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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE CHARGE-TRANSFER INTERMEDIATE OF THE TRANSME REDOX CATALYST DSBB
Keywords MEMBRANE PROTEIN COMPLEX, MECHANISM OF DISULFIDE BOND FORMAT OXIDATIVE PROTEIN FOLDING IN ESCHERICHIA COLI PERIPLASM, X- CRYSTAL STRUCTURE, CHARGE TRANSFER REACTION INTERMEDIATE, F BUNDLE, PERIPLASM, REDOX-ACTIVE CENTER, CELL INNER MEMBRANE MEMBRANE, CHAPERONE, ELECTRON TRANSPORT, MEMBRANE, OXIDORED TRANSMEMBRANE, TRANSPORT
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3E9J     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   THIOL/DISULFIDE OXIDOREDUCTASE DSBA  B 188 1477 0
2  Protein   THIOL/DISULFIDE OXIDOREDUCTASE DSBB  C 134 1079 0
3  Protein   THIOL/DISULFIDE OXIDOREDUCTASE DSBA  E 188 1477 0
4  Protein   THIOL/DISULFIDE OXIDOREDUCTASE DSBB  F 134 1079 0
5  Ligand   THIOL/DISULFIDE OXIDOREDUCTASE DSBB  C 1 0 18
6  Ligand   THIOL/DISULFIDE OXIDOREDUCTASE DSBB  F 1 0 18
total       646 5112 36

Proteins
Unit 1 ALA1 GLN2 TYR3 GLU4 ASP5 GLY6 LYS7 GLN8 TYR9 THR10 THR11 LEU12 GLU13 LYS14 PRO15 VAL16 ALA17 GLY18 ALA19 PRO20 GLN21 VAL22 LEU23 GLU24 PHE25 PHE26 SER27 PHE28 PHE29 CYS30 PRO31 HIS32 ALA33 TYR34 GLN35 PHE36 GLU37 GLU38 VAL39 LEU40 HIS41 ILE42 SER43 ASP44 ASN45 VAL46 LYS47 LYS48 LYS49 LEU50 PRO51 GLU52 GLY53 VAL54 LYS55 MET56 THR57 LYS58 TYR59 HIS60 VAL61 ASN62 PHE63 MET64 GLY65 GLY66 ASP67 LEU68 GLY69 LYS70 ASP71 LEU72 THR73 GLN74 ALA75 TRP76 ALA77 VAL78 ALA79 MET80 ALA81 LEU82 GLY83 VAL84 GLU85 ASP86 LYS87 VAL88 THR89 VAL90 PRO91 LEU92 PHE93 GLU94 GLY95 VAL96 GLN97 LYS98 THR99 GLN100 THR101 ILE102 ARG103 SER104 ALA105 SER106 ASP107 ILE108 ARG109 ASP110 VAL111 PHE112 ILE113 ASN114 ALA115 GLY116 ILE117 LYS118 GLY119 GLU120 GLU121 TYR122 ASP123 ALA124 ALA125 TRP126 ASN127 SER128 PHE129 VAL130 VAL131 LYS132 SER133 LEU134 VAL135 ALA136 GLN137 GLN138 GLU139 LYS140 ALA141 ALA142 ALA143 ASP144 VAL145 GLN146 LEU147 ARG148 GLY149 VAL150 PRO151 ALA152 MET153 PHE154 VAL155 ASN156 GLY157 LYS158 TYR159 GLN160 LEU161 ASN162 PRO163 GLN164 GLY165 MET166 ASP167 THR168 SER169 ASN170 MET171 ASP172 VAL173 PHE174 VAL175 GLN176 GLN177 TYR178 ALA179 ASP180 THR181 VAL182 LYS183 TYR184 LEU185 SER186 GLU187 LYS188
Unit 2 ALA14 TRP15 LEU16 LEU17 MET18 ALA19 PHE20 THR21 ALA22 LEU23 ALA24 LEU25 GLU26 LEU27 THR28 ALA29 LEU30 TRP31 PHE32 GLN33 HIS34 VAL35 MET36 LEU37 LEU38 LYS39 PRO40 CYS41 VAL42 LEU43 CYS44 ILE45 TYR46 GLU47 ARG48 VAL49 ALA50 LEU51 PHE52 GLY53 VAL54 LEU55 GLY56 ALA57 ALA58 LEU59 ILE60 GLY61 ALA62 ILE63 ALA64 PRO65 LYS66 THR67 PRO68 LEU69 ARG70 TYR71 VAL72 ALA73 MET74 VAL75 ILE76 TRP77 LEU78 TYR79 SER80 ALA81 PHE82 ARG83 GLY84 VAL85 GLN86 LEU87 THR88 TYR89 GLU90 HIS91 THR92 MET93 LEU94 GLN95 LEU96 TYR97 PRO98 SER99 PRO100 PHE101 ALA102 THR103 CYS104 ASP105 PHE106 MET107 VAL108 ARG109 PHE110 PRO111 GLU112 TRP113 LEU114 PRO115 LEU116 ASP117 LYS118 TRP119 VAL120 PRO121 GLN122 VAL123 PHE124 VAL125 ALA126 MET142 PRO143 GLN144 TRP145 LEU146 LEU147 GLY148 ILE149 PHE150 ILE151 ALA152 TYR153 LEU154 ILE155 VAL156 ALA157 VAL158 LEU159 VAL160 VAL161 ILE162
Unit 3 ALA1 GLN2 TYR3 GLU4 ASP5 GLY6 LYS7 GLN8 TYR9 THR10 THR11 LEU12 GLU13 LYS14 PRO15 VAL16 ALA17 GLY18 ALA19 PRO20 GLN21 VAL22 LEU23 GLU24 PHE25 PHE26 SER27 PHE28 PHE29 CYS30 PRO31 HIS32 ALA33 TYR34 GLN35 PHE36 GLU37 GLU38 VAL39 LEU40 HIS41 ILE42 SER43 ASP44 ASN45 VAL46 LYS47 LYS48 LYS49 LEU50 PRO51 GLU52 GLY53 VAL54 LYS55 MET56 THR57 LYS58 TYR59 HIS60 VAL61 ASN62 PHE63 MET64 GLY65 GLY66 ASP67 LEU68 GLY69 LYS70 ASP71 LEU72 THR73 GLN74 ALA75 TRP76 ALA77 VAL78 ALA79 MET80 ALA81 LEU82 GLY83 VAL84 GLU85 ASP86 LYS87 VAL88 THR89 VAL90 PRO91 LEU92 PHE93 GLU94 GLY95 VAL96 GLN97 LYS98 THR99 GLN100 THR101 ILE102 ARG103 SER104 ALA105 SER106 ASP107 ILE108 ARG109 ASP110 VAL111 PHE112 ILE113 ASN114 ALA115 GLY116 ILE117 LYS118 GLY119 GLU120 GLU121 TYR122 ASP123 ALA124 ALA125 TRP126 ASN127 SER128 PHE129 VAL130 VAL131 LYS132 SER133 LEU134 VAL135 ALA136 GLN137 GLN138 GLU139 LYS140 ALA141 ALA142 ALA143 ASP144 VAL145 GLN146 LEU147 ARG148 GLY149 VAL150 PRO151 ALA152 MET153 PHE154 VAL155 ASN156 GLY157 LYS158 TYR159 GLN160 LEU161 ASN162 PRO163 GLN164 GLY165 MET166 ASP167 THR168 SER169 ASN170 MET171 ASP172 VAL173 PHE174 VAL175 GLN176 GLN177 TYR178 ALA179 ASP180 THR181 VAL182 LYS183 TYR184 LEU185 SER186 GLU187 LYS188
Unit 4 ALA14 TRP15 LEU16 LEU17 MET18 ALA19 PHE20 THR21 ALA22 LEU23 ALA24 LEU25 GLU26 LEU27 THR28 ALA29 LEU30 TRP31 PHE32 GLN33 HIS34 VAL35 MET36 LEU37 LEU38 LYS39 PRO40 CYS41 VAL42 LEU43 CYS44 ILE45 TYR46 GLU47 ARG48 VAL49 ALA50 LEU51 PHE52 GLY53 VAL54 LEU55 GLY56 ALA57 ALA58 LEU59 ILE60 GLY61 ALA62 ILE63 ALA64 PRO65 LYS66 THR67 PRO68 LEU69 ARG70 TYR71 VAL72 ALA73 MET74 VAL75 ILE76 TRP77 LEU78 TYR79 SER80 ALA81 PHE82 ARG83 GLY84 VAL85 GLN86 LEU87 THR88 TYR89 GLU90 HIS91 THR92 MET93 LEU94 GLN95 LEU96 TYR97 PRO98 SER99 PRO100 PHE101 ALA102 THR103 CYS104 ASP105 PHE106 MET107 VAL108 ARG109 PHE110 PRO111 GLU112 TRP113 LEU114 PRO115 LEU116 ASP117 LYS118 TRP119 VAL120 PRO121 GLN122 VAL123 PHE124 VAL125 ALA126 MET142 PRO143 GLN144 TRP145 LEU146 LEU147 GLY148 ILE149 PHE150 ILE151 ALA152 TYR153 LEU154 ILE155 VAL156 ALA157 VAL158 LEU159 VAL160 VAL161 ILE162

Ligands
Unit 5 UQ1501
Unit 6 UQ1501

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany