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Sequence, Chains, Asymmetric and Biological Units

Title ZP-N DOMAIN OF MAMMALIAN SPERM RECEPTOR ZP3 (CRYSTAL FORM II
Keywords FERTILIZATION, OOCYTE, EGG COAT, ZONA PELLUCIDA, VITELLINE E ZP DOMAIN, EGG-SPERM INTERACTION, SPECIES-SPECIFIC GAMETE RECOGNITION, SPECIATION, BIODIVERSITY, INFERTILITY, EXTRACE MATRIX, IMMUNOGLOBULIN-LIKE FOLD, GLYCOPROTEIN, RECEPTOR, S TRANSMEMBRANE, CELL ADHESION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3EF7     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MALTOSE-BINDING PERIPLASMIC PROTEIN, LINKER, ZONA PROTEIN 3  A 467 3623 0
2  Protein   MALTOSE-BINDING PERIPLASMIC PROTEIN, LINKER, ZONA PROTEIN 3  B 467 3623 0
3  Ligand    C 2 0 23
4  Ligand    D 2 0 23
5  Ligand   MALTOSE-BINDING PERIPLASMIC PROTEIN, LINKER, ZONA PROTEIN 3  A 7 0 7
6  Ligand   MALTOSE-BINDING PERIPLASMIC PROTEIN, LINKER, ZONA PROTEIN 3  B 10 0 10
7 Water     2 0 2
total       957 7246 65
Proteins
Unit 1 MET1 LYS2 THR3 GLU4 GLU5 GLY6 LYS7 LEU8 VAL9 ILE10 TRP11 ILE12 ASN13 GLY14 ASP15 LYS16 GLY17 TYR18 ASN19 GLY20 LEU21 ALA22 GLU23 VAL24 GLY25 LYS26 LYS27 PHE28 GLU29 LYS30 ASP31 THR32 GLY33 ILE34 LYS35 VAL36 THR37 VAL38 GLU39 HIS40 PRO41 ASP42 LYS43 LEU44 GLU45 GLU46 LYS47 PHE48 PRO49 GLN50 VAL51 ALA52 ALA53 THR54 GLY55 ASP56 GLY57 PRO58 ASP59 ILE60 ILE61 PHE62 TRP63 ALA64 HIS65 ASP66 ARG67 PHE68 GLY69 GLY70 TYR71 ALA72 GLN73 SER74 GLY75 LEU76 LEU77 ALA78 GLU79 ILE80 THR81 PRO82 ASP83 LYS84 ALA85 PHE86 GLN87 ASP88 LYS89 LEU90 TYR91 PRO92 PHE93 THR94 TRP95 ASP96 ALA97 VAL98 ARG99 TYR100 ASN101 GLY102 LYS103 LEU104 ILE105 ALA106 TYR107 PRO108 ILE109 ALA110 VAL111 GLU112 ALA113 LEU114 SER115 LEU116 ILE117 TYR118 ASN119 LYS120 ASP121 LEU122 LEU123 PRO124 ASN125 PRO126 PRO127 LYS128 THR129 TRP130 GLU131 GLU132 ILE133 PRO134 ALA135 LEU136 ASP137 LYS138 GLU139 LEU140 LYS141 ALA142 LYS143 GLY144 LYS145 SER146 ALA147 LEU148 MET149 PHE150 ASN151 LEU152 GLN153 GLU154 PRO155 TYR156 PHE157 THR158 TRP159 PRO160 LEU161 ILE162 ALA163 ALA164 ASP165 GLY166 GLY167 TYR168 ALA169 PHE170 LYS171 TYR172 GLU173 ASN174 GLY175 LYS176 TYR177 ASP178 ILE179 LYS180 ASP181 VAL182 GLY183 VAL184 ASP185 ASN186 ALA187 GLY188 ALA189 LYS190 ALA191 GLY192 LEU193 THR194 PHE195 LEU196 VAL197 ASP198 LEU199 ILE200 LYS201 ASN202 LYS203 HIS204 MET205 ASN206 ALA207 ASP208 THR209 ASP210 TYR211 SER212 ILE213 ALA214 GLU215 ALA216 ALA217 PHE218 ASN219 LYS220 GLY221 GLU222 THR223 ALA224 MET225 THR226 ILE227 ASN228 GLY229 PRO230 TRP231 ALA232 TRP233 SER234 ASN235 ILE236 ASP237 THR238 SER239 LYS240 VAL241 ASN242 TYR243 GLY244 VAL245 THR246 VAL247 LEU248 PRO249 THR250 PHE251 LYS252 GLY253 GLN254 PRO255 SER256 LYS257 PRO258 PHE259 VAL260 GLY261 VAL262 LEU263 SER264 ALA265 GLY266 ILE267 ASN268 ALA269 ALA270 SER271 PRO272 ASN273 LYS274 GLU275 LEU276 ALA277 LYS278 GLU279 PHE280 LEU281 GLU282 ASN283 TYR284 LEU285 LEU286 THR287 ASP288 GLU289 GLY290 LEU291 GLU292 ALA293 VAL294 ASN295 LYS296 ASP297 LYS298 PRO299 LEU300 GLY301 ALA302 VAL303 ALA304 LEU305 LYS306 SER307 TYR308 GLU309 GLU310 GLU311 LEU312 ALA313 LYS314 ASP315 PRO316 ARG317 ILE318 ALA319 ALA320 THR321 MET322 GLU323 ASN324 ALA325 GLN326 LYS327 GLY328 GLU329 ILE330 MET331 PRO332 ASN333 ILE334 PRO335 GLN336 MET337 SER338 ALA339 PHE340 TRP341 TYR342 ALA343 VAL344 ARG345 THR346 ALA347 VAL348 ILE349 ASN350 ALA351 ALA352 SER353 GLY354 ARG355 GLN356 THR357 VAL358 ASP359 ALA360 ALA361 LEU362 ALA363 ALA364 ALA365 GLN366 THR367 ASN368 ALA369 ALA370 ALA371 VAL372 LYS373 VAL374 GLU375 CYS376 LEU377 GLU378 ALA379 GLU380 LEU381 VAL382 VAL383 THR384 VAL385 SER386 ARG387 ASP388 LEU389 PHE390 GLY391 THR392 GLY393 LYS394 LEU395 VAL396 GLN397 PRO398 GLY399 ASP400 LEU401 THR402 LEU403 GLY404 SER405 GLU406 GLY407 CYS408 GLN409 PRO410 ARG411 VAL412 SER413 VAL414 ASP415 THR416 ASP417 VAL418 VAL419 ARG420 PHE421 ASN422 ALA423 GLN424 LEU425 HIS426 GLU427 CYS428 SER429 SER430 ARG431 VAL432 GLN433 MET434 THR435 LYS436 ASP437 ALA438 LEU439 VAL440 TYR441 SER442 THR443 PHE444 LEU445 LEU446 HIS447 ASP448 ARG462 VAL463 GLU464 VAL465 PRO466 ILE467 GLU468 CYS469 ARG470 TYR471 PRO472 ARG473 LEU474 GLU475 HIS476 HIS477 HIS478 HIS479 HIS480
Unit 2 MET1 LYS2 THR3 GLU4 GLU5 GLY6 LYS7 LEU8 VAL9 ILE10 TRP11 ILE12 ASN13 GLY14 ASP15 LYS16 GLY17 TYR18 ASN19 GLY20 LEU21 ALA22 GLU23 VAL24 GLY25 LYS26 LYS27 PHE28 GLU29 LYS30 ASP31 THR32 GLY33 ILE34 LYS35 VAL36 THR37 VAL38 GLU39 HIS40 PRO41 ASP42 LYS43 LEU44 GLU45 GLU46 LYS47 PHE48 PRO49 GLN50 VAL51 ALA52 ALA53 THR54 GLY55 ASP56 GLY57 PRO58 ASP59 ILE60 ILE61 PHE62 TRP63 ALA64 HIS65 ASP66 ARG67 PHE68 GLY69 GLY70 TYR71 ALA72 GLN73 SER74 GLY75 LEU76 LEU77 ALA78 GLU79 ILE80 THR81 PRO82 ASP83 LYS84 ALA85 PHE86 GLN87 ASP88 LYS89 LEU90 TYR91 PRO92 PHE93 THR94 TRP95 ASP96 ALA97 VAL98 ARG99 TYR100 ASN101 GLY102 LYS103 LEU104 ILE105 ALA106 TYR107 PRO108 ILE109 ALA110 VAL111 GLU112 ALA113 LEU114 SER115 LEU116 ILE117 TYR118 ASN119 LYS120 ASP121 LEU122 LEU123 PRO124 ASN125 PRO126 PRO127 LYS128 THR129 TRP130 GLU131 GLU132 ILE133 PRO134 ALA135 LEU136 ASP137 LYS138 GLU139 LEU140 LYS141 ALA142 LYS143 GLY144 LYS145 SER146 ALA147 LEU148 MET149 PHE150 ASN151 LEU152 GLN153 GLU154 PRO155 TYR156 PHE157 THR158 TRP159 PRO160 LEU161 ILE162 ALA163 ALA164 ASP165 GLY166 GLY167 TYR168 ALA169 PHE170 LYS171 TYR172 GLU173 ASN174 GLY175 LYS176 TYR177 ASP178 ILE179 LYS180 ASP181 VAL182 GLY183 VAL184 ASP185 ASN186 ALA187 GLY188 ALA189 LYS190 ALA191 GLY192 LEU193 THR194 PHE195 LEU196 VAL197 ASP198 LEU199 ILE200 LYS201 ASN202 LYS203 HIS204 MET205 ASN206 ALA207 ASP208 THR209 ASP210 TYR211 SER212 ILE213 ALA214 GLU215 ALA216 ALA217 PHE218 ASN219 LYS220 GLY221 GLU222 THR223 ALA224 MET225 THR226 ILE227 ASN228 GLY229 PRO230 TRP231 ALA232 TRP233 SER234 ASN235 ILE236 ASP237 THR238 SER239 LYS240 VAL241 ASN242 TYR243 GLY244 VAL245 THR246 VAL247 LEU248 PRO249 THR250 PHE251 LYS252 GLY253 GLN254 PRO255 SER256 LYS257 PRO258 PHE259 VAL260 GLY261 VAL262 LEU263 SER264 ALA265 GLY266 ILE267 ASN268 ALA269 ALA270 SER271 PRO272 ASN273 LYS274 GLU275 LEU276 ALA277 LYS278 GLU279 PHE280 LEU281 GLU282 ASN283 TYR284 LEU285 LEU286 THR287 ASP288 GLU289 GLY290 LEU291 GLU292 ALA293 VAL294 ASN295 LYS296 ASP297 LYS298 PRO299 LEU300 GLY301 ALA302 VAL303 ALA304 LEU305 LYS306 SER307 TYR308 GLU309 GLU310 GLU311 LEU312 ALA313 LYS314 ASP315 PRO316 ARG317 ILE318 ALA319 ALA320 THR321 MET322 GLU323 ASN324 ALA325 GLN326 LYS327 GLY328 GLU329 ILE330 MET331 PRO332 ASN333 ILE334 PRO335 GLN336 MET337 SER338 ALA339 PHE340 TRP341 TYR342 ALA343 VAL344 ARG345 THR346 ALA347 VAL348 ILE349 ASN350 ALA351 ALA352 SER353 GLY354 ARG355 GLN356 THR357 VAL358 ASP359 ALA360 ALA361 LEU362 ALA363 ALA364 ALA365 GLN366 THR367 ASN368 ALA369 ALA370 ALA371 VAL372 LYS373 VAL374 GLU375 CYS376 LEU377 GLU378 ALA379 GLU380 LEU381 VAL382 VAL383 THR384 VAL385 SER386 ARG387 ASP388 LEU389 PHE390 GLY391 THR392 GLY393 LYS394 LEU395 VAL396 GLN397 PRO398 GLY399 ASP400 LEU401 THR402 LEU403 GLY404 SER405 GLU406 GLY407 CYS408 GLN409 PRO410 ARG411 VAL412 SER413 VAL414 ASP415 THR416 ASP417 VAL418 VAL419 ARG420 PHE421 ASN422 ALA423 GLN424 LEU425 HIS426 GLU427 CYS428 SER429 SER430 ARG431 VAL432 GLN433 MET434 THR435 LYS436 ASP437 ALA438 LEU439 VAL440 TYR441 SER442 THR443 PHE444 LEU445 LEU446 HIS447 ASP448 ARG462 VAL463 GLU464 VAL465 PRO466 ILE467 GLU468 CYS469 ARG470 TYR471 PRO472 ARG473 LEU474 GLU475 HIS476 HIS477 HIS478 HIS479 HIS480
Ligands
Unit 3 GLC1 GLC2
Unit 4 GLC1 GLC2
Unit 5 ZN484 ZN485 ZN486 CA487 CA488 ZN489 ZN490
Unit 6 ZN483 ZN484 ZN485 ZN486 ZN487 ZN488 ZN489 ZN491 CA492 CA493
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany