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Title | STRUCTURE OF THE SERRATIA MARCESCENS HEMOPHORE RECEPTOR HASR MUTANT IN COMPLEX WITH ITS HEMOPHORE HASA AND HEME | |
Keywords | OUTER MEMBRANE PROTEIN, BETA-BARREL, HEMOPHORE RECEPTOR, MEM OUTER MEMBRANE, TONB BOX, HEME, IRON, METAL-BINDING, SECRET MEMBRANE PROTEIN-HEME BINDING PROTEIN COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3DDR | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | HASR PROTEIN | A | 753 | 5885 | 0 |
2 | Protein | HASR PROTEIN | B | 753 | 5885 | 0 |
3 | Protein | HEMOPHORE HASA | C | 162 | 1176 | 0 |
4 | Protein | HEMOPHORE HASA | D | 162 | 1176 | 0 |
5 | Ligand | HASR PROTEIN | A | 2 | 0 | 7 |
6 | Ligand | HASR PROTEIN | B | 6 | 0 | 31 |
7 | Ligand | HEMOPHORE HASA | C | 1 | 0 | 43 |
8 | Ligand | HEMOPHORE HASA | D | 1 | 0 | 43 |
9 | Water | 13 | 0 | 13 | ||
total | 1853 | 14122 | 137 |
Unit 1 | ASN113 ASP114 TRP115 VAL116 TYR117 ASP118 GLU119 PRO120 ARG121 SER122 VAL123 SER124 VAL125 ILE126 SER127 ARG128 GLU129 GLN130 MET131 ASP132 ASN133 ARG134 PRO135 ALA136 ARG137 HIS138 ALA139 ALA140 ASP141 ILE142 LEU143 GLU144 GLN145 THR146 THR147 GLY148 ALA149 TYR150 SER151 SER152 VAL153 SER154 GLN155 GLN156 ASP157 PRO158 ALA159 LEU160 SER161 VAL162 ASN163 ILE164 ARG165 GLY166 ILE167 GLN168 ASP169 TYR170 GLY171 ARG172 VAL173 ASN174 MET175 ASN176 ILE177 ASP178 GLY179 MET180 ARG181 GLN182 ASN183 PHE184 GLN185 LYS186 SER187 GLY188 HIS189 GLY190 GLN191 ARG192 ASN193 GLY194 THR195 MET196 TYR197 ILE198 ASP199 SER200 GLU201 LEU202 LEU203 SER204 GLY205 VAL206 THR207 ILE208 ASP209 LYS210 GLY211 THR212 THR213 GLY214 GLY215 MET216 GLY217 SER218 ALA219 GLY220 THR221 LEU222 GLY223 GLY224 ILE225 ALA226 THR227 PHE228 ASN229 THR230 VAL231 SER232 ALA233 SER234 ASP235 PHE236 LEU237 ALA238 PRO239 GLY240 LYS241 GLU242 LEU243 GLY244 GLY245 LYS246 LEU247 HIS248 ALA249 SER250 THR251 GLY252 ASP253 ASN254 GLY255 THR256 HIS257 PHE258 ILE259 GLY260 SER261 GLY262 ILE263 LEU264 ALA265 LEU266 GLY267 ASN268 GLU269 THR270 GLY271 ASP272 ILE273 LEU274 LEU275 ALA276 ALA277 SER278 GLU279 ARG280 HIS281 LEU282 GLY283 ASP284 TYR285 TRP286 PRO287 GLY288 ASN289 LYS290 GLY291 ASP292 ILE293 GLY294 ASN295 ILE296 ARG297 ILE298 ASN299 ASN300 ASP301 THR302 GLY303 ASN304 TYR305 ASP306 ARG307 TYR308 ALA309 GLU310 SER311 ILE312 LYS313 ASN314 ASN315 LYS316 ILE317 PRO318 ASP319 THR320 HIS321 TYR322 ARG323 MET324 HIS325 SER326 ARG327 LEU328 ALA329 LYS330 VAL331 GLY332 TRP333 ASN334 LEU335 PRO336 ALA337 ASN338 GLN339 ARG340 LEU341 GLN342 LEU343 SER344 TYR345 LEU346 GLN347 THR348 GLN349 THR350 ALA351 SER352 PRO353 ILE354 ALA355 GLY356 THR357 LEU358 THR359 ASN360 LEU361 GLY362 THR363 ARG364 PRO365 PRO366 TYR367 GLU368 LEU369 GLY370 TRP371 LYS372 ARG373 THR374 GLY375 TYR376 THR377 ASP378 VAL379 MET380 ALA381 ARG382 ASN383 ALA384 ALA385 PHE386 ASP387 TYR388 SER389 LEU390 ALA391 PRO392 GLU393 ASP394 VAL395 ASP396 TRP397 LEU398 ASP399 PHE400 GLN401 ALA402 LYS403 LEU404 TYR405 TYR406 VAL407 ASP408 THR409 GLN410 ASP411 ASP412 SER413 ASP414 THR415 TYR416 SER417 THR418 SER419 SER420 LEU421 LEU422 ASP423 ASN424 GLY425 TYR426 ALA427 THR428 ARG429 THR430 ARG431 LEU432 ARG433 THR434 TYR435 GLY436 ALA437 GLN438 ALA439 GLN440 ASN441 THR442 SER443 ARG444 PHE445 SER446 LEU447 ALA448 PRO449 GLY450 HIS451 ASP452 PHE453 ARG454 ALA455 ASN456 TYR457 GLY458 LEU459 GLU460 PHE461 TYR462 TYR463 ASP464 LYS465 ALA466 THR467 SER468 ASP469 SER470 SER471 ARG472 GLN473 GLY474 MET475 GLU476 GLY477 VAL478 THR479 PRO480 ALA481 GLY482 ASN483 ARG484 SER485 VAL486 ALA487 SER488 LEU489 PHE490 ALA491 ASN492 LEU493 THR494 TYR495 ASP496 TYR497 ASP498 GLY499 TRP500 LEU501 THR502 LEU503 GLU504 GLY505 GLY506 LEU507 ARG508 TYR509 ASP510 ARG511 TYR512 ARG513 LEU514 ARG515 GLY516 GLN517 THR518 GLY519 LEU520 SER521 TYR522 PRO523 ASP524 LEU525 ALA526 LYS527 ASP528 GLY529 GLN530 ARG531 TYR532 THR533 ILE534 ASP535 ASN536 PRO537 CYS538 LYS539 ALA540 LEU541 ARG542 LEU543 THR544 GLY545 CYS546 SER547 THR548 THR549 THR550 ARG551 GLU552 ASP553 TRP554 ASP555 VAL556 ASP557 ARG558 ASP559 GLN560 GLY561 LYS562 LEU563 SER564 PRO565 THR566 LEU567 ALA568 VAL569 ALA570 VAL571 ARG572 PRO573 GLY574 VAL575 GLU576 TRP577 LEU578 GLU579 LEU580 TYR581 THR582 THR583 TYR584 GLY585 LYS586 SER587 TRP588 ARG589 PRO590 PRO591 ALA592 ILE593 THR594 GLU595 THR596 LEU597 THR598 ASN599 GLY600 SER601 ALA602 HIS603 SER604 SER605 SER606 THR607 GLN608 TYR609 PRO610 ASN611 PRO612 PHE613 LEU614 GLN615 PRO616 GLU617 ARG618 SER619 ARG620 ALA621 TRP622 GLU623 VAL624 GLY625 PHE626 ASN627 VAL628 GLN629 GLN630 PRO631 ASP632 LEU633 TRP634 PHE635 GLU636 GLY637 ASP638 ARG639 LEU640 VAL641 ALA642 LYS643 VAL644 ALA645 TYR646 PHE647 ASP648 THR649 LYS650 VAL651 ASP652 ASN653 TYR654 ILE655 ASN656 LEU657 ALA658 ILE659 ASP660 ARG661 ASN662 LYS663 PRO664 GLY665 LEU666 VAL667 GLN668 PRO669 SER670 GLY671 GLY672 ASN673 ALA674 ALA675 TYR676 VAL677 ASN678 ASN679 LEU680 SER681 LYS682 THR683 ARG684 PHE685 ARG686 GLY687 LEU688 GLU689 TYR690 GLN691 LEU692 ASN693 TYR694 ASP695 ALA696 GLY697 VAL698 PHE699 TYR700 ALA701 ASP702 LEU703 THR704 TYR705 THR706 HIS707 MET708 ILE709 GLY710 LYS711 ASN712 GLU713 PHE714 CYS715 SER716 ASN717 LYS718 ALA719 TRP720 LEU721 GLY722 GLY723 ARG724 LEU725 ARG726 TYR727 GLY728 ASP729 GLY730 SER731 ARG732 ARG733 GLY734 ASN735 PHE736 TYR737 VAL738 GLU739 PRO740 ASP741 ALA742 ALA743 SER744 ASN745 ASP746 PHE747 VAL748 THR749 CYS750 ASP751 GLY752 GLY753 THR754 GLN755 PHE756 GLY757 SER758 ALA759 ALA760 TYR761 LEU762 PRO763 GLY764 ASP765 ARG766 GLY767 SER768 VAL769 THR770 LEU771 GLY772 GLY773 ARG774 ALA775 PHE776 ASP777 ARG778 LYS779 LEU780 ASP781 ALA782 GLY783 VAL784 THR785 VAL786 ARG787 PHE788 ALA789 PRO790 GLY791 TYR792 GLN793 ASP794 SER795 SER796 VAL797 PRO798 SER799 ASN800 TYR801 PRO802 TYR803 LEU804 ALA805 ASP806 TRP807 PRO808 LYS809 TYR810 THR811 LEU812 PHE813 ASP814 LEU815 TYR816 ALA817 SER818 TYR819 LYS820 LEU821 THR822 ASP823 SER824 LEU825 THR826 LEU827 ARG828 GLY829 SER830 VAL831 GLU832 ASN833 LEU834 THR835 ASN836 ARG837 ALA838 TYR839 VAL840 VAL841 SER842 TYR843 GLY844 GLU845 THR846 LEU847 ALA848 ASN849 THR850 LEU851 GLY852 ARG853 GLY854 ARG855 THR856 VAL857 GLN858 GLY859 GLY860 VAL861 GLU862 TYR863 ARG864 PHE865 |
Unit 2 | ASN113 ASP114 TRP115 VAL116 TYR117 ASP118 GLU119 PRO120 ARG121 SER122 VAL123 SER124 VAL125 ILE126 SER127 ARG128 GLU129 GLN130 MET131 ASP132 ASN133 ARG134 PRO135 ALA136 ARG137 HIS138 ALA139 ALA140 ASP141 ILE142 LEU143 GLU144 GLN145 THR146 THR147 GLY148 ALA149 TYR150 SER151 SER152 VAL153 SER154 GLN155 GLN156 ASP157 PRO158 ALA159 LEU160 SER161 VAL162 ASN163 ILE164 ARG165 GLY166 ILE167 GLN168 ASP169 TYR170 GLY171 ARG172 VAL173 ASN174 MET175 ASN176 ILE177 ASP178 GLY179 MET180 ARG181 GLN182 ASN183 PHE184 GLN185 LYS186 SER187 GLY188 HIS189 GLY190 GLN191 ARG192 ASN193 GLY194 THR195 MET196 TYR197 ILE198 ASP199 SER200 GLU201 LEU202 LEU203 SER204 GLY205 VAL206 THR207 ILE208 ASP209 LYS210 GLY211 THR212 THR213 GLY214 GLY215 MET216 GLY217 SER218 ALA219 GLY220 THR221 LEU222 GLY223 GLY224 ILE225 ALA226 THR227 PHE228 ASN229 THR230 VAL231 SER232 ALA233 SER234 ASP235 PHE236 LEU237 ALA238 PRO239 GLY240 LYS241 GLU242 LEU243 GLY244 GLY245 LYS246 LEU247 HIS248 ALA249 SER250 THR251 GLY252 ASP253 ASN254 GLY255 THR256 HIS257 PHE258 ILE259 GLY260 SER261 GLY262 ILE263 LEU264 ALA265 LEU266 GLY267 ASN268 GLU269 THR270 GLY271 ASP272 ILE273 LEU274 LEU275 ALA276 ALA277 SER278 GLU279 ARG280 HIS281 LEU282 GLY283 ASP284 TYR285 TRP286 PRO287 GLY288 ASN289 LYS290 GLY291 ASP292 ILE293 GLY294 ASN295 ILE296 ARG297 ILE298 ASN299 ASN300 ASP301 THR302 GLY303 ASN304 TYR305 ASP306 ARG307 TYR308 ALA309 GLU310 SER311 ILE312 LYS313 ASN314 ASN315 LYS316 ILE317 PRO318 ASP319 THR320 HIS321 TYR322 ARG323 MET324 HIS325 SER326 ARG327 LEU328 ALA329 LYS330 VAL331 GLY332 TRP333 ASN334 LEU335 PRO336 ALA337 ASN338 GLN339 ARG340 LEU341 GLN342 LEU343 SER344 TYR345 LEU346 GLN347 THR348 GLN349 THR350 ALA351 SER352 PRO353 ILE354 ALA355 GLY356 THR357 LEU358 THR359 ASN360 LEU361 GLY362 THR363 ARG364 PRO365 PRO366 TYR367 GLU368 LEU369 GLY370 TRP371 LYS372 ARG373 THR374 GLY375 TYR376 THR377 ASP378 VAL379 MET380 ALA381 ARG382 ASN383 ALA384 ALA385 PHE386 ASP387 TYR388 SER389 LEU390 ALA391 PRO392 GLU393 ASP394 VAL395 ASP396 TRP397 LEU398 ASP399 PHE400 GLN401 ALA402 LYS403 LEU404 TYR405 TYR406 VAL407 ASP408 THR409 GLN410 ASP411 ASP412 SER413 ASP414 THR415 TYR416 SER417 THR418 SER419 SER420 LEU421 LEU422 ASP423 ASN424 GLY425 TYR426 ALA427 THR428 ARG429 THR430 ARG431 LEU432 ARG433 THR434 TYR435 GLY436 ALA437 GLN438 ALA439 GLN440 ASN441 THR442 SER443 ARG444 PHE445 SER446 LEU447 ALA448 PRO449 GLY450 HIS451 ASP452 PHE453 ARG454 ALA455 ASN456 TYR457 GLY458 LEU459 GLU460 PHE461 TYR462 TYR463 ASP464 LYS465 ALA466 THR467 SER468 ASP469 SER470 SER471 ARG472 GLN473 GLY474 MET475 GLU476 GLY477 VAL478 THR479 PRO480 ALA481 GLY482 ASN483 ARG484 SER485 VAL486 ALA487 SER488 LEU489 PHE490 ALA491 ASN492 LEU493 THR494 TYR495 ASP496 TYR497 ASP498 GLY499 TRP500 LEU501 THR502 LEU503 GLU504 GLY505 GLY506 LEU507 ARG508 TYR509 ASP510 ARG511 TYR512 ARG513 LEU514 ARG515 GLY516 GLN517 THR518 GLY519 LEU520 SER521 TYR522 PRO523 ASP524 LEU525 ALA526 LYS527 ASP528 GLY529 GLN530 ARG531 TYR532 THR533 ILE534 ASP535 ASN536 PRO537 CYS538 LYS539 ALA540 LEU541 ARG542 LEU543 THR544 GLY545 CYS546 SER547 THR548 THR549 THR550 ARG551 GLU552 ASP553 TRP554 ASP555 VAL556 ASP557 ARG558 ASP559 GLN560 GLY561 LYS562 LEU563 SER564 PRO565 THR566 LEU567 ALA568 VAL569 ALA570 VAL571 ARG572 PRO573 GLY574 VAL575 GLU576 TRP577 LEU578 GLU579 LEU580 TYR581 THR582 THR583 TYR584 GLY585 LYS586 SER587 TRP588 ARG589 PRO590 PRO591 ALA592 ILE593 THR594 GLU595 THR596 LEU597 THR598 ASN599 GLY600 SER601 ALA602 HIS603 SER604 SER605 SER606 THR607 GLN608 TYR609 PRO610 ASN611 PRO612 PHE613 LEU614 GLN615 PRO616 GLU617 ARG618 SER619 ARG620 ALA621 TRP622 GLU623 VAL624 GLY625 PHE626 ASN627 VAL628 GLN629 GLN630 PRO631 ASP632 LEU633 TRP634 PHE635 GLU636 GLY637 ASP638 ARG639 LEU640 VAL641 ALA642 LYS643 VAL644 ALA645 TYR646 PHE647 ASP648 THR649 LYS650 VAL651 ASP652 ASN653 TYR654 ILE655 ASN656 LEU657 ALA658 ILE659 ASP660 ARG661 ASN662 LYS663 PRO664 GLY665 LEU666 VAL667 GLN668 PRO669 SER670 GLY671 GLY672 ASN673 ALA674 ALA675 TYR676 VAL677 ASN678 ASN679 LEU680 SER681 LYS682 THR683 ARG684 PHE685 ARG686 GLY687 LEU688 GLU689 TYR690 GLN691 LEU692 ASN693 TYR694 ASP695 ALA696 GLY697 VAL698 PHE699 TYR700 ALA701 ASP702 LEU703 THR704 TYR705 THR706 HIS707 MET708 ILE709 GLY710 LYS711 ASN712 GLU713 PHE714 CYS715 SER716 ASN717 LYS718 ALA719 TRP720 LEU721 GLY722 GLY723 ARG724 LEU725 ARG726 TYR727 GLY728 ASP729 GLY730 SER731 ARG732 ARG733 GLY734 ASN735 PHE736 TYR737 VAL738 GLU739 PRO740 ASP741 ALA742 ALA743 SER744 ASN745 ASP746 PHE747 VAL748 THR749 CYS750 ASP751 GLY752 GLY753 THR754 GLN755 PHE756 GLY757 SER758 ALA759 ALA760 TYR761 LEU762 PRO763 GLY764 ASP765 ARG766 GLY767 SER768 VAL769 THR770 LEU771 GLY772 GLY773 ARG774 ALA775 PHE776 ASP777 ARG778 LYS779 LEU780 ASP781 ALA782 GLY783 VAL784 THR785 VAL786 ARG787 PHE788 ALA789 PRO790 GLY791 TYR792 GLN793 ASP794 SER795 SER796 VAL797 PRO798 SER799 ASN800 TYR801 PRO802 TYR803 LEU804 ALA805 ASP806 TRP807 PRO808 LYS809 TYR810 THR811 LEU812 PHE813 ASP814 LEU815 TYR816 ALA817 SER818 TYR819 LYS820 LEU821 THR822 ASP823 SER824 LEU825 THR826 LEU827 ARG828 GLY829 SER830 VAL831 GLU832 ASN833 LEU834 THR835 ASN836 ARG837 ALA838 TYR839 VAL840 VAL841 SER842 TYR843 GLY844 GLU845 THR846 LEU847 ALA848 ASN849 THR850 LEU851 GLY852 ARG853 GLY854 ARG855 THR856 VAL857 GLN858 GLY859 GLY860 VAL861 GLU862 TYR863 ARG864 PHE865 |
Unit 3 | PRO1 ALA2 PHE3 SER4 VAL5 ASN6 TYR7 ASP8 SER9 SER10 PHE11 GLY12 GLY13 TYR14 SER15 ILE16 HIS17 ASP18 TYR19 LEU20 GLY21 GLN22 TRP23 ALA24 SER25 THR26 PHE27 GLY28 ASN41 SER42 GLY43 GLY44 PHE45 TYR46 GLY47 GLY48 SER49 LEU50 SER51 GLY52 SER53 GLN54 TYR55 ALA56 ILE57 SER58 SER59 THR60 ALA61 ASN62 GLN63 VAL64 THR65 ALA66 PHE67 VAL68 ALA69 GLY70 GLY71 ASN72 LEU73 THR74 TYR75 THR76 LEU77 PHE78 ASN79 GLU80 PRO81 ALA82 HIS83 THR84 LEU85 TYR86 GLY87 GLN88 LEU89 ASP90 SER91 LEU92 SER93 PHE94 GLY95 ASP96 GLY97 LEU98 SER99 GLY100 GLY101 ASP102 THR103 SER104 PRO105 TYR106 SER107 ILE108 GLN109 VAL110 PRO111 ASP112 VAL113 SER114 PHE115 GLY116 GLY117 LEU118 ASN119 LEU120 SER121 SER122 LEU123 GLN124 ALA125 GLN126 GLY127 HIS128 ASP129 GLY130 VAL131 VAL132 HIS133 GLN134 VAL135 VAL136 TYR137 GLY138 LEU139 MET140 SER141 GLY142 ASP143 THR144 GLY145 ALA146 LEU147 GLU148 THR149 ALA150 LEU151 ASN152 GLY153 ILE154 LEU155 ASP156 ASP157 TYR158 GLY159 LEU160 SER161 VAL162 ASN163 SER164 THR165 PHE166 ASP167 GLN168 VAL169 ALA170 ALA171 ALA172 THR173 ALA174 |
Unit 4 | PRO1 ALA2 PHE3 SER4 VAL5 ASN6 TYR7 ASP8 SER9 SER10 PHE11 GLY12 GLY13 TYR14 SER15 ILE16 HIS17 ASP18 TYR19 LEU20 GLY21 GLN22 TRP23 ALA24 SER25 THR26 PHE27 GLY28 ASN41 SER42 GLY43 GLY44 PHE45 TYR46 GLY47 GLY48 SER49 LEU50 SER51 GLY52 SER53 GLN54 TYR55 ALA56 ILE57 SER58 SER59 THR60 ALA61 ASN62 GLN63 VAL64 THR65 ALA66 PHE67 VAL68 ALA69 GLY70 GLY71 ASN72 LEU73 THR74 TYR75 THR76 LEU77 PHE78 ASN79 GLU80 PRO81 ALA82 HIS83 THR84 LEU85 TYR86 GLY87 GLN88 LEU89 ASP90 SER91 LEU92 SER93 PHE94 GLY95 ASP96 GLY97 LEU98 SER99 GLY100 GLY101 ASP102 THR103 SER104 PRO105 TYR106 SER107 ILE108 GLN109 VAL110 PRO111 ASP112 VAL113 SER114 PHE115 GLY116 GLY117 LEU118 ASN119 LEU120 SER121 SER122 LEU123 GLN124 ALA125 GLN126 GLY127 HIS128 ASP129 GLY130 VAL131 VAL132 HIS133 GLN134 VAL135 VAL136 TYR137 GLY138 LEU139 MET140 SER141 GLY142 ASP143 THR144 GLY145 ALA146 LEU147 GLU148 THR149 ALA150 LEU151 ASN152 GLY153 ILE154 LEU155 ASP156 ASP157 TYR158 GLY159 LEU160 SER161 VAL162 ASN163 SER164 THR165 PHE166 ASP167 GLN168 VAL169 ALA170 ALA171 ALA172 THR173 ALA174 |
Unit 5 | NA866 GOL867 |
Unit 6 | NA866 GOL867 GOL868 GOL869 GOL870 GOL871 |
Unit 7 | HEM200 |
Unit 8 | HEM200 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |