3DDI - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE MIMIVIRUS NDK +KPN-N62L-R107G TRIPL COMPLEXED WITH TDP
• Keywords: TDP PHOSPHOTRANSFERASE, ATP-BINDING, KINASE, MAGNESIUM, META BINDING, NUCLEOTIDE METABOLISM, NUCLEOTIDE-BINDING, PHOSPHO TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3DDI	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	NUCLEOSIDE DIPHOSPHATE KINASE	A	133	1056	0
2	Protein	NUCLEOSIDE DIPHOSPHATE KINASE	B	133	1056	0
3	Ligand	NUCLEOSIDE DIPHOSPHATE KINASE	A	2	0	26
4	Ligand	NUCLEOSIDE DIPHOSPHATE KINASE	B	2	0	26
5	Water			167	0	167
total				437	2112	219

Proteins

Unit 1

LEU 1 GLN 2 ARG 3 THR 4 LEU 5 VAL 6 LEU 7 ILE 8 LYS 9 PRO 10 ASP 11 ALA 12 PHE 13 GLU 14 ARG 15 SER 16 LEU 17 VAL 18 ALA 19 GLU 20 ILE 21 MET 22 GLY 23 ARG 24 ILE 25 GLU 26 LYS 27 LYS 28 ASN 29 PHE 30 LYS 31 ILE 32 VAL 33 SER 34 MET 35 LYS 36 PHE 37 TRP 38 SER 39 LYS 40 ALA 41 PRO 42 ARG 43 ASN 44 LEU 45 ILE 46 GLU 47 GLN 48 HIS 49 TYR 50 LYS 51 GLU 52 HIS 53 SER 54 GLU 55 GLN 56 SER 57 TYR 58 PHE 59 ASN 60 ASP 61 LEU 62 CYS 63 ASP 64 PHE 65 MET 66 VAL 67 SER 68 GLY 69 PRO 70 ILE 71 ILE 72 SER 73 ILE 74 VAL 75 TYR 76 GLU 77 GLY 78 THR 79 ASP 80 ALA 81 ILE 82 SER 83 LYS 84 ILE 85 ARG 86 ARG 87 LEU 88 GLN 89 GLY 90 ASN 91 THR 92 ASN 93 PRO 94 LEU 95 ALA 96 SER 97 ALA 98 PRO 99 GLY 100 THR 101 ILE 102 ARG 103 GLY 104 ASP 105 LEU 106 ALA 107 ASN 108 ASP 109 ILE 110 GLY 111 GLU 112 ASN 113 LEU 114 ILE 115 HIS 116 ALA 117 SER 118 ASP 119 SER 120 GLU 121 ASP 122 SER 123 ALA 124 VAL 125 ASP 126 GLU 127 ILE 128 SER 129 ILE 130 TRP 131 PHE 132 PRO 133

Unit 2

LEU 1 GLN 2 ARG 3 THR 4 LEU 5 VAL 6 LEU 7 ILE 8 LYS 9 PRO 10 ASP 11 ALA 12 PHE 13 GLU 14 ARG 15 SER 16 LEU 17 VAL 18 ALA 19 GLU 20 ILE 21 MET 22 GLY 23 ARG 24 ILE 25 GLU 26 LYS 27 LYS 28 ASN 29 PHE 30 LYS 31 ILE 32 VAL 33 SER 34 MET 35 LYS 36 PHE 37 TRP 38 SER 39 LYS 40 ALA 41 PRO 42 ARG 43 ASN 44 LEU 45 ILE 46 GLU 47 GLN 48 HIS 49 TYR 50 LYS 51 GLU 52 HIS 53 SER 54 GLU 55 GLN 56 SER 57 TYR 58 PHE 59 ASN 60 ASP 61 LEU 62 CYS 63 ASP 64 PHE 65 MET 66 VAL 67 SER 68 GLY 69 PRO 70 ILE 71 ILE 72 SER 73 ILE 74 VAL 75 TYR 76 GLU 77 GLY 78 THR 79 ASP 80 ALA 81 ILE 82 SER 83 LYS 84 ILE 85 ARG 86 ARG 87 LEU 88 GLN 89 GLY 90 ASN 91 THR 92 ASN 93 PRO 94 LEU 95 ALA 96 SER 97 ALA 98 PRO 99 GLY 100 THR 101 ILE 102 ARG 103 GLY 104 ASP 105 LEU 106 ALA 107 ASN 108 ASP 109 ILE 110 GLY 111 GLU 112 ASN 113 LEU 114 ILE 115 HIS 116 ALA 117 SER 118 ASP 119 SER 120 GLU 121 ASP 122 SER 123 ALA 124 VAL 125 ASP 126 GLU 127 ILE 128 SER 129 ILE 130 TRP 131 PHE 132 PRO 133

Ligands

Unit 3	MG 142 TYD 201
Unit 4	MG 142 TYD 201