3EDM - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF A SHORT CHAIN DEHYDROGENASE FROM AGROBA TUMEFACIENS
• Keywords: STRUCTURAL GENOMICS, DEHYDROGENASE, OXIDOREDUCTASE, PSI-2, P STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRU GENOMICS, NYSGXRC
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3EDM	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	SHORT CHAIN DEHYDROGENASE	A	226	1609	0
2	Protein	SHORT CHAIN DEHYDROGENASE	B	227	1620	0
3	Protein	SHORT CHAIN DEHYDROGENASE	C	214	1513	0
4	Protein	SHORT CHAIN DEHYDROGENASE	D	213	1511	0
5	Water			189	0	189
total				1069	6253	189

Proteins

Unit 1	GLN 2 ARG 3 PHE 4 THR 5 ASN 6 ARG 7 THR 8 ILE 9 VAL 10 VAL 11 ALA 12 GLY 13 ALA 14 GLY 15 ARG 16 ASP 17 ILE 18 GLY 19 ARG 20 ALA 21 CYS 22 ALA 23 ILE 24 ARG 25 PHE 26 ALA 27 GLN 28 GLU 29 GLY 30 ALA 31 ASN 32 VAL 33 VAL 34 LEU 35 THR 36 TYR 37 ASN 38 GLY 39 ALA 40 ALA 41 GLU 42 GLY 43 ALA 44 ALA 45 THR 46 ALA 47 VAL 48 ALA 49 GLU 50 ILE 51 GLU 52 LYS 53 LEU 54 GLY 55 ARG 56 SER 57 ALA 58 LEU 59 ALA 60 ILE 61 LYS 62 ALA 63 ASP 64 LEU 65 THR 66 ASN 67 ALA 68 ALA 69 GLU 70 VAL 71 GLU 72 ALA 73 ALA 74 ILE 75 SER 76 ALA 77 ALA 78 ALA 79 ASP 80 LYS 81 PHE 82 GLY 83 GLU 84 ILE 85 HIS 86 GLY 87 LEU 88 VAL 89 HIS 90 VAL 91 ALA 92 GLY 93 GLY 94 LEU 95 ILE 96 ALA 97 ARG 98 LYS 99 THR 100 ILE 101 ALA 102 GLU 103 MET 104 ASP 105 GLU 106 ALA 107 PHE 108 TRP 109 HIS 110 GLN 111 VAL 112 LEU 113 ASP 114 VAL 115 ASN 116 LEU 117 THR 118 SER 119 LEU 120 PHE 121 LEU 122 THR 123 ALA 124 LYS 125 THR 126 ALA 127 LEU 128 PRO 129 LYS 130 MET 131 ALA 132 LYS 133 GLY 134 GLY 135 ALA 136 ILE 137 VAL 138 THR 139 PHE 140 SER 141 SER 142 GLN 143 ALA 144 GLY 145 ARG 146 ASP 147 GLY 148 GLY 149 GLY 150 PRO 151 GLY 152 ALA 153 LEU 154 ALA 155 TYR 156 ALA 157 THR 158 SER 159 LYS 160 GLY 161 ALA 162 VAL 163 MET 164 THR 165 PHE 166 THR 167 ARG 168 GLY 169 LEU 170 ALA 171 LYS 172 GLU 173 VAL 174 GLY 175 PRO 176 LYS 177 ILE 178 ARG 179 VAL 180 ASN 181 ALA 182 VAL 183 CYS 184 PRO 185 GLY 186 MET 187 ILE 188 SER 189 THR 190 ARG 213 GLU 214 GLY 215 SER 216 SER 217 GLU 218 ASP 219 VAL 220 ALA 221 GLY 222 LEU 223 VAL 224 ALA 225 PHE 226 LEU 227 ALA 228 SER 229 ASP 230 ASP 231 ALA 232 ALA 233 TYR 234 VAL 235 THR 236 GLY 237 ALA 238 CYS 239 TYR 240 ASP 241 ILE 242 ASN 243 GLY 244 GLY 245 VAL 246 LEU 247 PHE 248 SER 249
Unit 2	GLN 2 ARG 3 PHE 4 THR 5 ASN 6 ARG 7 THR 8 ILE 9 VAL 10 VAL 11 ALA 12 GLY 13 ALA 14 GLY 15 ARG 16 ASP 17 ILE 18 GLY 19 ARG 20 ALA 21 CYS 22 ALA 23 ILE 24 ARG 25 PHE 26 ALA 27 GLN 28 GLU 29 GLY 30 ALA 31 ASN 32 VAL 33 VAL 34 LEU 35 THR 36 TYR 37 ASN 38 GLY 39 ALA 40 ALA 41 GLU 42 GLY 43 ALA 44 ALA 45 THR 46 ALA 47 VAL 48 ALA 49 GLU 50 ILE 51 GLU 52 LYS 53 LEU 54 GLY 55 ARG 56 SER 57 ALA 58 LEU 59 ALA 60 ILE 61 LYS 62 ALA 63 ASP 64 LEU 65 THR 66 ASN 67 ALA 68 ALA 69 GLU 70 VAL 71 GLU 72 ALA 73 ALA 74 ILE 75 SER 76 ALA 77 ALA 78 ALA 79 ASP 80 LYS 81 PHE 82 GLY 83 GLU 84 ILE 85 HIS 86 GLY 87 LEU 88 VAL 89 HIS 90 VAL 91 ALA 92 GLY 93 GLY 94 LEU 95 ILE 96 ALA 97 ARG 98 LYS 99 THR 100 ILE 101 ALA 102 GLU 103 MET 104 ASP 105 GLU 106 ALA 107 PHE 108 TRP 109 HIS 110 GLN 111 VAL 112 LEU 113 ASP 114 VAL 115 ASN 116 LEU 117 THR 118 SER 119 LEU 120 PHE 121 LEU 122 THR 123 ALA 124 LYS 125 THR 126 ALA 127 LEU 128 PRO 129 LYS 130 MET 131 ALA 132 LYS 133 GLY 134 GLY 135 ALA 136 ILE 137 VAL 138 THR 139 PHE 140 SER 141 SER 142 GLN 143 ALA 144 GLY 145 ARG 146 ASP 147 GLY 148 GLY 149 GLY 150 PRO 151 GLY 152 ALA 153 LEU 154 ALA 155 TYR 156 ALA 157 THR 158 SER 159 LYS 160 GLY 161 ALA 162 VAL 163 MET 164 THR 165 PHE 166 THR 167 ARG 168 GLY 169 LEU 170 ALA 171 LYS 172 GLU 173 VAL 174 GLY 175 PRO 176 LYS 177 ILE 178 ARG 179 VAL 180 ASN 181 ALA 182 VAL 183 CYS 184 PRO 185 GLY 186 MET 187 ILE 188 SER 189 THR 190 THR 191 ARG 213 GLU 214 GLY 215 SER 216 SER 217 GLU 218 ASP 219 VAL 220 ALA 221 GLY 222 LEU 223 VAL 224 ALA 225 PHE 226 LEU 227 ALA 228 SER 229 ASP 230 ASP 231 ALA 232 ALA 233 TYR 234 VAL 235 THR 236 GLY 237 ALA 238 CYS 239 TYR 240 ASP 241 ILE 242 ASN 243 GLY 244 GLY 245 VAL 246 LEU 247 PHE 248 SER 249
Unit 3	GLN 2 ARG 3 PHE 4 THR 5 ASN 6 ARG 7 THR 8 ILE 9 VAL 10 VAL 11 ALA 12 GLY 13 ALA 14 GLY 15 ARG 16 ASP 17 ILE 18 GLY 19 ARG 20 ALA 21 CYS 22 ALA 23 ILE 24 ARG 25 PHE 26 ALA 27 GLN 28 GLU 29 GLY 30 ALA 31 ASN 32 VAL 33 VAL 34 LEU 35 THR 36 TYR 37 ASN 38 GLY 39 ALA 40 ALA 41 GLU 42 GLY 43 ALA 44 ALA 45 THR 46 ALA 47 VAL 48 ALA 49 GLU 50 ILE 51 GLU 52 LYS 53 LEU 54 GLY 55 ARG 56 SER 57 ALA 58 LEU 59 ALA 60 ILE 61 LYS 62 ALA 63 ASP 64 LEU 65 THR 66 ASN 67 ALA 68 ALA 69 GLU 70 VAL 71 GLU 72 ALA 73 ALA 74 ILE 75 SER 76 ALA 77 ALA 78 ALA 79 ASP 80 LYS 81 PHE 82 GLY 83 GLU 84 ILE 85 HIS 86 GLY 87 LEU 88 VAL 89 HIS 90 VAL 91 ALA 92 GLY 93 GLY 94 LEU 95 ILE 96 ALA 97 ARG 98 LYS 99 THR 100 ILE 101 ALA 102 GLU 103 MET 104 ASP 105 GLU 106 ALA 107 PHE 108 TRP 109 HIS 110 GLN 111 VAL 112 LEU 113 ASP 114 VAL 115 ASN 116 LEU 117 THR 118 SER 119 LEU 120 PHE 121 LEU 122 THR 123 ALA 124 LYS 125 THR 126 ALA 127 LEU 128 PRO 129 LYS 130 MET 131 ALA 132 LYS 133 GLY 134 GLY 135 ALA 136 ILE 137 VAL 138 THR 139 PHE 140 SER 141 SER 142 GLN 143 ALA 144 GLY 145 ARG 146 ASP 147 GLY 148 GLY 149 GLY 150 PRO 151 GLY 152 ALA 153 LEU 154 ALA 155 TYR 156 ALA 157 THR 158 SER 159 LYS 160 GLY 161 ALA 162 VAL 163 MET 164 THR 165 PHE 166 THR 167 ARG 168 GLY 169 LEU 170 ALA 171 LYS 172 GLU 173 VAL 174 GLY 175 PRO 176 LYS 177 ILE 178 ARG 179 VAL 180 ASN 181 ALA 182 VAL 183 CYS 184 PRO 185 GLY 215 SER 216 SER 217 GLU 218 ASP 219 VAL 220 ALA 221 GLY 222 LEU 223 VAL 224 ALA 225 PHE 226 LEU 227 ALA 228 SER 229 ASP 230 ASP 231 ALA 232 ALA 233 TYR 234 VAL 235 THR 236 GLY 237 ALA 238 CYS 239 TYR 240 ASP 241 ILE 242 ASN 243 GLY 244
Unit 4	GLN 2 ARG 3 PHE 4 THR 5 ASN 6 ARG 7 THR 8 ILE 9 VAL 10 VAL 11 ALA 12 GLY 13 ALA 14 GLY 15 ARG 16 ASP 17 ILE 18 GLY 19 ARG 20 ALA 21 CYS 22 ALA 23 ILE 24 ARG 25 PHE 26 ALA 27 GLN 28 GLU 29 GLY 30 ALA 31 ASN 32 VAL 33 VAL 34 LEU 35 THR 36 TYR 37 ASN 38 GLY 39 ALA 41 GLU 42 GLY 43 ALA 44 ALA 45 THR 46 ALA 47 VAL 48 ALA 49 GLU 50 ILE 51 GLU 52 LYS 53 LEU 54 GLY 55 ARG 56 SER 57 ALA 58 LEU 59 ALA 60 ILE 61 LYS 62 ALA 63 ASP 64 LEU 65 THR 66 ASN 67 ALA 68 ALA 69 GLU 70 VAL 71 GLU 72 ALA 73 ALA 74 ILE 75 SER 76 ALA 77 ALA 78 ALA 79 ASP 80 LYS 81 PHE 82 GLY 83 GLU 84 ILE 85 HIS 86 GLY 87 LEU 88 VAL 89 HIS 90 VAL 91 ALA 92 GLY 93 GLY 94 LEU 95 ILE 96 ALA 97 ARG 98 LYS 99 THR 100 ILE 101 ALA 102 GLU 103 MET 104 ASP 105 GLU 106 ALA 107 PHE 108 TRP 109 HIS 110 GLN 111 VAL 112 LEU 113 ASP 114 VAL 115 ASN 116 LEU 117 THR 118 SER 119 LEU 120 PHE 121 LEU 122 THR 123 ALA 124 LYS 125 THR 126 ALA 127 LEU 128 PRO 129 LYS 130 MET 131 ALA 132 LYS 133 GLY 134 GLY 135 ALA 136 ILE 137 VAL 138 THR 139 PHE 140 SER 141 SER 142 GLN 143 ALA 144 GLY 145 ARG 146 ASP 147 GLY 148 GLY 149 GLY 150 PRO 151 GLY 152 ALA 153 LEU 154 ALA 155 TYR 156 ALA 157 THR 158 SER 159 LYS 160 GLY 161 ALA 162 VAL 163 MET 164 THR 165 PHE 166 THR 167 ARG 168 GLY 169 LEU 170 ALA 171 LYS 172 GLU 173 VAL 174 GLY 175 PRO 176 LYS 177 ILE 178 ARG 179 VAL 180 ASN 181 ALA 182 VAL 183 CYS 184 PRO 185 GLY 215 SER 216 SER 217 GLU 218 ASP 219 VAL 220 ALA 221 GLY 222 LEU 223 VAL 224 ALA 225 PHE 226 LEU 227 ALA 228 SER 229 ASP 230 ASP 231 ALA 232 ALA 233 TYR 234 VAL 235 THR 236 GLY 237 ALA 238 CYS 239 TYR 240 ASP 241 ILE 242 ASN 243 GLY 244