3DKN - Sequence, Chains, Asymmetric and Biological Units

• Title: SEC61 IN THE CANINE RIBOSOME-CHANNEL COMPLEX FROM THE ENDOPL RETICULUM
• Keywords: RIBOSOME-CHANNEL COMPLEX, CO-TRANSLATIONAL TRANSLOCATION, EN RETICULUM, PROTEIN TRANSPORT-RNA COMPLEX
• Experiment: ELECTRON MICROSCOPY
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3DKN	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	RNA		D	20	428	0
2	RNA		E	17	371	0
3	RNA		F	32	683	0
4	Protein	PREPROTEIN TRANSLOCASE SUBUNIT SECYPREPROTEIN TRANSLOCASE SUBUNIT SECEPREPROTEIN TRANSLOCASE SUBUNIT SECG	A	430	3291	0
5	Protein	PREPROTEIN TRANSLOCASE SUBUNIT SECYPREPROTEIN TRANSLOCASE SUBUNIT SECEPREPROTEIN TRANSLOCASE SUBUNIT SECG	B	65	524	0
6	Protein	PREPROTEIN TRANSLOCASE SUBUNIT SECYPREPROTEIN TRANSLOCASE SUBUNIT SECEPREPROTEIN TRANSLOCASE SUBUNIT SECG	C	32	257	0
total				596	5554	0

Proteins

Unit 4	LYS 2 LYS 3 LEU 4 ILE 5 PRO 6 ILE 7 LEU 8 GLU 9 LYS 10 ILE 11 PRO 12 GLU 13 VAL 14 GLU 15 LEU 16 PRO 17 VAL 18 LYS 19 GLU 20 ILE 21 THR 22 PHE 23 LYS 24 GLU 25 LYS 26 LEU 27 LYS 28 TRP 29 THR 30 GLY 31 ILE 32 VAL 33 LEU 34 VAL 35 LEU 36 TYR 37 PHE 38 ILE 39 MET 40 GLY 41 CYS 42 ILE 43 ASP 44 VAL 45 TYR 46 THR 47 ALA 48 GLY 49 ALA 50 GLN 51 ILE 52 PRO 53 ALA 54 ILE 55 PHE 56 GLU 57 PHE 58 TRP 59 GLN 60 THR 61 ILE 62 THR 63 ALA 64 SER 65 ARG 66 ILE 67 GLY 68 THR 69 LEU 70 ILE 71 THR 72 LEU 73 GLY 74 ILE 75 GLY 76 PRO 77 ILE 78 VAL 79 THR 80 ALA 81 GLY 82 ILE 83 ILE 84 MET 85 GLN 86 LEU 87 LEU 88 VAL 89 GLY 90 SER 91 GLY 92 ILE 93 ILE 94 GLN 95 MET 96 ASP 97 LEU 98 SER 99 ILE 100 PRO 101 GLU 102 ASN 103 ARG 104 ALA 105 LEU 106 PHE 107 GLN 108 GLY 109 CYS 110 GLN 111 LYS 112 LEU 113 LEU 114 SER 115 ILE 116 ILE 117 MET 118 CYS 119 PHE 120 VAL 121 GLU 122 ALA 123 VAL 124 LEU 125 PHE 126 VAL 127 GLY 128 ALA 129 GLY 130 ALA 131 PHE 132 GLY 133 ILE 134 LEU 135 THR 136 PRO 137 LEU 138 LEU 139 ALA 140 PHE 141 LEU 142 VAL 143 ILE 144 ILE 145 GLN 146 ILE 147 ALA 148 PHE 149 GLY 150 SER 151 ILE 152 ILE 153 LEU 154 ILE 155 TYR 156 LEU 157 ASP 158 GLU 159 ILE 160 VAL 161 SER 162 LYS 163 TYR 164 GLY 165 ILE 166 GLY 167 SER 168 GLY 169 ILE 170 GLY 171 LEU 172 PHE 173 ILE 174 ALA 175 ALA 176 GLY 177 VAL 178 SER 179 GLN 180 THR 181 ILE 182 PHE 183 VAL 184 GLY 185 ALA 186 LEU 187 GLY 188 PRO 189 GLU 190 GLY 191 TYR 192 LEU 193 TRP 194 LYS 195 PHE 196 LEU 197 ASN 198 SER 199 LEU 200 ILE 201 GLN 202 GLY 203 VAL 204 PRO 205 ASN 206 ILE 207 GLU 208 TYR 209 ILE 210 ALA 211 PRO 212 ILE 213 ILE 214 GLY 215 THR 216 ILE 217 ILE 218 VAL 219 PHE 220 LEU 221 MET 222 VAL 223 VAL 224 TYR 225 ALA 226 GLU 227 CYS 228 MET 229 ARG 230 VAL 231 GLU 232 ILE 233 PRO 234 LEU 235 ALA 236 HIS 237 GLY 238 ARG 239 ILE 240 LYS 241 GLY 242 ALA 243 VAL 244 GLY 245 LYS 246 TYR 247 PRO 248 ILE 249 LYS 250 PHE 251 VAL 252 TYR 253 VAL 254 SER 255 ASN 256 ILE 257 PRO 258 VAL 259 ILE 260 LEU 261 ALA 262 ALA 263 ALA 264 LEU 265 PHE 266 ALA 267 ASN 268 ILE 269 GLN 270 LEU 271 TRP 272 GLY 273 LEU 274 ALA 275 LEU 276 TYR 277 ARG 278 MET 279 GLY 280 ILE 281 PRO 282 ILE 283 LEU 284 GLY 285 HIS 286 TYR 287 GLU 288 GLY 289 GLY 290 ARG 291 ALA 292 VAL 293 ASP 294 GLY 295 ILE 296 ALA 297 TYR 298 TYR 299 LEU 300 SER 301 THR 302 PRO 303 TYR 304 GLY 305 LEU 306 SER 307 SER 308 VAL 309 ILE 310 SER 311 ASP 312 PRO 313 ILE 314 HIS 315 ALA 316 ILE 317 VAL 318 TYR 319 MET 320 ILE 321 ALA 322 MET 323 ILE 324 ILE 325 THR 326 CYS 327 VAL 328 MET 329 PHE 330 GLY 331 ILE 332 PHE 333 TRP 334 VAL 335 GLU 336 THR 337 THR 338 GLY 339 LEU 340 ASP 341 PRO 342 LYS 343 SER 344 MET 345 ALA 346 LYS 347 ARG 348 ILE 349 GLY 350 SER 351 LEU 352 GLY 353 MET 354 ALA 355 ILE 356 LYS 357 GLY 358 PHE 359 ARG 360 LYS 361 SER 362 ALA 363 ILE 364 GLU 365 HIS 366 ARG 367 LEU 368 LYS 369 ARG 370 TYR 371 ILE 372 PRO 373 PRO 374 LEU 375 THR 376 VAL 377 MET 378 SER 379 SER 380 ALA 381 PHE 382 VAL 383 GLY 384 PHE 385 LEU 386 ALA 387 THR 388 ILE 389 ALA 390 ASN 391 PHE 392 ILE 393 GLY 394 ALA 395 LEU 396 GLY 397 GLY 398 GLY 399 THR 400 GLY 401 VAL 402 LEU 403 LEU 404 THR 405 VAL 406 SER 407 ILE 408 VAL 409 TYR 410 ARG 411 MET 412 TYR 413 GLU 414 GLN 415 LEU 416 LEU 417 ARG 418 GLU 419 LYS 420 VAL 421 SER 422 GLU 423 LEU 424 HIS 425 PRO 426 ALA 427 ILE 428 ALA 429 LYS 430 LEU 431
Unit 5	THR 2 ASP 3 PHE 4 ASN 5 GLN 6 LYS 7 ILE 8 GLU 9 GLN 10 LEU 11 LYS 12 GLU 13 PHE 14 ILE 15 GLU 16 GLU 17 CYS 18 ARG 19 ARG 20 VAL 21 TRP 22 LEU 23 VAL 24 LEU 25 LYS 26 LYS 27 PRO 28 THR 29 LYS 30 ASP 31 GLU 32 TYR 33 LEU 34 ALA 35 VAL 36 ALA 37 LYS 38 VAL 39 THR 40 ALA 41 LEU 42 GLY 43 ILE 44 SER 45 LEU 46 LEU 47 GLY 48 ILE 49 ILE 50 GLY 51 TYR 52 ILE 53 ILE 54 HIS 55 VAL 56 PRO 57 ALA 58 THR 59 TYR 60 ILE 61 LYS 62 GLY 63 ILE 64 LEU 65 LYS 66
Unit 6	GLU 21 THR 22 PHE 23 SER 24 LYS 25 ILE 26 ARG 27 VAL 28 LYS 29 PRO 30 GLU 31 HIS 32 VAL 33 ILE 34 GLY 35 VAL 36 THR 37 VAL 38 ALA 39 PHE 40 VAL 41 ILE 42 ILE 43 GLU 44 ALA 45 ILE 46 LEU 47 THR 48 TYR 49 GLY 50 ARG 51 PHE 52

Nucleic acids

Unit 1	C 53 G 54 U 55 G 56 C 57 C 58 A 59 A 60 G 61 C 62 U 63 G 64 C 65 G 66 A 67 U 68 A 69 A 70 G 71 C 72
Unit 2	A 80 G 81 C 82 C 83 G 84 C 85 A 86 C 87 G 88 G 89 A 90 G 91 G 92 C 93 G 94 A 95 A 96
Unit 3	G 1415 G 1416 G 1417 U 1418 U 1419 C 1420 C 1421 U 1422 C 1423 A 1424 G 1425 C 1426 A 1427 C 1428 U 1429 G 1430 C 1431 U 1432 G 1433 A 1434 U 1435 C 1436 A 1437 G 1438 C 1439 U 1440 G 1441 A 1442 G 1443 G 1444 G 1445 U 1446