3DPR - Sequence, Chains, Asymmetric and Biological Units

• Title: HUMAN RHINOVIRUS 2 BOUND TO A CONCATAMER OF THE VLDL RECEPTO V3
• Keywords: HUMAN RHINOVIRUS, VLDL-RECEPTOR, VIRUS-PROTEIN COMPLEX, ICOS VIRUS, ATP-BINDING, CAPSID PROTEIN, COVALENT PROTEIN-RNA LI CYTOPLASMIC VESICLE, HELICASE, HOST-VIRUS INTERACTION, HYDR LIPOPROTEIN, MEMBRANE, MYRISTATE, NUCLEOTIDE-BINDING, NUCLEOTIDYLTRANSFERASE, PHOSPHOPROTEIN, PROTEASE, RNA REPLI RNA-BINDING, RNA-DIRECTED RNA POLYMERASE, THIOL PROTEASE, TRANSFERASE, VIRION, CHOLESTEROL METABOLISM, COATED PIT, EG DOMAIN, ENDOCYTOSIS, GLYCOPROTEIN, LIPID METABOLISM, LIPID TRANSPORT, RECEPTOR, STEROID METABOLISM, TRANSMEMBRANE, TRA VLDL, VIRUS
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3DPR	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PROTEIN VP1	A	269	2155	0
2	Protein	PROTEIN VP2	B	250	1960	0
3	Protein	PROTEIN VP3	C	237	1833	0
4	Protein	PROTEIN VP4	D	25	194	0
5	Protein	LDL-RECEPTOR CLASS A 3	E	39	293	0
6	Ligand	PROTEIN VP1	A	1	0	14
7	Ligand	LDL-RECEPTOR CLASS A 3	E	1	0	1
total				822	6435	15

Proteins

Unit 1	LEU 15 VAL 16 VAL 17 PRO 18 ASN 19 ILE 20 ASN 21 SER 22 SER 23 ASN 24 PRO 25 THR 26 THR 27 SER 28 ASN 29 SER 30 ALA 31 PRO 32 ALA 33 LEU 34 ASP 35 ALA 36 ALA 37 GLU 38 THR 39 GLY 40 HIS 41 THR 42 SER 43 SER 44 VAL 45 GLN 46 PRO 47 GLU 48 ASP 49 VAL 50 ILE 51 GLU 52 THR 53 ARG 54 TYR 55 VAL 56 GLN 57 THR 58 SER 59 GLN 60 THR 61 ARG 62 ASP 63 GLU 64 MET 65 SER 66 LEU 67 GLU 68 SER 69 PHE 70 LEU 71 GLY 72 ARG 73 SER 74 GLY 75 CYS 76 ILE 77 HIS 78 GLU 79 SER 80 LYS 81 LEU 82 GLU 83 VAL 84 THR 85 LEU 86 ALA 87 ASN 88 TYR 89 ASN 90 LYS 91 GLU 92 ASN 93 PHE 94 THR 95 VAL 96 TRP 97 ALA 98 ILE 99 ASN 100 LEU 101 GLN 102 GLU 103 MET 104 ALA 105 GLN 106 ILE 107 ARG 108 ARG 109 LYS 110 PHE 111 GLU 112 LEU 113 PHE 114 THR 115 TYR 116 THR 117 ARG 118 PHE 119 ASP 120 SER 121 GLU 122 ILE 123 THR 124 LEU 125 VAL 126 PRO 127 CYS 128 ILE 129 SER 130 ALA 131 LEU 132 SER 133 GLN 134 ASP 135 ILE 136 GLY 137 HIS 138 ILE 139 THR 140 MET 141 GLN 142 TYR 143 MET 144 TYR 145 VAL 146 PRO 147 PRO 148 GLY 149 ALA 150 PRO 151 VAL 152 PRO 153 ASN 154 SER 155 ARG 156 ASP 157 ASP 158 TYR 159 ALA 160 TRP 161 GLN 162 SER 163 GLY 164 THR 165 ASN 166 ALA 167 SER 168 VAL 169 PHE 170 TRP 171 GLN 172 HIS 173 GLY 174 GLN 175 ALA 176 TYR 177 PRO 178 ARG 179 PHE 180 SER 181 LEU 182 PRO 183 PHE 184 LEU 185 SER 186 VAL 187 ALA 188 SER 189 ALA 190 TYR 191 TYR 192 MET 193 PHE 194 TYR 195 ASP 196 GLY 197 TYR 198 ASP 199 GLU 200 GLN 201 ASP 202 GLN 203 ASN 204 TYR 205 GLY 206 THR 207 ALA 208 ASN 209 THR 210 ASN 211 ASN 212 MET 213 GLY 214 SER 215 LEU 216 CYS 217 SER 218 ARG 219 ILE 220 VAL 221 THR 222 GLU 223 LYS 224 HIS 225 ILE 226 HIS 227 LYS 228 VAL 229 HIS 230 ILE 231 MET 232 THR 233 ARG 234 ILE 235 TYR 236 HIS 237 LYS 238 ALA 239 LYS 240 HIS 241 VAL 242 LYS 243 ALA 244 TRP 245 CYS 246 PRO 247 ARG 248 PRO 249 PRO 250 ARG 251 ALA 252 LEU 253 GLU 254 TYR 255 THR 256 ARG 257 ALA 258 HIS 259 ARG 260 THR 261 ASN 262 PHE 263 LYS 264 ILE 265 GLU 266 ASP 267 ARG 268 SER 269 ILE 270 GLN 271 THR 272 ALA 273 ILE 274 VAL 275 THR 276 ARG 277 PRO 278 ILE 279 ILE 280 THR 281 THR 282 ALA 283
Unit 2	ARG 12 ILE 13 ILE 14 GLN 15 ILE 16 THR 17 ARG 18 GLY 19 ASP 20 SER 21 THR 22 ILE 23 THR 24 SER 25 GLN 26 ASP 27 VAL 28 ALA 29 ASN 30 ALA 31 ILE 32 VAL 33 ALA 34 TYR 35 GLY 36 VAL 37 TRP 38 PRO 39 HIS 40 TYR 41 LEU 42 SER 43 SER 44 LYS 45 ASP 46 ALA 47 SER 48 ALA 49 ILE 50 ASP 51 LYS 52 PRO 53 SER 54 GLN 55 PRO 56 ASP 57 THR 58 SER 59 SER 60 ASN 61 ARG 62 PHE 63 TYR 64 THR 65 LEU 66 ARG 67 SER 68 VAL 69 THR 70 TRP 71 SER 72 SER 73 SER 74 SER 75 LYS 76 GLY 77 TRP 78 TRP 79 TRP 80 LYS 81 LEU 82 PRO 83 ASP 84 ALA 85 LEU 86 LYS 87 ASP 88 MET 89 GLY 90 ILE 91 PHE 92 GLY 93 GLU 94 ASN 95 MET 96 PHE 97 TYR 98 HIS 99 TYR 100 LEU 101 GLY 102 ARG 103 SER 104 GLY 105 TYR 106 THR 107 ILE 108 HIS 109 VAL 110 GLN 111 CYS 112 ASN 113 ALA 114 SER 115 LYS 116 PHE 117 HIS 118 GLN 119 GLY 120 THR 121 LEU 122 ILE 123 VAL 124 ALA 125 LEU 126 ILE 127 PRO 128 GLU 129 HIS 130 GLN 131 ILE 132 ALA 133 SER 134 ALA 135 LEU 136 HIS 137 GLY 138 ASN 139 VAL 140 ASN 141 VAL 142 GLY 143 TYR 144 ASN 145 TYR 146 THR 147 HIS 148 PRO 149 GLY 150 GLU 151 THR 152 GLY 153 ARG 154 GLU 155 VAL 156 LYS 157 ALA 158 GLU 159 THR 160 ARG 161 LEU 162 ASN 163 PRO 164 ASP 165 LEU 166 GLN 167 PRO 168 THR 169 GLU 170 GLU 171 TYR 172 TRP 173 LEU 174 ASN 175 PHE 176 ASP 177 GLY 178 THR 179 LEU 180 LEU 181 GLY 182 ASN 183 ILE 184 THR 185 ILE 186 PHE 187 PRO 188 HIS 189 GLN 190 PHE 191 ILE 192 ASN 193 LEU 194 ARG 195 SER 196 ASN 197 ASN 198 SER 199 ALA 200 THR 201 ILE 202 ILE 203 ALA 204 PRO 205 TYR 206 VAL 207 ASN 208 ALA 209 VAL 210 PRO 211 MET 212 ASP 213 SER 214 MET 215 ARG 216 SER 217 HIS 218 ASN 219 ASN 220 TRP 221 SER 222 LEU 223 VAL 224 ILE 225 ILE 226 PRO 227 ILE 228 CYS 229 PRO 230 LEU 231 GLU 232 THR 233 SER 234 SER 235 ALA 236 ILE 237 ASN 238 THR 239 ILE 240 PRO 241 ILE 242 THR 243 ILE 244 SER 245 ILE 246 SER 247 PRO 248 MET 249 CYS 250 ALA 251 GLU 252 PHE 253 SER 254 GLY 255 ALA 256 ARG 257 ALA 258 LYS 259 ARG 260 GLN 261
Unit 3	GLY 1 LEU 2 PRO 3 VAL 4 PHE 5 ILE 6 THR 7 PRO 8 GLY 9 SER 10 GLY 11 GLN 12 PHE 13 LEU 14 THR 15 THR 16 ASP 17 ASP 18 PHE 19 GLN 20 SER 21 PRO 22 CYS 23 ALA 24 LEU 25 PRO 26 TRP 27 TYR 28 HIS 29 PRO 30 THR 31 LYS 32 GLU 33 ILE 34 SER 35 ILE 36 PRO 37 GLY 38 GLU 39 VAL 40 LYS 41 ASN 42 LEU 43 VAL 44 GLU 45 ILE 46 CYS 47 GLN 48 VAL 49 ASP 50 SER 51 LEU 52 VAL 53 PRO 54 ILE 55 ASN 56 ASN 57 THR 58 ASP 59 THR 60 TYR 61 ILE 62 ASN 63 SER 64 GLU 65 ASN 66 MET 67 TYR 68 SER 69 VAL 70 VAL 71 LEU 72 GLN 73 SER 74 SER 75 ILE 76 ASN 77 ALA 78 PRO 79 ASP 80 LYS 81 ILE 82 PHE 83 SER 84 ILE 85 ARG 86 THR 87 ASP 88 VAL 89 ALA 90 SER 91 GLN 92 PRO 93 LEU 94 ALA 95 THR 96 THR 97 LEU 98 ILE 99 GLY 100 GLU 101 ILE 102 SER 103 SER 104 TYR 105 PHE 106 THR 107 HIS 108 TRP 109 THR 110 GLY 111 SER 112 LEU 113 ARG 114 PHE 115 SER 116 PHE 117 MET 118 PHE 119 CYS 120 GLY 121 THR 122 ALA 123 ASN 124 THR 125 THR 126 VAL 127 LYS 128 LEU 129 LEU 130 LEU 131 ALA 132 TYR 133 THR 134 PRO 135 PRO 136 GLY 137 ILE 138 ALA 139 GLU 140 PRO 141 THR 142 THR 143 ARG 144 LYS 145 ASP 146 ALA 147 MET 148 LEU 149 GLY 150 THR 151 HIS 152 VAL 153 ILE 154 TRP 155 ASP 156 VAL 157 GLY 158 LEU 159 GLN 160 SER 161 THR 162 ILE 163 SER 164 MET 165 VAL 166 VAL 167 PRO 168 TRP 169 ILE 170 SER 171 ALA 172 SER 173 HIS 174 TYR 175 ARG 176 ASN 177 THR 178 SER 179 PRO 180 GLY 181 ARG 182 SER 183 THR 184 SER 185 GLY 186 TYR 187 ILE 188 THR 189 CYS 190 TRP 191 TYR 192 GLN 193 THR 194 ARG 195 LEU 196 VAL 197 ILE 198 PRO 199 PRO 200 GLN 201 THR 202 PRO 203 PRO 204 THR 205 ALA 206 ARG 207 LEU 208 LEU 209 CYS 210 PHE 211 VAL 212 SER 213 GLY 214 CYS 215 LYS 216 ASP 217 PHE 218 CYS 219 LEU 220 ARG 221 MET 222 ALA 223 ARG 224 ASP 225 THR 226 ASN 227 LEU 228 HIS 229 LEU 230 GLN 231 SER 232 GLY 233 ALA 234 ILE 235 ALA 236 GLN 237
Unit 4	ALA 2 GLN 3 VAL 4 SER 5 ARG 6 GLN 7 ASN 25 TYR 26 PHE 27 ASN 28 ILE 29 ASN 30 TYR 31 PHE 32 LYS 33 ASP 34 ALA 35 ALA 36 SER 37 ASN 38 GLY 39 ALA 40 SER 41 LYS 42 LEU 43
Unit 5	CYS 3 ARG 4 ILE 5 HIS 6 GLU 7 ILE 8 SER 9 CYS 10 GLY 11 ALA 12 HIS 13 SER 14 THR 15 GLN 16 CYS 17 ILE 18 PRO 19 VAL 20 SER 21 TRP 22 ARG 23 CYS 24 ASP 25 GLY 26 GLU 27 ASN 28 ASP 29 CYS 30 ASP 31 SER 32 GLY 33 GLU 34 ASP 35 GLU 36 GLU 37 ASN 38 CYS 39 GLY 40 ASN 41

Ligands

Unit 6	DAO 290
Unit 7	CA 50