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Sequence, Chains, Asymmetric and Biological Units

Title MAPPING METAL-BINDING SITES IN THE CATALYTIC DOMAIN OF BACTERIAL RNASE P RNA
Keywords CATALYTIC RNA, RNA PROCESSING, HYDROLASE, RNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3DHS     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 215 4613 0
2  Ligand   RNASE P RNA  A 15 0 15
total       230 4613 15

Nucleic acids
Unit 1 G1 U2 U3 A4 A5 U6 C7 A8 U9 G10 C11 U12 C13 G14 G15 G16 U17 A18 A19 U20 C21 G22 C23 U24 G25 C26 G27 G28 C29 C30 G31 G32 U33 U34 U35 C36 G37 G38 C39 C40 G41 U42 A43 G44 A45 G46 G47 A48 A49 A50 G51 U52 C53 C54 A55 U56 G57 C58 U59 C60 G61 C62 A63 C64 G65 G66 U67 G68 C69 U70 G71 A72 G73 A74 U75 G76 C77 C78 C79 G80 U81 G250 C251 G252 A253 G254 A255 A256 A257 C258 C259 C260 A261 A262 A263 A271 G272 G273 G274 G275 C276 A277 C278 C279 U280 U281 C282 C283 C284 G285 A286 A287 G288 G289 A290 A291 A292 U293 G294 A295 A296 C297 G298 G299 A300 G301 G302 G303 A304 A305 G306 G307 A308 C309 A310 G311 G312 C313 G314 G315 C316 G317 C318 A319 U320 G321 C322 A323 G324 C325 C326 U327 G328 U329 A330 G331 A332 U333 A334 G335 A336 U337 G338 A339 U340 U341 A342 C343 C344 G345 C346 C347 G348 G349 A350 G351 U376 A377 C378 G379 A380 A381 G382 G383 U384 A385 C386 A387 G388 A389 A390 C391 A392 U393 G394 G395 C396 U397 U398 A399 U400 A401 G402 A403 G404 C405 A406 U407 G408 A409 U410 U411 A412 A413 C414

Ligands
Unit 2 OS501 OS502 OS503 OS504 OS505 OS506 OS507 OS508 OS509 OS510 OS511 OS512 OS513 OS514 OS515

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany