ASP25 SER26 LEU27 PRO28 ASP29 THR30 LYS31 ALA32 SER33 GLY34 PRO35 ALA36 HIS37 SER38 LYS39 GLU40 VAL41 PRO42 ALA43 LEU44 THR45 ALA46 VAL47 GLU48 THR49 GLY50 ALA51 THR52 ASN53 PRO54 LEU55 ALA56 PRO57 SER58 ASP59 THR60 VAL61 GLN62 THR63 ARG64 HIS65 VAL66 VAL67 GLN68 ARG69 ARG70 SER71 ARG72 SER73 GLU74 SER75 THR76 ILE77 GLU78 SER79 PHE80 PHE81 ALA82 ARG83 GLY84 ALA85 CYS86 VAL87 ALA88 ILE89 ILE90 GLU91 VAL92 ASP93 ASN94 GLU95 GLN96 PRO97 THR98 THR99 ARG100 ALA101 GLN102 LYS103 LEU104 PHE105 ALA106 MET107 TRP108 ARG109 ILE110 THR111 TYR112 LYS113 ASP114 THR115 VAL116 GLN117 LEU118 ARG119 ARG120 LYS121 LEU122 GLU123 PHE124 PHE125 THR126 TYR127 SER128 ARG129 PHE130 ASP131 MET132 GLU133 PHE134 THR135 PHE136 VAL137 VAL138 THR139 ALA140 ASN141 PHE142 THR143 ASN144 ALA145 ASN146 ASN147 GLY148 HIS149 ALA150 LEU151 ASN152 GLN153 VAL154 TYR155 GLN156 ILE157 MET158 TYR159 ILE160 PRO161 PRO162 GLY163 ALA164 PRO165 THR166 PRO167 LYS168 SER169 TRP170 ASP171 ASP172 TYR173 THR174 TRP175 GLN176 THR177 SER178 SER179 ASN180 PRO181 SER182 ILE183 PHE184 TYR185 THR186 TYR187 GLY188 ALA189 ALA190 PRO191 ALA192 ARG193 ILE194 SER195 VAL196 PRO197 TYR198 VAL199 GLY200 LEU201 ALA202 ASN203 ALA204 TYR205 SER206 HIS207 PHE208 TYR209 ASP210 GLY211 PHE212 ALA213 LYS214 VAL215 PRO216 LEU217 LYS218 THR219 ASP220 ALA221 ASN222 ASP223 GLN224 ILE225 GLY226 ASP227 SER228 LEU229 TYR230 SER231 ALA232 MET233 THR234 VAL235 ASP236 ASP237 PHE238 GLY239 VAL240 LEU241 ALA242 VAL243 ARG244 VAL245 VAL246 ASN247 ASP248 HIS249 ASN250 PRO251 THR252 LYS253 VAL254 THR255 SER256 LYS257 VAL258 ARG259 ILE260 TYR261 MET262 LYS263 PRO264 LYS265 HIS266 VAL267 ARG268 VAL269 TRP270 CYS271 PRO272 ARG273 PRO274 PRO275 ARG276 ALA277 VAL278 PRO279 TYR280 TYR281 GLY282 PRO283 GLY284 VAL285 ASP286 TYR287 ARG288 ASN289 ASN290 LEU291 ASP292 PRO293 LEU294 SER295 GLU296 LYS297 GLY298 LEU299 THR300 THR301 TYR302 |
Unit 4 | ALA6 CYS7 GLY8 TYR9 SER10 ASP11 ARG12 VAL13 LEU14 GLN15 LEU16 THR17 LEU18 GLY19 ASN20 SER21 THR22 ILE23 THR24 THR25 GLN26 GLU27 ALA28 ALA29 ASN30 SER31 VAL32 VAL33 ALA34 TYR35 GLY36 ARG37 TRP38 PRO39 GLU40 PHE41 ILE42 ARG43 ASP44 ASP45 GLU46 ALA47 ASN48 PRO49 VAL50 ASP51 GLN52 PRO53 THR54 GLU55 PRO56 ASP57 VAL58 ALA59 THR60 CYS61 ARG62 PHE63 TYR64 THR65 LEU66 ASP67 THR68 VAL69 MET70 TRP71 GLY72 LYS73 GLU74 SER75 LYS76 GLY77 TRP78 TRP79 TRP80 LYS81 LEU82 PRO83 ASP84 ALA85 LEU86 ARG87 ASP88 MET89 GLY90 LEU91 PHE92 GLY93 GLN94 ASN95 MET96 TYR97 TYR98 HIS99 TYR100 LEU101 GLY102 ARG103 SER104 GLY105 TYR106 THR107 VAL108 HIS109 VAL110 GLN111 CYS112 ASN113 ALA114 SER115 LYS116 PHE117 HIS118 GLN119 GLY120 ALA121 LEU122 GLY123 VAL124 PHE125 ALA126 ILE127 PRO128 GLU129 TYR130 CYS131 LEU132 ALA133 GLY134 ASP135 SER136 ASP137 LYS138 GLN139 ARG140 TYR141 THR142 SER143 TYR144 ALA145 ASN146 ALA147 ASN148 PRO149 GLY150 GLU151 ARG152 GLY153 GLY154 LYS155 PHE156 TYR157 SER158 GLN159 PHE160 ASN161 LYS162 ASP163 ASN164 ALA165 VAL166 THR167 SER168 PRO169 LYS170 ARG171 GLU172 PHE173 CYS174 PRO175 VAL176 ASP177 TYR178 LEU179 LEU180 GLY181 CYS182 GLY183 VAL184 LEU185 LEU186 GLY187 ASN188 ALA189 PHE190 VAL191 TYR192 PRO193 HIS194 GLN195 ILE196 ILE197 ASN198 LEU199 ARG200 THR201 ASN202 ASN203 SER204 ALA205 THR206 ILE207 VAL208 LEU209 PRO210 TYR211 VAL212 ASN213 ALA214 LEU215 ALA216 ILE217 ASP218 SER219 MET220 VAL221 LYS222 HIS223 ASN224 ASN225 TRP226 GLY227 ILE228 ALA229 ILE230 LEU231 PRO232 LEU233 SER234 PRO235 LEU236 ASP237 PHE238 ALA239 GLN240 ASP241 SER242 SER243 VAL244 GLU245 ILE246 PRO247 ILE248 THR249 VAL250 THR251 ILE252 ALA253 PRO254 MET255 CYS256 SER257 GLU258 PHE259 ASN260 GLY261 LEU262 ARG263 ASN264 VAL265 THR266 ALA267 PRO268 LYS269 PHE270 GLN271 |
Unit 5 | GLY2 ALA3 GLN4 VAL5 SER6 SER7 GLN8 LYS9 VAL10 GLY11 ALA12 HIS13 GLU14 ASN15 SER16 SER23 THR24 ILE25 ASN26 TYR27 THR28 THR29 ILE30 ASN31 TYR32 TYR33 LYS34 ASP35 SER36 ALA37 SER38 ASN39 ALA40 ALA41 SER42 LYS43 GLN44 ASP45 TYR46 SER47 GLN48 ASP49 PRO50 SER51 LYS52 PHE53 THR54 GLU55 PRO56 LEU57 LYS58 ASP59 VAL60 LEU61 ILE62 LYS63 THR64 ALA65 PRO66 ALA67 LEU68 ASN69 |
Unit 6 | GLY1 LEU2 PRO3 VAL4 LEU5 ASN6 THR7 PRO8 GLY9 SER10 ASN11 GLN12 TYR13 LEU14 THR15 SER16 ASP17 ASN18 HIS19 GLN20 SER21 PRO22 CYS23 ALA24 ILE25 PRO26 GLU27 PHE28 ASP29 VAL30 THR31 PRO32 PRO33 ILE34 ASP35 ILE36 PRO37 GLY38 GLU39 VAL40 LYS41 ASN42 MET43 MET44 GLU45 LEU46 ALA47 GLU48 ILE49 ASP50 THR51 MET52 ILE53 PRO54 LEU55 ASN56 LEU57 GLU58 SER59 THR60 LYS61 ARG62 ASN63 THR64 MET65 ASP66 MET67 TYR68 ARG69 VAL70 THR71 LEU72 SER73 ASP74 SER75 ALA76 ASP77 LEU78 SER79 GLN80 PRO81 ILE82 LEU83 CYS84 LEU85 SER86 LEU87 SER88 PRO89 ALA90 PHE91 ASP92 PRO93 ARG94 LEU95 SER96 HIS97 THR98 MET99 LEU100 GLY101 GLU102 VAL103 LEU104 ASN105 TYR106 TYR107 THR108 HIS109 TRP110 ALA111 GLY112 SER113 LEU114 LYS115 PHE116 THR117 PHE118 LEU119 PHE120 CYS121 GLY122 SER123 MET124 MET125 ALA126 THR127 GLY128 LYS129 ILE130 LEU131 VAL132 ALA133 TYR134 ALA135 PRO136 PRO137 GLY138 ALA139 GLN140 PRO141 PRO142 THR143 SER144 ARG145 LYS146 GLU147 ALA148 MET149 LEU150 GLY151 THR152 HIS153 VAL154 ILE155 TRP156 ASP157 LEU158 GLY159 LEU160 GLN161 SER162 SER163 CYS164 THR165 MET166 VAL167 VAL168 PRO169 TRP170 ILE171 SER172 ASN173 VAL174 THR175 TYR176 ARG177 GLN178 THR179 THR180 GLN181 ASP182 SER183 PHE184 THR185 GLU186 GLY187 GLY188 TYR189 ILE190 SER191 MET192 PHE193 TYR194 GLN195 THR196 ARG197 ILE198 VAL199 VAL200 PRO201 LEU202 SER203 THR204 PRO205 LYS206 SER207 MET208 SER209 MET210 LEU211 GLY212 PHE213 VAL214 SER215 ALA216 CYS217 ASN218 ASP219 PHE220 SER221 VAL222 ARG223 LEU224 LEU225 ARG226 ASP227 THR228 THR229 HIS230 ILE231 SER232 GLN233 SER234 ALA235 |
Unit 7 | SPH1000 |
Unit 8 | MYR1 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |