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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A PHOSPHOFRUCTOKINASE FROM PYROCOCCUS H OT3 WITH AMP
Keywords 6-PHOSPHOFRUCTOKINASE, PYROCOCCUS HORIKOSHII, AMP, ADP, GLYC KINASE, MAGNESIUM, METAL-BINDING, TRANSFERASE, STRUCTURAL G PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STR GENOMICS, MCSG
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3DRW     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ADP-SPECIFIC PHOSPHOFRUCTOKINASE  A 460 3724 0
2  Protein   ADP-SPECIFIC PHOSPHOFRUCTOKINASE  B 450 3655 0
3  Ligand   ADP-SPECIFIC PHOSPHOFRUCTOKINASE  A 3 0 25
4  Ligand   ADP-SPECIFIC PHOSPHOFRUCTOKINASE  B 1 0 23
5 Water     576 0 576
total       1490 7379 624

Proteins
Unit 1 SER-10 GLY-9 ARG-8 GLU-7 ASN-6 LEU-5 TYR-4 PHE-3 GLN-2 GLY-1 MET1 ILE2 PRO3 GLU4 HIS5 LEU6 SER7 ILE8 TYR9 THR10 ALA11 TYR12 ASN13 ALA14 ASN15 ILE16 ALA17 ALA18 ILE19 VAL20 LYS21 LEU22 ASN23 GLN24 GLU25 THR26 ILE27 GLN28 ASN29 LEU30 ILE31 ASN32 ALA33 PHE34 ASP35 PRO36 ASP37 GLU38 VAL39 LYS40 ARG41 ARG42 ILE43 GLU44 GLU45 TYR46 PRO47 ARG48 GLU49 ILE50 ASN51 GLU52 PRO53 ILE54 ASP55 PHE56 VAL57 ALA58 ARG59 LEU60 VAL61 HIS62 THR63 LEU64 LYS65 LEU66 GLY67 LYS68 PRO69 ALA70 ALA71 VAL72 PRO73 LEU74 VAL75 ASN76 GLU77 LYS78 MET79 ASN80 GLU81 TRP82 PHE83 ASP84 LYS85 THR86 PHE87 ARG88 TYR89 GLU90 GLU91 GLU92 ARG93 LEU94 GLY95 GLY96 GLN97 ALA98 GLY99 ILE100 ILE101 ALA102 ASN103 THR104 LEU105 ALA106 GLY107 LEU108 LYS109 ILE110 ARG111 LYS112 VAL113 ILE114 ALA115 TYR116 THR117 PRO118 PHE119 LEU120 PRO121 LYS122 ARG123 LEU124 ALA125 GLU126 LEU127 PHE128 LYS129 LYS130 GLY131 VAL132 LEU133 TYR134 PRO135 VAL136 VAL137 GLU138 ASN139 GLY140 GLU141 LEU142 GLN143 PHE144 LYS145 PRO146 ILE147 GLN148 GLU149 ALA150 TYR151 ARG152 GLU153 GLY154 ASP155 PRO156 LEU157 LYS158 ILE159 ASN160 ARG161 ILE162 PHE163 GLU164 PHE165 ARG166 LYS167 GLY168 LEU169 LYS170 PHE171 LYS172 LEU173 GLY174 ASP175 GLU176 THR177 ILE178 GLU179 ILE180 PRO181 ASN182 SER183 GLY184 ARG185 PHE186 ILE187 VAL188 SER189 ALA190 ARG191 PHE192 GLU193 SER194 ILE195 SER196 ARG197 ILE198 GLU199 THR200 ARG201 GLU202 ASP203 ILE204 LYS205 PRO206 PHE207 LEU208 GLY209 GLU210 ILE211 GLY212 LYS213 GLU214 VAL215 ASP216 GLY217 ALA218 ILE219 PHE220 SER221 GLY222 TYR223 GLN224 GLY225 LEU226 ARG227 THR228 LYS229 TYR230 SER231 ASP232 GLY233 LYS234 ASP235 ALA236 ASN237 TYR238 TYR239 LEU240 ARG241 ARG242 ALA243 LYS244 GLU245 ASP246 ILE247 ILE248 GLU249 PHE250 LYS251 GLU252 LYS253 ASP254 VAL255 LYS256 ILE257 HIS258 VAL259 GLU260 PHE261 ALA262 SER263 VAL264 GLN265 ASP266 ARG267 LYS268 LEU269 ARG270 LYS271 LYS272 ILE273 ILE274 THR275 ASN276 ILE277 LEU278 PRO279 PHE280 VAL281 ASP282 SER283 VAL284 GLY285 ILE286 ASP287 GLU288 ALA289 GLU290 ILE291 ALA292 GLN293 ILE294 LEU295 SER296 VAL297 LEU298 GLY299 TYR300 ARG301 GLU302 LEU303 ALA304 ASP305 ARG306 ILE307 PHE308 THR309 TYR310 ASN311 ARG312 LEU313 GLU314 ASP315 SER316 ILE317 LEU318 GLY319 GLY320 MET321 ILE322 ILE323 LEU324 ASP325 GLU326 LEU327 ASN328 PHE329 GLU330 ILE331 LEU332 GLN333 VAL334 HIS335 THR336 THR337 TYR338 TYR339 LEU340 MET341 TYR342 ILE343 THR344 HIS345 ARG346 ASP347 ASN348 PRO349 LEU350 SER351 GLU352 GLU353 GLU354 LEU355 ALA356 LYS357 SER358 LEU359 GLU360 PHE361 GLY362 THR363 THR364 LEU365 ALA366 ALA367 ALA368 ARG369 ALA370 SER371 LEU372 GLY373 ASP374 ILE375 ARG376 GLY377 PRO378 ASP379 ASP380 TYR381 LYS382 VAL383 GLY384 LEU385 LYS386 VAL387 PRO388 PHE389 ASN390 GLU391 ARG392 SER393 GLU394 TYR395 VAL396 LYS397 LEU398 ARG399 PHE400 GLU401 GLU402 ALA403 LYS404 SER405 ARG406 LEU407 ARG408 MET409 ARG410 GLU411 TYR412 LYS413 VAL414 VAL415 VAL416 ILE417 PRO418 THR419 ARG420 LEU421 VAL422 GLN423 ASN424 PRO425 VAL426 LEU427 THR428 VAL429 GLY430 LEU431 GLY432 ASP433 THR434 ILE435 SER436 ALA437 GLY438 ALA439 PHE440 LEU441 THR442 TYR443 LEU444 GLU445 PHE446 LEU447 LYS448 ARG449 HIS450
Unit 2 MET1 ILE2 PRO3 GLU4 HIS5 LEU6 SER7 ILE8 TYR9 THR10 ALA11 TYR12 ASN13 ALA14 ASN15 ILE16 ALA17 ALA18 ILE19 VAL20 LYS21 LEU22 ASN23 GLN24 GLU25 THR26 ILE27 GLN28 ASN29 LEU30 ILE31 ASN32 ALA33 PHE34 ASP35 PRO36 ASP37 GLU38 VAL39 LYS40 ARG41 ARG42 ILE43 GLU44 GLU45 TYR46 PRO47 ARG48 GLU49 ILE50 ASN51 GLU52 PRO53 ILE54 ASP55 PHE56 VAL57 ALA58 ARG59 LEU60 VAL61 HIS62 THR63 LEU64 LYS65 LEU66 GLY67 LYS68 PRO69 ALA70 ALA71 VAL72 PRO73 LEU74 VAL75 ASN76 GLU77 LYS78 MET79 ASN80 GLU81 TRP82 PHE83 ASP84 LYS85 THR86 PHE87 ARG88 TYR89 GLU90 GLU91 GLU92 ARG93 LEU94 GLY95 GLY96 GLN97 ALA98 GLY99 ILE100 ILE101 ALA102 ASN103 THR104 LEU105 ALA106 GLY107 LEU108 LYS109 ILE110 ARG111 LYS112 VAL113 ILE114 ALA115 TYR116 THR117 PRO118 PHE119 LEU120 PRO121 LYS122 ARG123 LEU124 ALA125 GLU126 LEU127 PHE128 LYS129 LYS130 GLY131 VAL132 LEU133 TYR134 PRO135 VAL136 VAL137 GLU138 ASN139 GLY140 GLU141 LEU142 GLN143 PHE144 LYS145 PRO146 ILE147 GLN148 GLU149 ALA150 TYR151 ARG152 GLU153 GLY154 ASP155 PRO156 LEU157 LYS158 ILE159 ASN160 ARG161 ILE162 PHE163 GLU164 PHE165 ARG166 LYS167 GLY168 LEU169 LYS170 PHE171 LYS172 LEU173 GLY174 ASP175 GLU176 THR177 ILE178 GLU179 ILE180 PRO181 ASN182 SER183 GLY184 ARG185 PHE186 ILE187 VAL188 SER189 ALA190 ARG191 PHE192 GLU193 SER194 ILE195 SER196 ARG197 ILE198 GLU199 THR200 ARG201 GLU202 ASP203 ILE204 LYS205 PRO206 PHE207 LEU208 GLY209 GLU210 ILE211 GLY212 LYS213 GLU214 VAL215 ASP216 GLY217 ALA218 ILE219 PHE220 SER221 GLY222 TYR223 GLN224 GLY225 LEU226 ARG227 THR228 LYS229 TYR230 SER231 ASP232 GLY233 LYS234 ASP235 ALA236 ASN237 TYR238 TYR239 LEU240 ARG241 ARG242 ALA243 LYS244 GLU245 ASP246 ILE247 ILE248 GLU249 PHE250 LYS251 GLU252 LYS253 ASP254 VAL255 LYS256 ILE257 HIS258 VAL259 GLU260 PHE261 ALA262 SER263 VAL264 GLN265 ASP266 ARG267 LYS268 LEU269 ARG270 LYS271 LYS272 ILE273 ILE274 THR275 ASN276 ILE277 LEU278 PRO279 PHE280 VAL281 ASP282 SER283 VAL284 GLY285 ILE286 ASP287 GLU288 ALA289 GLU290 ILE291 ALA292 GLN293 ILE294 LEU295 SER296 VAL297 LEU298 GLY299 TYR300 ARG301 GLU302 LEU303 ALA304 ASP305 ARG306 ILE307 PHE308 THR309 TYR310 ASN311 ARG312 LEU313 GLU314 ASP315 SER316 ILE317 LEU318 GLY319 GLY320 MET321 ILE322 ILE323 LEU324 ASP325 GLU326 LEU327 ASN328 PHE329 GLU330 ILE331 LEU332 GLN333 VAL334 HIS335 THR336 THR337 TYR338 TYR339 LEU340 MET341 TYR342 ILE343 THR344 HIS345 ARG346 ASP347 ASN348 PRO349 LEU350 SER351 GLU352 GLU353 GLU354 LEU355 ALA356 LYS357 SER358 LEU359 GLU360 PHE361 GLY362 THR363 THR364 LEU365 ALA366 ALA367 ALA368 ARG369 ALA370 SER371 LEU372 GLY373 ASP374 ILE375 ARG376 GLY377 PRO378 ASP379 ASP380 TYR381 LYS382 VAL383 GLY384 LEU385 LYS386 VAL387 PRO388 PHE389 ASN390 GLU391 ARG392 SER393 GLU394 TYR395 VAL396 LYS397 LEU398 ARG399 PHE400 GLU401 GLU402 ALA403 LYS404 SER405 ARG406 LEU407 ARG408 MET409 ARG410 GLU411 TYR412 LYS413 VAL414 VAL415 VAL416 ILE417 PRO418 THR419 ARG420 LEU421 VAL422 GLN423 ASN424 PRO425 VAL426 LEU427 THR428 VAL429 GLY430 LEU431 GLY432 ASP433 THR434 ILE435 SER436 ALA437 GLY438 ALA439 PHE440 LEU441 THR442 TYR443 LEU444 GLU445 PHE446 LEU447 LYS448 ARG449 HIS450

Ligands
Unit 3 AMP1484 NA1485 NA1486
Unit 4 AMP1485

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany