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Title | CRYSTAL STRUCTURE OF PLP BOUND 7,8-DIAMINOPELARGONIC ACID SY BACILLUS SUBTILIS | |
Keywords | AMINOTRANSFERASE, BIOTIN BIOSYNTHESIS, PYRIDOXAL PHOSPHATE, ADENOSYL-L-METHIONINE, TRANSFERASE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3DOD | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | A | 417 | 3281 | 0 | |
2 | Protein | B | 416 | 3271 | 0 | |
3 | Ligand | A | 1 | 0 | 15 | |
4 | Ligand | B | 1 | 0 | 15 | |
5 | Water | 384 | 0 | 384 | ||
total | 1219 | 6552 | 414 |
Unit 1 | HIS3 ASP4 LEU5 ILE6 GLU7 LYS8 SER9 LYS10 LYS11 HIS12 LEU13 TRP14 LEU15 PRO16 PHE17 THR18 GLN19 MET20 LYS21 ASP22 TYR23 ASP24 GLU25 ASN26 PRO27 LEU28 ILE29 ILE30 GLU31 SER32 GLY33 THR34 GLY35 ILE36 LYS37 VAL38 LYS39 ASP40 ILE41 ASN42 GLY43 LYS44 GLU45 TYR46 TYR47 ASP48 GLY49 PHE50 SER51 SER52 VAL53 TRP54 LEU55 ASN56 VAL57 HIS58 GLY59 HIS60 ARG61 LYS62 LYS63 GLU64 LEU65 ASP66 ASP67 ALA68 ILE69 LYS70 LYS71 GLN72 LEU73 GLY74 LYS75 ILE76 ALA77 HIS78 SER79 THR80 LEU81 LEU82 GLY83 MET84 THR85 ASN86 VAL87 PRO88 ALA89 THR90 GLN91 LEU92 ALA93 GLU94 THR95 LEU96 ILE97 ASP98 ILE99 SER100 PRO101 LYS102 LYS103 LEU104 THR105 ARG106 VAL107 PHE108 TYR109 SER110 ASP111 SER112 GLY113 ALA114 GLU115 ALA116 MET117 GLU118 ILE119 ALA120 LEU121 LYS122 MET123 ALA124 PHE125 GLN126 TYR127 TRP128 LYS129 ASN130 ILE131 GLY132 LYS133 PRO134 GLU135 LYS136 GLN137 LYS138 PHE139 ILE140 ALA141 MET142 LYS143 SER173 TYR174 LYS175 ALA176 PRO177 ILE178 PRO179 TYR180 VAL181 TYR182 ARG183 SER184 GLU185 SER186 GLY187 ASP188 PRO189 ASP190 GLU191 CYS192 ARG193 ASP194 GLN195 CYS196 LEU197 ARG198 GLU199 LEU200 ALA201 GLN202 LEU203 LEU204 GLU205 GLU206 HIS207 HIS208 GLU209 GLU210 ILE211 ALA212 ALA213 LEU214 SER215 ILE216 GLU217 SER218 MET219 VAL220 GLN221 GLY222 ALA223 SER224 GLY225 MET226 ILE227 VAL228 MET229 PRO230 GLU231 GLY232 TYR233 LEU234 ALA235 GLY236 VAL237 ARG238 GLU239 LEU240 CYS241 THR242 THR243 TYR244 ASP245 VAL246 LEU247 MET248 ILE249 VAL250 ASP251 GLU252 VAL253 ALA254 THR255 GLY256 PHE257 GLY258 ARG259 THR260 GLY261 LYS262 MET263 PHE264 ALA265 CYS266 GLU267 HIS268 GLU269 ASN270 VAL271 GLN272 PRO273 ASP274 LEU275 MET276 ALA277 ALA278 GLY279 LYS280 GLY281 ILE282 THR283 GLY284 GLY285 TYR286 LEU287 PRO288 ILE289 ALA290 VAL291 THR292 PHE293 ALA294 THR295 GLU296 ASP297 ILE298 TYR299 LYS300 ALA301 PHE302 TYR303 ASP304 ASP305 TYR306 GLU307 ASN308 LEU309 LYS310 THR311 PHE312 PHE313 HIS314 GLY315 HIS316 SER317 TYR318 THR319 GLY320 ASN321 GLN322 LEU323 GLY324 CYS325 ALA326 VAL327 ALA328 LEU329 GLU330 ASN331 LEU332 ALA333 LEU334 PHE335 GLU336 SER337 GLU338 ASN339 ILE340 VAL341 GLU342 GLN343 VAL344 ALA345 GLU346 LYS347 SER348 LYS349 LYS350 LEU351 HIS352 PHE353 LEU354 LEU355 GLN356 ASP357 LEU358 HIS359 ALA360 LEU361 PRO362 HIS363 VAL364 GLY365 ASP366 ILE367 ARG368 GLN369 LEU370 GLY371 PHE372 MET373 CYS374 GLY375 ALA376 GLU377 LEU378 VAL379 ARG380 SER381 LYS382 GLU383 THR384 LYS385 GLU386 PRO387 TYR388 PRO389 ALA390 ASP391 ARG392 ARG393 ILE394 GLY395 TYR396 LYS397 VAL398 SER399 LEU400 LYS401 MET402 ARG403 GLU404 LEU405 GLY406 MET407 LEU408 THR409 ARG410 PRO411 LEU412 GLY413 ASP414 VAL415 ILE416 ALA417 PHE418 LEU419 PRO420 PRO421 LEU422 ALA423 SER424 THR425 ALA426 GLU427 GLU428 LEU429 SER430 GLU431 MET432 VAL433 ALA434 ILE435 MET436 LYS437 GLN438 ALA439 ILE440 HIS441 GLU442 VAL443 THR444 SER445 LEU446 GLU447 ASP448 |
Unit 2 | ASP4 LEU5 ILE6 GLU7 LYS8 SER9 LYS10 LYS11 HIS12 LEU13 TRP14 LEU15 PRO16 PHE17 THR18 GLN19 MET20 LYS21 ASP22 TYR23 ASP24 GLU25 ASN26 PRO27 LEU28 ILE29 ILE30 GLU31 SER32 GLY33 THR34 GLY35 ILE36 LYS37 VAL38 LYS39 ASP40 ILE41 ASN42 GLY43 LYS44 GLU45 TYR46 TYR47 ASP48 GLY49 PHE50 SER51 SER52 VAL53 TRP54 LEU55 ASN56 VAL57 HIS58 GLY59 HIS60 ARG61 LYS62 LYS63 GLU64 LEU65 ASP66 ASP67 ALA68 ILE69 LYS70 LYS71 GLN72 LEU73 GLY74 LYS75 ILE76 ALA77 HIS78 SER79 THR80 LEU81 LEU82 GLY83 MET84 THR85 ASN86 VAL87 PRO88 ALA89 THR90 GLN91 LEU92 ALA93 GLU94 THR95 LEU96 ILE97 ASP98 ILE99 SER100 PRO101 LYS102 LYS103 LEU104 THR105 ARG106 VAL107 PHE108 TYR109 SER110 ASP111 SER112 GLY113 ALA114 GLU115 ALA116 MET117 GLU118 ILE119 ALA120 LEU121 LYS122 MET123 ALA124 PHE125 GLN126 TYR127 TRP128 LYS129 ASN130 ILE131 GLY132 LYS133 PRO134 GLU135 LYS136 GLN137 LYS138 PHE139 ILE140 ALA141 MET142 LYS143 SER173 TYR174 LYS175 ALA176 PRO177 ILE178 PRO179 TYR180 VAL181 TYR182 ARG183 SER184 GLU185 SER186 GLY187 ASP188 PRO189 ASP190 GLU191 CYS192 ARG193 ASP194 GLN195 CYS196 LEU197 ARG198 GLU199 LEU200 ALA201 GLN202 LEU203 LEU204 GLU205 GLU206 HIS207 HIS208 GLU209 GLU210 ILE211 ALA212 ALA213 LEU214 SER215 ILE216 GLU217 SER218 MET219 VAL220 GLN221 GLY222 ALA223 SER224 GLY225 MET226 ILE227 VAL228 MET229 PRO230 GLU231 GLY232 TYR233 LEU234 ALA235 GLY236 VAL237 ARG238 GLU239 LEU240 CYS241 THR242 THR243 TYR244 ASP245 VAL246 LEU247 MET248 ILE249 VAL250 ASP251 GLU252 VAL253 ALA254 THR255 GLY256 PHE257 GLY258 ARG259 THR260 GLY261 LYS262 MET263 PHE264 ALA265 CYS266 GLU267 HIS268 GLU269 ASN270 VAL271 GLN272 PRO273 ASP274 LEU275 MET276 ALA277 ALA278 GLY279 LYS280 GLY281 ILE282 THR283 GLY284 GLY285 TYR286 LEU287 PRO288 ILE289 ALA290 VAL291 THR292 PHE293 ALA294 THR295 GLU296 ASP297 ILE298 TYR299 LYS300 ALA301 PHE302 TYR303 ASP304 ASP305 TYR306 GLU307 ASN308 LEU309 LYS310 THR311 PHE312 PHE313 HIS314 GLY315 HIS316 SER317 TYR318 THR319 GLY320 ASN321 GLN322 LEU323 GLY324 CYS325 ALA326 VAL327 ALA328 LEU329 GLU330 ASN331 LEU332 ALA333 LEU334 PHE335 GLU336 SER337 GLU338 ASN339 ILE340 VAL341 GLU342 GLN343 VAL344 ALA345 GLU346 LYS347 SER348 LYS349 LYS350 LEU351 HIS352 PHE353 LEU354 LEU355 GLN356 ASP357 LEU358 HIS359 ALA360 LEU361 PRO362 HIS363 VAL364 GLY365 ASP366 ILE367 ARG368 GLN369 LEU370 GLY371 PHE372 MET373 CYS374 GLY375 ALA376 GLU377 LEU378 VAL379 ARG380 SER381 LYS382 GLU383 THR384 LYS385 GLU386 PRO387 TYR388 PRO389 ALA390 ASP391 ARG392 ARG393 ILE394 GLY395 TYR396 LYS397 VAL398 SER399 LEU400 LYS401 MET402 ARG403 GLU404 LEU405 GLY406 MET407 LEU408 THR409 ARG410 PRO411 LEU412 GLY413 ASP414 VAL415 ILE416 ALA417 PHE418 LEU419 PRO420 PRO421 LEU422 ALA423 SER424 THR425 ALA426 GLU427 GLU428 LEU429 SER430 GLU431 MET432 VAL433 ALA434 ILE435 MET436 LYS437 GLN438 ALA439 ILE440 HIS441 GLU442 VAL443 THR444 SER445 LEU446 GLU447 ASP448 |
Unit 3 | PLP501 |
Unit 4 | PLP502 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |