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Sequence, Chains, Asymmetric and Biological Units

Title GDP-PEROSAMINE SYNTHASE K186A MUTANT FROM CAULOBACTER CRESCE BOUND SUGAR LIGAND
Keywords PEROSAMINE, DEOXYSUGAR, PYRIDOXAL PHOSPHATE, ASPARTATE AMINOTRANSFERASE, O-ANTIGEN, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3DR4     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PUTATIVE PEROSAMINE SYNTHETASE  A 364 2792 0
2  Protein   PUTATIVE PEROSAMINE SYNTHETASE  B 366 2811 0
3  Protein   PUTATIVE PEROSAMINE SYNTHETASE  C 368 2826 0
4  Protein   PUTATIVE PEROSAMINE SYNTHETASE  D 367 2818 0
5  Ligand   PUTATIVE PEROSAMINE SYNTHETASE  A 1 0 53
6  Ligand   PUTATIVE PEROSAMINE SYNTHETASE  B 3 0 61
7  Ligand   PUTATIVE PEROSAMINE SYNTHETASE  C 1 0 53
8  Ligand   PUTATIVE PEROSAMINE SYNTHETASE  D 1 0 53
9 Water     1259 0 1259
total       2730 11247 1479
Proteins
Unit 1 SER8 VAL9 ALA10 ALA11 PRO12 ARG13 LEU14 ASP15 GLY16 ASN17 GLU18 ARG19 ASP20 TYR21 VAL22 LEU23 GLU24 CYS25 MET26 ASP27 THR28 THR29 TRP30 ILE31 SER32 SER33 VAL34 GLY35 ARG36 PHE37 ILE38 VAL39 GLU40 PHE41 GLU42 LYS43 ALA44 PHE45 ALA46 ASP47 TYR48 CYS49 GLY50 VAL51 LYS52 HIS53 ALA54 ILE55 ALA56 CYS57 ASN58 ASN59 GLY60 THR61 THR62 ALA63 LEU64 HIS65 LEU66 ALA67 LEU68 VAL69 ALA70 MET71 GLY72 ILE73 GLY74 PRO75 GLY76 ASP77 GLU78 VAL79 ILE80 VAL81 PRO82 SER83 LEU84 THR85 TYR86 ILE87 ALA88 SER89 ALA90 ASN91 SER92 VAL93 THR94 TYR95 CYS96 GLY97 ALA98 THR99 PRO100 VAL101 LEU102 VAL103 ASP104 ASN105 ASP106 PRO107 ARG108 THR109 PHE110 ASN111 LEU112 ASP113 ALA114 ALA115 LYS116 LEU117 GLU118 ALA119 LEU120 ILE121 THR122 PRO123 ARG124 THR125 LYS126 ALA127 ILE128 MET129 PRO130 VAL131 HIS132 LEU133 TYR134 GLY135 GLN136 ILE137 CYS138 ASP139 MET140 ASP141 PRO142 ILE143 LEU144 GLU145 VAL146 ALA147 ARG148 ARG149 HIS150 ASN151 LEU152 LEU153 VAL154 ILE155 GLU156 ASP157 ALA158 ALA159 GLU160 ALA161 VAL162 GLY163 ALA164 THR165 TYR166 ARG167 GLY168 LYS169 LYS170 SER171 GLY172 SER173 LEU174 GLY175 ASP176 CYS177 ALA178 THR179 PHE180 SER181 PHE182 PHE183 GLY184 ASN185 ALA186 ILE187 ILE188 THR189 THR190 GLY191 GLU192 GLY193 GLY194 MET195 ILE196 THR197 THR198 ASN199 ASP200 ASP201 ASP202 LEU203 ALA204 ALA205 LYS206 MET207 ARG208 LEU209 LEU210 ARG211 GLY212 GLN213 GLY214 MET215 ASP216 PRO217 ASN218 ARG219 ARG220 TYR221 TRP222 PHE223 PRO224 ILE225 VAL226 GLY227 PHE228 ASN229 TYR230 ARG231 MET232 THR233 ASN234 ILE235 GLN236 ALA237 ALA238 ILE239 GLY240 LEU241 ALA242 GLN243 LEU244 GLU245 ARG246 VAL247 ASP248 GLU249 HIS250 LEU251 ALA252 ALA253 ARG254 GLU255 ARG256 VAL257 VAL258 GLY259 TRP260 TYR261 GLU262 GLN263 LYS264 LEU265 ALA266 ARG267 LEU268 GLY269 ASN270 ARG271 VAL272 THR273 LYS274 PRO275 HIS276 VAL277 ALA278 LEU279 THR280 GLY281 ARG282 HIS283 VAL284 PHE285 TRP286 MET287 TYR288 THR289 VAL290 ARG291 LEU292 GLY293 GLU294 GLY295 LEU296 SER297 THR298 THR299 ARG300 ASP301 GLN302 VAL303 ILE304 LYS305 ASP306 LEU307 ASP308 ALA309 LEU310 GLY311 ILE312 GLU313 SER314 ARG315 PRO316 VAL317 PHE318 HIS319 PRO320 MET321 HIS322 ILE323 MET324 PRO325 PRO326 TYR327 ALA328 HIS329 LEU330 ALA331 THR332 ASP333 ASP334 LEU335 LYS336 ILE337 ALA338 GLU339 ALA340 CYS341 GLY342 VAL343 ASP344 GLY345 LEU346 ASN347 LEU348 PRO349 THR350 HIS351 ALA352 GLY353 LEU354 THR355 GLU356 ALA357 ASP358 ILE359 ASP360 ARG361 VAL362 ILE363 ALA364 ALA365 LEU366 ASP367 GLN368 VAL369 LEU370 VAL371
Unit 2 ARG6 ILE7 SER8 VAL9 ALA10 ALA11 PRO12 ARG13 LEU14 ASP15 GLY16 ASN17 GLU18 ARG19 ASP20 TYR21 VAL22 LEU23 GLU24 CYS25 MET26 ASP27 THR28 THR29 TRP30 ILE31 SER32 SER33 VAL34 GLY35 ARG36 PHE37 ILE38 VAL39 GLU40 PHE41 GLU42 LYS43 ALA44 PHE45 ALA46 ASP47 TYR48 CYS49 GLY50 VAL51 LYS52 HIS53 ALA54 ILE55 ALA56 CYS57 ASN58 ASN59 GLY60 THR61 THR62 ALA63 LEU64 HIS65 LEU66 ALA67 LEU68 VAL69 ALA70 MET71 GLY72 ILE73 GLY74 PRO75 GLY76 ASP77 GLU78 VAL79 ILE80 VAL81 PRO82 SER83 LEU84 THR85 TYR86 ILE87 ALA88 SER89 ALA90 ASN91 SER92 VAL93 THR94 TYR95 CYS96 GLY97 ALA98 THR99 PRO100 VAL101 LEU102 VAL103 ASP104 ASN105 ASP106 PRO107 ARG108 THR109 PHE110 ASN111 LEU112 ASP113 ALA114 ALA115 LYS116 LEU117 GLU118 ALA119 LEU120 ILE121 THR122 PRO123 ARG124 THR125 LYS126 ALA127 ILE128 MET129 PRO130 VAL131 HIS132 LEU133 TYR134 GLY135 GLN136 ILE137 CYS138 ASP139 MET140 ASP141 PRO142 ILE143 LEU144 GLU145 VAL146 ALA147 ARG148 ARG149 HIS150 ASN151 LEU152 LEU153 VAL154 ILE155 GLU156 ASP157 ALA158 ALA159 GLU160 ALA161 VAL162 GLY163 ALA164 THR165 TYR166 ARG167 GLY168 LYS169 LYS170 SER171 GLY172 SER173 LEU174 GLY175 ASP176 CYS177 ALA178 THR179 PHE180 SER181 PHE182 PHE183 GLY184 ASN185 ALA186 ILE187 ILE188 THR189 THR190 GLY191 GLU192 GLY193 GLY194 MET195 ILE196 THR197 THR198 ASN199 ASP200 ASP201 ASP202 LEU203 ALA204 ALA205 LYS206 MET207 ARG208 LEU209 LEU210 ARG211 GLY212 GLN213 GLY214 MET215 ASP216 PRO217 ASN218 ARG219 ARG220 TYR221 TRP222 PHE223 PRO224 ILE225 VAL226 GLY227 PHE228 ASN229 TYR230 ARG231 MET232 THR233 ASN234 ILE235 GLN236 ALA237 ALA238 ILE239 GLY240 LEU241 ALA242 GLN243 LEU244 GLU245 ARG246 VAL247 ASP248 GLU249 HIS250 LEU251 ALA252 ALA253 ARG254 GLU255 ARG256 VAL257 VAL258 GLY259 TRP260 TYR261 GLU262 GLN263 LYS264 LEU265 ALA266 ARG267 LEU268 GLY269 ASN270 ARG271 VAL272 THR273 LYS274 PRO275 HIS276 VAL277 ALA278 LEU279 THR280 GLY281 ARG282 HIS283 VAL284 PHE285 TRP286 MET287 TYR288 THR289 VAL290 ARG291 LEU292 GLY293 GLU294 GLY295 LEU296 SER297 THR298 THR299 ARG300 ASP301 GLN302 VAL303 ILE304 LYS305 ASP306 LEU307 ASP308 ALA309 LEU310 GLY311 ILE312 GLU313 SER314 ARG315 PRO316 VAL317 PHE318 HIS319 PRO320 MET321 HIS322 ILE323 MET324 PRO325 PRO326 TYR327 ALA328 HIS329 LEU330 ALA331 THR332 ASP333 ASP334 LEU335 LYS336 ILE337 ALA338 GLU339 ALA340 CYS341 GLY342 VAL343 ASP344 GLY345 LEU346 ASN347 LEU348 PRO349 THR350 HIS351 ALA352 GLY353 LEU354 THR355 GLU356 ALA357 ASP358 ILE359 ASP360 ARG361 VAL362 ILE363 ALA364 ALA365 LEU366 ASP367 GLN368 VAL369 LEU370 VAL371
Unit 3 LEU4 PRO5 ARG6 ILE7 SER8 VAL9 ALA10 ALA11 PRO12 ARG13 LEU14 ASP15 GLY16 ASN17 GLU18 ARG19 ASP20 TYR21 VAL22 LEU23 GLU24 CYS25 MET26 ASP27 THR28 THR29 TRP30 ILE31 SER32 SER33 VAL34 GLY35 ARG36 PHE37 ILE38 VAL39 GLU40 PHE41 GLU42 LYS43 ALA44 PHE45 ALA46 ASP47 TYR48 CYS49 GLY50 VAL51 LYS52 HIS53 ALA54 ILE55 ALA56 CYS57 ASN58 ASN59 GLY60 THR61 THR62 ALA63 LEU64 HIS65 LEU66 ALA67 LEU68 VAL69 ALA70 MET71 GLY72 ILE73 GLY74 PRO75 GLY76 ASP77 GLU78 VAL79 ILE80 VAL81 PRO82 SER83 LEU84 THR85 TYR86 ILE87 ALA88 SER89 ALA90 ASN91 SER92 VAL93 THR94 TYR95 CYS96 GLY97 ALA98 THR99 PRO100 VAL101 LEU102 VAL103 ASP104 ASN105 ASP106 PRO107 ARG108 THR109 PHE110 ASN111 LEU112 ASP113 ALA114 ALA115 LYS116 LEU117 GLU118 ALA119 LEU120 ILE121 THR122 PRO123 ARG124 THR125 LYS126 ALA127 ILE128 MET129 PRO130 VAL131 HIS132 LEU133 TYR134 GLY135 GLN136 ILE137 CYS138 ASP139 MET140 ASP141 PRO142 ILE143 LEU144 GLU145 VAL146 ALA147 ARG148 ARG149 HIS150 ASN151 LEU152 LEU153 VAL154 ILE155 GLU156 ASP157 ALA158 ALA159 GLU160 ALA161 VAL162 GLY163 ALA164 THR165 TYR166 ARG167 GLY168 LYS169 LYS170 SER171 GLY172 SER173 LEU174 GLY175 ASP176 CYS177 ALA178 THR179 PHE180 SER181 PHE182 PHE183 GLY184 ASN185 ALA186 ILE187 ILE188 THR189 THR190 GLY191 GLU192 GLY193 GLY194 MET195 ILE196 THR197 THR198 ASN199 ASP200 ASP201 ASP202 LEU203 ALA204 ALA205 LYS206 MET207 ARG208 LEU209 LEU210 ARG211 GLY212 GLN213 GLY214 MET215 ASP216 PRO217 ASN218 ARG219 ARG220 TYR221 TRP222 PHE223 PRO224 ILE225 VAL226 GLY227 PHE228 ASN229 TYR230 ARG231 MET232 THR233 ASN234 ILE235 GLN236 ALA237 ALA238 ILE239 GLY240 LEU241 ALA242 GLN243 LEU244 GLU245 ARG246 VAL247 ASP248 GLU249 HIS250 LEU251 ALA252 ALA253 ARG254 GLU255 ARG256 VAL257 VAL258 GLY259 TRP260 TYR261 GLU262 GLN263 LYS264 LEU265 ALA266 ARG267 LEU268 GLY269 ASN270 ARG271 VAL272 THR273 LYS274 PRO275 HIS276 VAL277 ALA278 LEU279 THR280 GLY281 ARG282 HIS283 VAL284 PHE285 TRP286 MET287 TYR288 THR289 VAL290 ARG291 LEU292 GLY293 GLU294 GLY295 LEU296 SER297 THR298 THR299 ARG300 ASP301 GLN302 VAL303 ILE304 LYS305 ASP306 LEU307 ASP308 ALA309 LEU310 GLY311 ILE312 GLU313 SER314 ARG315 PRO316 VAL317 PHE318 HIS319 PRO320 MET321 HIS322 ILE323 MET324 PRO325 PRO326 TYR327 ALA328 HIS329 LEU330 ALA331 THR332 ASP333 ASP334 LEU335 LYS336 ILE337 ALA338 GLU339 ALA340 CYS341 GLY342 VAL343 ASP344 GLY345 LEU346 ASN347 LEU348 PRO349 THR350 HIS351 ALA352 GLY353 LEU354 THR355 GLU356 ALA357 ASP358 ILE359 ASP360 ARG361 VAL362 ILE363 ALA364 ALA365 LEU366 ASP367 GLN368 VAL369 LEU370 VAL371
Unit 4 PRO5 ARG6 ILE7 SER8 VAL9 ALA10 ALA11 PRO12 ARG13 LEU14 ASP15 GLY16 ASN17 GLU18 ARG19 ASP20 TYR21 VAL22 LEU23 GLU24 CYS25 MET26 ASP27 THR28 THR29 TRP30 ILE31 SER32 SER33 VAL34 GLY35 ARG36 PHE37 ILE38 VAL39 GLU40 PHE41 GLU42 LYS43 ALA44 PHE45 ALA46 ASP47 TYR48 CYS49 GLY50 VAL51 LYS52 HIS53 ALA54 ILE55 ALA56 CYS57 ASN58 ASN59 GLY60 THR61 THR62 ALA63 LEU64 HIS65 LEU66 ALA67 LEU68 VAL69 ALA70 MET71 GLY72 ILE73 GLY74 PRO75 GLY76 ASP77 GLU78 VAL79 ILE80 VAL81 PRO82 SER83 LEU84 THR85 TYR86 ILE87 ALA88 SER89 ALA90 ASN91 SER92 VAL93 THR94 TYR95 CYS96 GLY97 ALA98 THR99 PRO100 VAL101 LEU102 VAL103 ASP104 ASN105 ASP106 PRO107 ARG108 THR109 PHE110 ASN111 LEU112 ASP113 ALA114 ALA115 LYS116 LEU117 GLU118 ALA119 LEU120 ILE121 THR122 PRO123 ARG124 THR125 LYS126 ALA127 ILE128 MET129 PRO130 VAL131 HIS132 LEU133 TYR134 GLY135 GLN136 ILE137 CYS138 ASP139 MET140 ASP141 PRO142 ILE143 LEU144 GLU145 VAL146 ALA147 ARG148 ARG149 HIS150 ASN151 LEU152 LEU153 VAL154 ILE155 GLU156 ASP157 ALA158 ALA159 GLU160 ALA161 VAL162 GLY163 ALA164 THR165 TYR166 ARG167 GLY168 LYS169 LYS170 SER171 GLY172 SER173 LEU174 GLY175 ASP176 CYS177 ALA178 THR179 PHE180 SER181 PHE182 PHE183 GLY184 ASN185 ALA186 ILE187 ILE188 THR189 THR190 GLY191 GLU192 GLY193 GLY194 MET195 ILE196 THR197 THR198 ASN199 ASP200 ASP201 ASP202 LEU203 ALA204 ALA205 LYS206 MET207 ARG208 LEU209 LEU210 ARG211 GLY212 GLN213 GLY214 MET215 ASP216 PRO217 ASN218 ARG219 ARG220 TYR221 TRP222 PHE223 PRO224 ILE225 VAL226 GLY227 PHE228 ASN229 TYR230 ARG231 MET232 THR233 ASN234 ILE235 GLN236 ALA237 ALA238 ILE239 GLY240 LEU241 ALA242 GLN243 LEU244 GLU245 ARG246 VAL247 ASP248 GLU249 HIS250 LEU251 ALA252 ALA253 ARG254 GLU255 ARG256 VAL257 VAL258 GLY259 TRP260 TYR261 GLU262 GLN263 LYS264 LEU265 ALA266 ARG267 LEU268 GLY269 ASN270 ARG271 VAL272 THR273 LYS274 PRO275 HIS276 VAL277 ALA278 LEU279 THR280 GLY281 ARG282 HIS283 VAL284 PHE285 TRP286 MET287 TYR288 THR289 VAL290 ARG291 LEU292 GLY293 GLU294 GLY295 LEU296 SER297 THR298 THR299 ARG300 ASP301 GLN302 VAL303 ILE304 LYS305 ASP306 LEU307 ASP308 ALA309 LEU310 GLY311 ILE312 GLU313 SER314 ARG315 PRO316 VAL317 PHE318 HIS319 PRO320 MET321 HIS322 ILE323 MET324 PRO325 PRO326 TYR327 ALA328 HIS329 LEU330 ALA331 THR332 ASP333 ASP334 LEU335 LYS336 ILE337 ALA338 GLU339 ALA340 CYS341 GLY342 VAL343 ASP344 GLY345 LEU346 ASN347 LEU348 PRO349 THR350 HIS351 ALA352 GLY353 LEU354 THR355 GLU356 ALA357 ASP358 ILE359 ASP360 ARG361 VAL362 ILE363 ALA364 ALA365 LEU366 ASP367 GLN368 VAL369 LEU370 VAL371
Ligands
Unit 5 G4M500
Unit 6 G4M500 EDO1260 EDO1261
Unit 7 G4M500
Unit 8 G4M500
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany