3DEC - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF A GLYCOSYL HYDROLASES FAMILY 2 PROTEIN BACTEROIDES THETAIOTAOMICRON
• Keywords: GLUCOSYL HYDROLASE FAMILY 2, BETA-GALACTOSIDASE, NYSGXRC, PR STRUCTURE INITIATIVE II (PSI-II), JELLY-ROLL FOLD, IMMUNOGL LIKE FOLD, TIM-BARREL DOMAIN, STRUCTURAL GENOMICS, NEW YORK RESEARCH CENTER FOR STRUCTURAL GENOMICS, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3DEC	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	BETA-GALACTOSIDASE	A	983	7821	112
2	Ligand	BETA-GALACTOSIDASE	A	1	0	1
3	Water			98	0	98
total				1082	7821	211

Proteins

Unit 1

GLN 4 PRO 5 GLU 6 TRP 7 GLN 8 SER 9 GLN 10 TYR 11 ALA 12 VAL 13 GLY 14 LEU 15 ASN 16 LYS 17 LEU 18 ASP 19 PRO 20 HIS 21 THR 22 TYR 23 VAL 24 TRP 25 PRO 26 TYR 27 ALA 28 ASP 29 ALA 30 SER 31 GLU 32 VAL 33 GLU 34 LYS 35 GLY 36 THR 37 PHE 38 GLU 39 GLN 40 SER 41 PRO 42 TYR 43 TYR 44 MSE 45 SER 46 LEU 47 ASN 48 GLY 49 GLN 50 TRP 51 LYS 52 PHE 53 HIS 54 TRP 55 VAL 56 LYS 57 ASN 58 PRO 59 ASP 60 THR 61 ARG 62 PRO 63 LYS 64 ASP 65 PHE 66 TYR 67 LYS 68 PRO 69 SER 70 TYR 71 TYR 72 THR 73 GLY 74 GLY 75 TRP 76 ALA 77 ASP 78 ILE 79 LYS 80 VAL 81 PRO 82 GLY 83 ASN 84 TRP 85 GLU 86 ARG 87 GLN 88 GLY 89 TYR 90 GLY 91 THR 92 ALA 93 ILE 94 TYR 95 VAL 96 ASN 97 GLU 98 THR 99 TYR 100 GLU 101 PHE 102 ASP 103 ASP 104 LYS 105 MSE 106 PHE 107 ASN 108 PHE 109 LYS 110 LYS 111 ASN 112 PRO 113 PRO 114 LEU 115 VAL 116 PRO 117 TYR 118 LYS 119 GLU 120 ASN 121 GLU 122 VAL 123 GLY 124 SER 125 TYR 126 ARG 127 ARG 128 THR 129 PHE 130 LYS 131 VAL 132 PRO 133 ALA 134 GLY 135 TRP 136 GLU 137 GLY 138 ARG 139 ARG 140 VAL 141 VAL 142 LEU 143 CYS 144 CYS 145 GLU 146 GLY 147 VAL 148 ILE 149 SER 150 PHE 151 TYR 152 TYR 153 VAL 154 TRP 155 VAL 156 ASN 157 GLY 158 GLU 159 PHE 160 LEU 161 GLY 162 TYR 163 ASN 164 GLN 165 GLY 166 SER 167 LYS 168 THR 169 ALA 170 ALA 171 GLU 172 TRP 173 ASP 174 ILE 175 THR 176 ASP 177 LYS 178 LEU 179 THR 180 ASP 181 GLY 182 GLU 183 ASN 184 THR 185 ILE 186 ALA 187 LEU 188 GLU 189 VAL 190 TYR 191 ARG 192 TRP 193 SER 194 SER 195 GLY 196 ALA 197 TYR 198 LEU 199 GLU 200 CYS 201 GLN 202 ASP 203 MSE 204 TRP 205 ARG 206 LEU 207 SER 208 GLY 209 ILE 210 GLU 211 ARG 212 ASP 213 VAL 214 TYR 215 LEU 216 TYR 217 SER 218 THR 219 PRO 220 GLU 221 GLN 222 TYR 223 ILE 224 ALA 225 ASP 226 TYR 227 LYS 228 VAL 229 THR 230 SER 231 LEU 232 LEU 233 GLU 234 LYS 235 GLU 236 HIS 237 TYR 238 LYS 239 GLU 240 GLY 241 ILE 242 PHE 243 GLU 244 LEU 245 GLU 246 VAL 247 ALA 248 VAL 249 GLY 250 GLY 251 THR 252 THR 256 SER 257 SER 258 ILE 259 ALA 260 TYR 261 THR 262 LEU 263 LYS 264 ASP 265 ALA 266 SER 267 ASP 268 LYS 269 THR 270 VAL 271 LEU 272 GLU 273 GLY 274 SER 275 ARG 276 LYS 277 ASN 285 LEU 286 ILE 287 VAL 288 PHE 289 ASP 290 GLU 291 GLN 292 ARG 293 LEU 294 PRO 295 ASP 296 VAL 297 ARG 298 ARG 299 TRP 300 ASN 301 ALA 302 GLU 303 HIS 304 PRO 305 GLU 306 LEU 307 TYR 308 THR 309 LEU 310 LEU 311 LEU 312 GLU 313 LEU 314 LYS 315 ASP 316 ALA 317 GLY 318 GLY 319 LYS 320 VAL 321 THR 322 GLU 323 ILE 324 THR 325 GLY 326 THR 327 LYS 328 VAL 329 GLY 330 PHE 331 ARG 332 THR 333 SER 334 GLU 335 ILE 336 LYS 337 ASN 338 GLY 339 ARG 340 PHE 341 CYS 342 ILE 343 ASN 344 GLY 345 VAL 346 PRO 347 VAL 348 LEU 349 VAL 350 LYS 351 GLY 352 VAL 353 ASN 354 ARG 355 HIS 356 GLU 357 HIS 358 SER 359 GLN 360 LEU 361 GLY 362 ARG 363 THR 364 VAL 365 SER 366 LYS 367 GLU 368 LEU 369 MSE 370 GLU 371 GLN 372 ASP 373 ILE 374 ARG 375 LEU 376 MSE 377 LYS 378 GLN 379 HIS 380 ASN 381 ILE 382 ASN 383 THR 384 VAL 385 ARG 386 ASN 387 SER 388 HIS 389 TYR 390 PRO 391 ALA 392 HIS 393 PRO 394 TYR 395 TRP 396 TYR 397 GLN 398 LEU 399 CYS 400 ASP 401 ARG 402 TYR 403 GLY 404 LEU 405 TYR 406 VAL 407 ILE 408 ASP 409 GLU 410 ALA 411 ASN 412 ILE 413 GLU 414 SER 415 HIS 416 GLY 417 MSE 418 GLY 421 PRO 422 ALA 423 SER 424 LEU 425 ALA 426 LYS 427 ASP 428 SER 429 THR 430 TRP 431 LEU 432 PRO 433 ALA 434 HIS 435 ILE 436 ASP 437 ARG 438 THR 439 ARG 440 ARG 441 MSE 442 TYR 443 GLU 444 ARG 445 SER 446 LYS 447 ASN 448 HIS 449 PRO 450 SER 451 VAL 452 VAL 453 ILE 454 TRP 455 SER 456 LEU 457 GLY 458 ASN 459 GLU 460 ALA 461 GLY 462 ASN 463 GLY 464 ILE 465 ASN 466 PHE 467 GLU 468 ARG 469 THR 470 TYR 471 ASP 472 TRP 473 LEU 474 LYS 475 SER 476 VAL 477 GLU 478 LYS 479 ASN 480 ARG 481 PRO 482 VAL 483 GLN 484 TYR 485 GLU 486 ARG 487 ALA 488 GLU 489 GLU 490 ASN 491 TYR 492 ASN 493 THR 494 ASP 495 ILE 496 TYR 497 CYS 498 ARG 499 MSE 500 TYR 501 ARG 502 SER 503 VAL 504 ASP 505 VAL 506 ILE 507 ARG 508 ASN 509 TYR 510 VAL 511 VAL 512 ARG 513 LYS 514 ASP 515 ILE 516 TYR 517 ARG 518 PRO 519 PHE 520 ILE 521 LEU 522 CYS 523 GLU 524 TYR 525 LEU 526 HIS 527 ALA 528 MSE 529 GLY 530 ASN 531 SER 532 CYS 533 GLY 534 GLY 535 MSE 536 LYS 537 GLU 538 TYR 539 TRP 540 GLU 541 VAL 542 PHE 543 GLU 544 ASN 545 GLU 546 PRO 547 MSE 548 ALA 549 GLN 550 GLY 551 GLY 552 CYS 553 ILE 554 TRP 555 ASP 556 TRP 557 VAL 558 ASP 559 GLN 560 SER 561 PHE 562 ARG 563 GLU 564 VAL 565 ASP 566 LYS 567 ASP 568 GLY 569 LYS 570 TRP 571 TYR 572 TRP 573 THR 574 TYR 575 GLY 576 GLY 577 ASP 578 TYR 579 GLY 580 PRO 581 LYS 582 ASP 583 VAL 584 PRO 585 SER 586 PHE 587 GLY 588 ASN 589 PHE 590 CYS 591 CYS 592 ASN 593 GLY 594 LEU 595 VAL 596 ASN 597 ALA 598 VAL 599 ARG 600 GLU 601 PRO 602 HIS 603 PRO 604 HIS 605 LEU 606 LEU 607 GLU 608 VAL 609 LYS 610 LYS 611 ILE 612 TYR 613 GLN 614 ASN 615 ILE 616 LYS 617 SER 618 THR 619 LEU 620 ILE 621 ASP 622 LYS 623 LYS 624 ASN 625 LEU 626 THR 627 VAL 628 ARG 629 VAL 630 LYS 631 ASN 632 TRP 633 PHE 634 ASP 635 PHE 636 SER 637 ASP 638 LEU 639 ASN 640 GLU 641 TYR 642 ILE 643 LEU 644 HIS 645 TRP 646 LYS 647 VAL 648 THR 649 GLY 650 ASP 651 ASP 652 GLY 653 THR 654 VAL 655 LEU 656 ALA 657 GLU 658 GLY 659 ASN 660 LYS 661 GLU 662 VAL 663 ALA 664 CYS 665 GLU 666 PRO 667 HIS 668 ALA 669 THR 670 VAL 671 GLU 672 LEU 673 THR 674 LEU 675 GLY 676 ALA 677 VAL 678 GLN 679 LEU 680 PRO 681 LYS 682 THR 683 ILE 684 ARG 685 GLU 686 ALA 687 TYR 688 LEU 689 ASP 690 LEU 691 GLY 692 TRP 693 THR 694 ARG 695 LYS 696 LYS 697 SER 698 THR 699 PRO 700 LEU 701 VAL 702 ASP 703 THR 704 ALA 705 TRP 706 GLU 707 ILE 708 ALA 709 TYR 710 ASP 711 GLN 712 PHE 713 VAL 714 LEU 715 PRO 716 ALA 717 SER 718 GLY 719 LYS 720 VAL 721 TRP 722 ASN 723 GLY 724 LYS 725 PRO 726 SER 727 GLU 728 ALA 729 GLY 730 LYS 731 THR 732 THR 733 PHE 734 GLU 735 VAL 736 ASP 737 GLU 738 ASN 739 THR 740 GLY 741 ALA 742 LEU 743 LYS 744 SER 745 LEU 746 CYS 747 LEU 748 ASP 749 GLY 750 GLU 751 GLU 752 LEU 753 LEU 754 ALA 755 SER 756 PRO 757 VAL 758 THR 759 ILE 760 SER 761 LEU 762 PHE 763 ARG 764 PRO 765 ALA 766 THR 767 ASP 768 ASN 769 ASP 770 ASN 771 ARG 772 ASP 773 ARG 774 MSE 775 GLY 776 ALA 777 LYS 778 LEU 779 TRP 780 ARG 781 LYS 782 ALA 783 GLY 784 LEU 785 HIS 786 THR 787 LEU 788 THR 789 GLN 790 LYS 791 VAL 792 VAL 793 SER 794 LEU 795 LYS 796 GLU 797 SER 798 LYS 799 THR 800 SER 801 ALA 802 THR 803 ALA 804 GLN 805 VAL 806 ASN 807 ILE 808 LEU 809 ASN 810 VAL 811 THR 812 GLY 813 LYS 814 LYS 815 VAL 816 GLY 817 ASP 818 ALA 819 THR 820 LEU 821 GLU 822 TYR 823 THR 824 LEU 825 ASN 826 HIS 827 ASN 828 GLY 829 SER 830 LEU 831 LYS 832 VAL 833 GLN 834 THR 835 THR 836 PHE 837 GLN 838 PRO 839 ASP 840 THR 841 THR 842 TRP 843 VAL 844 LYS 845 SER 846 ILE 847 ALA 848 ARG 849 LEU 850 GLY 851 LEU 852 THR 853 PHE 854 GLU 855 MSE 856 ASN 857 ASP 858 THR 859 TYR 860 GLY 861 ASN 862 VAL 863 THR 864 TYR 865 LEU 866 GLY 867 ARG 868 GLY 869 GLU 870 HIS 871 GLU 872 THR 873 TYR 874 ILE 875 ASP 876 ARG 877 ASN 878 GLN 879 SER 880 GLY 881 LYS 882 ILE 883 GLY 884 ILE 885 TYR 886 THR 887 THR 888 THR 889 PRO 890 GLU 891 LYS 892 MSE 893 PHE 894 HIS 895 TYR 896 TYR 897 VAL 898 ILE 899 PRO 900 GLN 901 SER 902 THR 903 GLY 904 ASN 905 ARG 906 THR 907 ASP 908 VAL 909 ARG 910 TRP 911 VAL 912 LYS 913 LEU 914 ALA 915 ASP 916 ASP 917 SER 918 GLY 919 LYS 920 GLY 921 CYS 922 TRP 923 ILE 924 GLU 925 SER 926 ASP 927 SER 928 PRO 929 PHE 930 GLN 931 PHE 932 SER 933 ALA 934 LEU 935 PRO 936 PHE 937 SER 938 ASP 939 LEU 940 LEU 941 LEU 942 GLU 943 LYS 944 ALA 945 LEU 946 HIS 947 ILE 948 ASN 949 ASP 950 LEU 951 GLU 952 ARG 953 ASN 954 GLY 955 ARG 956 ILE 957 THR 958 VAL 959 HIS 960 LEU 961 ASP 962 ALA 963 LYS 964 GLN 965 ALA 966 GLY 967 VAL 968 GLY 969 THR 970 ALA 971 THR 972 CYS 973 GLY 974 PRO 975 GLY 976 VAL 977 LEU 978 PRO 979 PRO 980 TYR 981 LEU 982 VAL 983 PRO 984 LEU 985 GLY 986 LYS 987 GLN 988 THR 989 PHE 990 THR 991 PHE 992 THR 993 ILE 994 TYR 995 PRO 996 VAL 997 LYS 998

Ligands

Unit 2

K 1101