3ED8 - Sequence, Chains, Asymmetric and Biological Units

• Title: APPLICATION OF THE SUPERFOLDER YFP BIMOLECULAR FLUORESCENCE COMPLEMENTATION FOR STUDYING PROTEIN-PROTEIN INTERACTIONS I
• Keywords: SUPERFOLDER, BIMOLECULAR FLUORESCENCE COMPLEMENTATION, LUMIN PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3ED8	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	YELLOW FLUORESCENCE PROTEIN	A	229	1780	19
2	Protein	YELLOW FLUORESCENCE PROTEIN	B	228	1759	19
3	Protein	YELLOW FLUORESCENCE PROTEIN	C	231	1771	19
4	Protein	YELLOW FLUORESCENCE PROTEIN	D	229	1763	19
5	Protein	YELLOW FLUORESCENCE PROTEIN	E	222	1647	19
6	Water			188	0	188
total				1327	8720	283

Proteins

Unit 1	SER 2 LYS 3 GLY 4 GLU 5 GLU 6 LEU 7 PHE 8 THR 9 GLY 10 VAL 11 VAL 12 PRO 13 ILE 14 LEU 15 VAL 16 GLU 17 LEU 18 ASP 19 GLY 20 ASP 21 VAL 22 ASN 23 GLY 24 HIS 25 LYS 26 PHE 27 SER 28 VAL 29 ARG 30 GLY 31 GLU 32 GLY 33 GLU 34 GLY 35 ASP 36 ALA 37 THR 38 ILE 39 GLY 40 LYS 41 LEU 42 THR 43 LEU 44 LYS 45 PHE 46 ILE 47 CYS 48 THR 49 THR 50 GLY 51 LYS 52 LEU 53 PRO 54 VAL 55 PRO 56 TRP 57 PRO 58 THR 59 LEU 60 VAL 61 THR 62 THR 63 LEU 64 CRO 66 LEU 68 GLN 69 CYS 70 PHE 71 ALA 72 ARG 73 TYR 74 PRO 75 ASP 76 HIS 77 MET 78 LYS 79 GLN 80 HIS 81 ASP 82 PHE 83 PHE 84 LYS 85 SER 86 ALA 87 MET 88 PRO 89 GLU 90 GLY 91 TYR 92 VAL 93 GLN 94 GLU 95 ARG 96 THR 97 ILE 98 SER 99 PHE 100 LYS 101 ASP 102 ASP 103 GLY 104 LYS 105 TYR 106 LYS 107 THR 108 ARG 109 ALA 110 VAL 111 VAL 112 LYS 113 PHE 114 GLU 115 GLY 116 ASP 117 THR 118 LEU 119 VAL 120 ASN 121 ARG 122 ILE 123 GLU 124 LEU 125 LYS 126 GLY 127 THR 128 ASP 129 PHE 130 LYS 131 GLU 132 ASP 133 GLY 134 ASN 135 ILE 136 LEU 137 GLY 138 HIS 139 LYS 140 LEU 141 GLU 142 TYR 143 ASN 144 PHE 145 ASN 146 SER 147 HIS 148 ASN 149 VAL 150 TYR 151 ILE 152 THR 153 ALA 154 THR 155 ARG 156 GLY 157 THR 158 GLN 181 LYS 182 ASN 183 GLY 184 ILE 185 LYS 186 ALA 187 ASN 188 PHE 189 THR 190 VAL 191 ARG 192 HIS 193 ASN 194 VAL 195 GLU 196 ASP 197 GLY 198 SER 199 VAL 200 GLN 201 LEU 202 ALA 203 ASP 204 HIS 205 TYR 206 GLN 207 GLN 208 ASN 209 THR 210 PRO 211 ILE 212 GLY 213 ASP 214 GLY 215 PRO 216 VAL 217 LEU 218 LEU 219 PRO 220 ASP 221 ASN 222 HIS 223 TYR 224 LEU 225 SER 226 TYR 227 GLN 228 THR 229 VAL 230 LEU 231 SER 232 LYS 233 ASP 234 PRO 235 ASN 236 GLU 237 LYS 238 ARG 239 ASP 240 HIS 241 MET 242 VAL 243 LEU 244 LEU 245 GLU 246 PHE 247 VAL 248 THR 249 ALA 250 ALA 251 GLY 252 ILE 253 THR 254
Unit 2	SER 2 LYS 3 GLY 4 GLU 5 GLU 6 LEU 7 PHE 8 THR 9 GLY 10 VAL 11 VAL 12 PRO 13 ILE 14 LEU 15 VAL 16 GLU 17 LEU 18 ASP 19 GLY 20 ASP 21 VAL 22 ASN 23 GLY 24 HIS 25 LYS 26 PHE 27 SER 28 VAL 29 ARG 30 GLY 31 GLU 32 GLY 33 GLU 34 GLY 35 ASP 36 ALA 37 THR 38 ILE 39 GLY 40 LYS 41 LEU 42 THR 43 LEU 44 LYS 45 PHE 46 ILE 47 CYS 48 THR 49 THR 50 GLY 51 LYS 52 LEU 53 PRO 54 VAL 55 PRO 56 TRP 57 PRO 58 THR 59 LEU 60 VAL 61 THR 62 THR 63 LEU 64 CRO 66 LEU 68 GLN 69 CYS 70 PHE 71 ALA 72 ARG 73 TYR 74 PRO 75 ASP 76 HIS 77 MET 78 LYS 79 GLN 80 HIS 81 ASP 82 PHE 83 PHE 84 LYS 85 SER 86 ALA 87 MET 88 PRO 89 GLU 90 GLY 91 TYR 92 VAL 93 GLN 94 GLU 95 ARG 96 THR 97 ILE 98 SER 99 PHE 100 LYS 101 ASP 102 ASP 103 GLY 104 LYS 105 TYR 106 LYS 107 THR 108 ARG 109 ALA 110 VAL 111 VAL 112 LYS 113 PHE 114 GLU 115 GLY 116 ASP 117 THR 118 LEU 119 VAL 120 ASN 121 ARG 122 ILE 123 GLU 124 LEU 125 LYS 126 GLY 127 THR 128 ASP 129 PHE 130 LYS 131 GLU 132 ASP 133 GLY 134 ASN 135 ILE 136 LEU 137 GLY 138 HIS 139 LYS 140 LEU 141 GLU 142 TYR 143 ASN 144 PHE 145 ASN 146 SER 147 HIS 148 ASN 149 VAL 150 TYR 151 ILE 152 THR 153 ALA 154 THR 155 ARG 156 GLY 157 LYS 182 ASN 183 GLY 184 ILE 185 LYS 186 ALA 187 ASN 188 PHE 189 THR 190 VAL 191 ARG 192 HIS 193 ASN 194 VAL 195 GLU 196 ASP 197 GLY 198 SER 199 VAL 200 GLN 201 LEU 202 ALA 203 ASP 204 HIS 205 TYR 206 GLN 207 GLN 208 ASN 209 THR 210 PRO 211 ILE 212 GLY 213 ASP 214 GLY 215 PRO 216 VAL 217 LEU 218 LEU 219 PRO 220 ASP 221 ASN 222 HIS 223 TYR 224 LEU 225 SER 226 TYR 227 GLN 228 THR 229 VAL 230 LEU 231 SER 232 LYS 233 ASP 234 PRO 235 ASN 236 GLU 237 LYS 238 ARG 239 ASP 240 HIS 241 MET 242 VAL 243 LEU 244 LEU 245 GLU 246 PHE 247 VAL 248 THR 249 ALA 250 ALA 251 GLY 252 ILE 253 THR 254 LEU 255
Unit 3	SER 2 LYS 3 GLY 4 GLU 5 GLU 6 LEU 7 PHE 8 THR 9 GLY 10 VAL 11 VAL 12 PRO 13 ILE 14 LEU 15 VAL 16 GLU 17 LEU 18 ASP 19 GLY 20 ASP 21 VAL 22 ASN 23 GLY 24 HIS 25 LYS 26 PHE 27 SER 28 VAL 29 ARG 30 GLY 31 GLU 32 GLY 33 GLU 34 GLY 35 ASP 36 ALA 37 THR 38 ILE 39 GLY 40 LYS 41 LEU 42 THR 43 LEU 44 LYS 45 PHE 46 ILE 47 CYS 48 THR 49 THR 50 GLY 51 LYS 52 LEU 53 PRO 54 VAL 55 PRO 56 TRP 57 PRO 58 THR 59 LEU 60 VAL 61 THR 62 THR 63 LEU 64 CRO 66 LEU 68 GLN 69 CYS 70 PHE 71 ALA 72 ARG 73 TYR 74 PRO 75 ASP 76 HIS 77 MET 78 LYS 79 GLN 80 HIS 81 ASP 82 PHE 83 PHE 84 LYS 85 SER 86 ALA 87 MET 88 PRO 89 GLU 90 GLY 91 TYR 92 VAL 93 GLN 94 GLU 95 ARG 96 THR 97 ILE 98 SER 99 PHE 100 LYS 101 ASP 102 ASP 103 GLY 104 LYS 105 TYR 106 LYS 107 THR 108 ARG 109 ALA 110 VAL 111 VAL 112 LYS 113 PHE 114 GLU 115 GLY 116 ASP 117 THR 118 LEU 119 VAL 120 ASN 121 ARG 122 ILE 123 GLU 124 LEU 125 LYS 126 GLY 127 THR 128 ASP 129 PHE 130 LYS 131 GLU 132 ASP 133 GLY 134 ASN 135 ILE 136 LEU 137 GLY 138 HIS 139 LYS 140 LEU 141 GLU 142 TYR 143 ASN 144 PHE 145 ASN 146 SER 147 HIS 148 ASN 149 VAL 150 TYR 151 ILE 152 THR 153 ALA 154 THR 155 ARG 156 GLY 157 THR 158 LYS 180 GLN 181 LYS 182 ASN 183 GLY 184 ILE 185 LYS 186 ALA 187 ASN 188 PHE 189 THR 190 VAL 191 ARG 192 HIS 193 ASN 194 VAL 195 GLU 196 ASP 197 GLY 198 SER 199 VAL 200 GLN 201 LEU 202 ALA 203 ASP 204 HIS 205 TYR 206 GLN 207 GLN 208 ASN 209 THR 210 PRO 211 ILE 212 GLY 213 ASP 214 GLY 215 PRO 216 VAL 217 LEU 218 LEU 219 PRO 220 ASP 221 ASN 222 HIS 223 TYR 224 LEU 225 SER 226 TYR 227 GLN 228 THR 229 VAL 230 LEU 231 SER 232 LYS 233 ASP 234 PRO 235 ASN 236 GLU 237 LYS 238 ARG 239 ASP 240 HIS 241 MET 242 VAL 243 LEU 244 LEU 245 GLU 246 PHE 247 VAL 248 THR 249 ALA 250 ALA 251 GLY 252 ILE 253 THR 254 LEU 255
Unit 4	SER 2 LYS 3 GLY 4 GLU 5 GLU 6 LEU 7 PHE 8 THR 9 GLY 10 VAL 11 VAL 12 PRO 13 ILE 14 LEU 15 VAL 16 GLU 17 LEU 18 ASP 19 GLY 20 ASP 21 VAL 22 ASN 23 GLY 24 HIS 25 LYS 26 PHE 27 SER 28 VAL 29 ARG 30 GLY 31 GLU 32 GLY 33 GLU 34 GLY 35 ASP 36 ALA 37 THR 38 ILE 39 GLY 40 LYS 41 LEU 42 THR 43 LEU 44 LYS 45 PHE 46 ILE 47 CYS 48 THR 49 THR 50 GLY 51 LYS 52 LEU 53 PRO 54 VAL 55 PRO 56 TRP 57 PRO 58 THR 59 LEU 60 VAL 61 THR 62 THR 63 LEU 64 CRO 66 LEU 68 GLN 69 CYS 70 PHE 71 ALA 72 ARG 73 TYR 74 PRO 75 ASP 76 HIS 77 MET 78 LYS 79 GLN 80 HIS 81 ASP 82 PHE 83 PHE 84 LYS 85 SER 86 ALA 87 MET 88 PRO 89 GLU 90 GLY 91 TYR 92 VAL 93 GLN 94 GLU 95 ARG 96 THR 97 ILE 98 SER 99 PHE 100 LYS 101 ASP 102 ASP 103 GLY 104 LYS 105 TYR 106 LYS 107 THR 108 ARG 109 ALA 110 VAL 111 VAL 112 LYS 113 PHE 114 GLU 115 GLY 116 ASP 117 THR 118 LEU 119 VAL 120 ASN 121 ARG 122 ILE 123 GLU 124 LEU 125 LYS 126 GLY 127 THR 128 ASP 129 PHE 130 LYS 131 GLU 132 ASP 133 GLY 134 ASN 135 ILE 136 LEU 137 GLY 138 HIS 139 LYS 140 LEU 141 GLU 142 TYR 143 ASN 144 PHE 145 ASN 146 SER 147 HIS 148 ASN 149 VAL 150 TYR 151 ILE 152 THR 153 ALA 154 THR 155 ARG 156 GLY 157 THR 158 LYS 182 ASN 183 GLY 184 ILE 185 LYS 186 ALA 187 ASN 188 PHE 189 THR 190 VAL 191 ARG 192 HIS 193 ASN 194 VAL 195 GLU 196 ASP 197 GLY 198 SER 199 VAL 200 GLN 201 LEU 202 ALA 203 ASP 204 HIS 205 TYR 206 GLN 207 GLN 208 ASN 209 THR 210 PRO 211 ILE 212 GLY 213 ASP 214 GLY 215 PRO 216 VAL 217 LEU 218 LEU 219 PRO 220 ASP 221 ASN 222 HIS 223 TYR 224 LEU 225 SER 226 TYR 227 GLN 228 THR 229 VAL 230 LEU 231 SER 232 LYS 233 ASP 234 PRO 235 ASN 236 GLU 237 LYS 238 ARG 239 ASP 240 HIS 241 MET 242 VAL 243 LEU 244 LEU 245 GLU 246 PHE 247 VAL 248 THR 249 ALA 250 ALA 251 GLY 252 ILE 253 THR 254 LEU 255
Unit 5	LYS 3 GLY 4 GLU 5 GLU 6 LEU 7 PHE 8 THR 9 GLY 10 VAL 11 VAL 12 PRO 13 ILE 14 LEU 15 VAL 16 GLU 17 LEU 18 ASP 19 GLY 20 ASP 21 VAL 22 ASN 23 GLY 24 HIS 25 LYS 26 PHE 27 SER 28 VAL 29 ARG 30 GLY 31 GLU 32 GLY 33 GLU 34 GLY 35 ASP 36 ALA 37 THR 38 ILE 39 GLY 40 LYS 41 LEU 42 THR 43 LEU 44 LYS 45 PHE 46 ILE 47 CYS 48 THR 49 THR 50 GLY 51 LYS 52 LEU 53 PRO 54 VAL 55 PRO 56 TRP 57 PRO 58 THR 59 LEU 60 VAL 61 THR 62 THR 63 LEU 64 CRO 66 LEU 68 GLN 69 CYS 70 PHE 71 ALA 72 ARG 73 TYR 74 PRO 75 ASP 76 HIS 77 MET 78 LYS 79 GLN 80 HIS 81 ASP 82 PHE 83 PHE 84 LYS 85 SER 86 ALA 87 MET 88 PRO 89 GLU 90 GLY 91 TYR 92 VAL 93 GLN 94 GLU 95 ARG 96 THR 97 ILE 98 SER 99 PHE 100 LYS 101 ASP 102 ASP 103 GLY 104 LYS 105 TYR 106 LYS 107 THR 108 ARG 109 ALA 110 VAL 111 VAL 112 LYS 113 PHE 114 GLU 115 GLY 116 ASP 117 THR 118 LEU 119 VAL 120 ASN 121 ARG 122 ILE 123 GLU 124 LEU 125 LYS 126 GLY 127 THR 128 ASP 129 PHE 130 LYS 131 GLU 132 ASP 133 GLY 134 ASN 135 ILE 136 LEU 137 GLY 138 HIS 139 LYS 140 LEU 141 GLU 142 TYR 143 ASN 144 PHE 145 ASN 146 SER 147 HIS 148 ASN 149 VAL 150 TYR 151 ILE 152 THR 153 ALA 154 THR 155 ARG 156 GLY 184 ILE 185 LYS 186 ALA 187 ASN 188 PHE 189 THR 190 VAL 191 ARG 192 HIS 193 ASN 194 VAL 195 GLU 196 ASP 197 GLY 198 SER 199 VAL 200 GLN 201 LEU 202 ALA 203 ASP 204 HIS 205 TYR 206 GLN 207 GLN 208 ASN 209 THR 210 PRO 211 ILE 212 GLY 213 ASP 214 GLY 215 PRO 216 VAL 217 LEU 218 LEU 219 PRO 220 ASP 221 ASN 222 HIS 223 TYR 224 LEU 225 SER 226 TYR 227 GLN 228 THR 229 VAL 230 LEU 231 SER 232 LYS 233 ASP 234 PRO 235 ASN 236 GLU 237 LYS 238 HIS 241 MET 242 VAL 243 LEU 244 LEU 245 GLU 246 PHE 247 VAL 248 THR 249 ALA 250 ALA 251 GLY 252 ILE 253 THR 254 LEU 255