3DNF - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF (E)-4-HYDROXY-3-METHYL-BUT-2-ENYL DIPHOSPHATE R THE TERMINAL ENZYME OF THE NON-MEVALONATE PATHWAY
• Keywords: TRILOBAL STRUCURE, OPEN ALPHA/BETA, IRON, IRON-SULFUR, ISOPR BIOSYNTHESIS, METAL-BINDING, NADP, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3DNF	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein		A	281	2203	0
2	Protein		B	282	2209	0
3	Ligand		A	2	0	13
4	Ligand		B	2	0	13
5	Water			561	0	561
total				1128	4412	587

Proteins

Unit 1

MET 1 VAL 2 ASP 3 ILE 4 ILE 5 ILE 6 ALA 7 GLU 8 HIS 9 ALA 10 GLY 11 PHE 12 CYS 13 PHE 14 GLY 15 VAL 16 LYS 17 ARG 18 ALA 19 VAL 20 LYS 21 LEU 22 ALA 23 GLU 24 GLU 25 SER 26 LEU 27 LYS 28 GLU 29 SER 30 GLN 31 GLY 32 LYS 33 VAL 34 TYR 35 THR 36 LEU 37 GLY 38 PRO 39 ILE 40 ILE 41 HIS 42 ASN 43 PRO 44 GLN 45 GLU 46 VAL 47 ASN 48 ARG 49 LEU 50 LYS 51 ASN 52 LEU 53 GLY 54 VAL 55 PHE 56 PRO 57 SER 58 GLN 59 GLY 60 GLU 61 GLU 62 PHE 63 LYS 64 GLU 65 GLY 66 ASP 67 THR 68 VAL 69 ILE 70 ILE 71 ARG 72 SER 73 HIS 74 GLY 75 ILE 76 PRO 77 PRO 78 GLU 79 LYS 80 GLU 81 GLU 82 ALA 83 LEU 84 ARG 85 LYS 86 LYS 87 GLY 88 LEU 89 LYS 90 VAL 91 ILE 92 ASP 93 ALA 94 THR 95 CYS 96 PRO 97 TYR 98 VAL 99 LYS 100 ALA 101 VAL 102 HIS 103 GLU 104 ALA 105 VAL 106 CYS 107 GLN 108 LEU 109 THR 110 ARG 111 GLU 112 GLY 113 TYR 114 PHE 115 VAL 116 VAL 117 LEU 118 VAL 119 GLY 120 GLU 121 LYS 122 ASN 123 HIS 124 PRO 125 GLU 126 VAL 127 ILE 128 GLY 129 THR 130 LEU 131 GLY 132 TYR 133 LEU 134 ARG 135 ALA 136 CYS 137 ASN 138 GLY 139 LYS 140 GLY 141 ILE 142 VAL 143 VAL 144 GLU 145 THR 146 LEU 147 GLU 148 ASP 149 ILE 150 GLY 151 GLU 152 ALA 153 LEU 154 LYS 155 HIS 156 GLU 157 ARG 158 VAL 159 GLY 160 ILE 161 VAL 162 ALA 163 GLN 164 THR 165 THR 166 GLN 167 ASN 168 GLU 169 GLU 170 PHE 171 PHE 172 LYS 173 GLU 174 VAL 175 VAL 176 GLY 177 GLU 178 ILE 179 ALA 180 LEU 181 TRP 182 VAL 183 LYS 184 GLU 185 VAL 186 LYS 187 VAL 188 ILE 189 ASN 190 THR 191 ILE 192 CYS 193 ASN 194 ALA 195 THR 196 SER 197 LEU 198 ARG 199 GLN 200 GLU 201 SER 202 VAL 203 LYS 204 LYS 205 LEU 206 ALA 207 PRO 208 GLU 209 VAL 210 ASP 211 VAL 212 MET 213 ILE 214 ILE 215 ILE 216 GLY 217 GLY 218 LYS 219 ASN 220 SER 221 GLY 222 ASN 223 THR 224 ARG 225 ARG 226 LEU 227 TYR 228 TYR 229 ILE 230 SER 231 LYS 232 GLU 233 LEU 234 ASN 235 PRO 236 ASN 237 THR 238 TYR 239 HIS 240 ILE 241 GLU 242 THR 243 ALA 244 GLU 245 GLU 246 LEU 247 GLN 248 PRO 249 GLU 250 TRP 251 PHE 252 ARG 253 GLY 254 VAL 255 LYS 256 ARG 257 VAL 258 GLY 259 ILE 260 SER 261 ALA 262 GLY 263 ALA 264 SER 265 THR 266 PRO 267 ASP 268 TRP 269 ILE 270 ILE 271 GLU 272 GLN 273 VAL 274 LYS 275 SER 276 ARG 277 ILE 278 GLN 279 GLU 280 ILE 281

Unit 2

MET 1 VAL 2 ASP 3 ILE 4 ILE 5 ILE 6 ALA 7 GLU 8 HIS 9 ALA 10 GLY 11 PHE 12 CYS 13 PHE 14 GLY 15 VAL 16 LYS 17 ARG 18 ALA 19 VAL 20 LYS 21 LEU 22 ALA 23 GLU 24 GLU 25 SER 26 LEU 27 LYS 28 GLU 29 SER 30 GLN 31 GLY 32 LYS 33 VAL 34 TYR 35 THR 36 LEU 37 GLY 38 PRO 39 ILE 40 ILE 41 HIS 42 ASN 43 PRO 44 GLN 45 GLU 46 VAL 47 ASN 48 ARG 49 LEU 50 LYS 51 ASN 52 LEU 53 GLY 54 VAL 55 PHE 56 PRO 57 SER 58 GLN 59 GLY 60 GLU 61 GLU 62 PHE 63 LYS 64 GLU 65 GLY 66 ASP 67 THR 68 VAL 69 ILE 70 ILE 71 ARG 72 SER 73 HIS 74 GLY 75 ILE 76 PRO 77 PRO 78 GLU 79 LYS 80 GLU 81 GLU 82 ALA 83 LEU 84 ARG 85 LYS 86 LYS 87 GLY 88 LEU 89 LYS 90 VAL 91 ILE 92 ASP 93 ALA 94 THR 95 CYS 96 PRO 97 TYR 98 VAL 99 LYS 100 ALA 101 VAL 102 HIS 103 GLU 104 ALA 105 VAL 106 CYS 107 GLN 108 LEU 109 THR 110 ARG 111 GLU 112 GLY 113 TYR 114 PHE 115 VAL 116 VAL 117 LEU 118 VAL 119 GLY 120 GLU 121 LYS 122 ASN 123 HIS 124 PRO 125 GLU 126 VAL 127 ILE 128 GLY 129 THR 130 LEU 131 GLY 132 TYR 133 LEU 134 ARG 135 ALA 136 CYS 137 ASN 138 GLY 139 LYS 140 GLY 141 ILE 142 VAL 143 VAL 144 GLU 145 THR 146 LEU 147 GLU 148 ASP 149 ILE 150 GLY 151 GLU 152 ALA 153 LEU 154 LYS 155 HIS 156 GLU 157 ARG 158 VAL 159 GLY 160 ILE 161 VAL 162 ALA 163 GLN 164 THR 165 THR 166 GLN 167 ASN 168 GLU 169 GLU 170 PHE 171 PHE 172 LYS 173 GLU 174 VAL 175 VAL 176 GLY 177 GLU 178 ILE 179 ALA 180 LEU 181 TRP 182 VAL 183 LYS 184 GLU 185 VAL 186 LYS 187 VAL 188 ILE 189 ASN 190 THR 191 ILE 192 CYS 193 ASN 194 ALA 195 THR 196 SER 197 LEU 198 ARG 199 GLN 200 GLU 201 SER 202 VAL 203 LYS 204 LYS 205 LEU 206 ALA 207 PRO 208 GLU 209 VAL 210 ASP 211 VAL 212 MET 213 ILE 214 ILE 215 ILE 216 GLY 217 GLY 218 LYS 219 ASN 220 SER 221 GLY 222 ASN 223 THR 224 ARG 225 ARG 226 LEU 227 TYR 228 TYR 229 ILE 230 SER 231 LYS 232 GLU 233 LEU 234 ASN 235 PRO 236 ASN 237 THR 238 TYR 239 HIS 240 ILE 241 GLU 242 THR 243 ALA 244 GLU 245 GLU 246 LEU 247 GLN 248 PRO 249 GLU 250 TRP 251 PHE 252 ARG 253 GLY 254 VAL 255 LYS 256 ARG 257 VAL 258 GLY 259 ILE 260 SER 261 ALA 262 GLY 263 ALA 264 SER 265 THR 266 PRO 267 ASP 268 TRP 269 ILE 270 ILE 271 GLU 272 GLN 273 VAL 274 LYS 275 SER 276 ARG 277 ILE 278 GLN 279 GLU 280 ILE 281 CYS 282

Ligands

Unit 3	F3S 2302 GOL 3731
Unit 4	F3S 3302 GOL 3732