3DBN - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE STREPTOCCOCUS SUIS SEROTYPE2 D- MANNONATE DEHYDRATASE IN COMPLEX WITH ITS SUBSTRATE
• Keywords: TIM BARREL, LYASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3DBN	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	MANNONATE DEHYDRATASE	A	349	2737	0
2	Protein	MANNONATE DEHYDRATASE	B	349	2732	0
3	Ligand	MANNONATE DEHYDRATASE	B	1	0	1
4	Ligand	MANNONATE DEHYDRATASE	A	2	0	14
total				701	5469	15

Proteins

Unit 1

SER 19 HIS 20 MET 21 LYS 22 MET 23 SER 24 PHE 25 ARG 26 TRP 27 TYR 28 GLY 29 LYS 30 LYS 31 ASP 32 PRO 33 VAL 34 THR 35 LEU 36 GLU 37 GLU 38 ILE 39 LYS 40 ALA 41 ILE 42 PRO 43 GLY 44 MET 45 GLN 46 GLY 47 ILE 48 VAL 49 THR 50 ALA 51 VAL 52 TYR 53 ASP 54 VAL 55 PRO 56 VAL 57 GLY 58 GLN 59 ALA 60 TRP 61 PRO 62 LEU 63 GLU 64 ASN 65 ILE 66 LEU 67 GLU 68 LEU 69 LYS 70 LYS 71 MET 72 VAL 73 GLU 74 GLU 75 ALA 76 GLY 77 LEU 78 GLU 79 ILE 80 THR 81 VAL 82 ILE 83 GLU 84 SER 85 ILE 86 PRO 87 VAL 88 HIS 89 GLU 90 ASP 91 ILE 92 LYS 93 GLN 94 GLY 95 LYS 96 PRO 97 ASN 98 ARG 99 ASP 100 ALA 101 LEU 102 ILE 103 GLU 104 ASN 105 TYR 106 LYS 107 THR 108 SER 109 ILE 110 ARG 111 ASN 112 VAL 113 GLY 114 ALA 115 ALA 116 GLY 117 ILE 118 PRO 119 VAL 120 VAL 121 CYS 122 TYR 123 ASN 124 PHE 125 MET 126 PRO 127 VAL 128 PHE 129 ASP 130 TRP 131 THR 132 ARG 133 SER 134 ASP 135 LEU 136 HIS 137 HIS 138 PRO 139 LEU 140 PRO 141 ASP 142 GLY 143 SER 144 THR 145 SER 146 LEU 147 ALA 148 PHE 149 LEU 150 LYS 151 SER 152 ASP 153 LEU 154 ALA 155 GLY 156 VAL 157 ASP 158 PRO 159 SER 174 LYS 175 GLU 176 GLU 177 MET 178 LYS 179 ALA 180 ILE 181 ILE 182 GLU 183 ASN 184 TYR 185 ARG 186 GLN 187 ASN 188 ILE 189 SER 190 GLU 191 GLU 192 ASP 193 LEU 194 TRP 195 ALA 196 ASN 197 LEU 198 GLU 199 TYR 200 PHE 201 ILE 202 LYS 203 ALA 204 ILE 205 LEU 206 PRO 207 THR 208 ALA 209 GLU 210 GLU 211 ALA 212 GLY 213 VAL 214 LYS 215 MET 216 ALA 217 ILE 218 HIS 219 PRO 220 ASP 221 ASP 222 PRO 223 PRO 224 TYR 225 GLY 226 ILE 227 PHE 228 GLY 229 LEU 230 PRO 231 ARG 232 ILE 233 ILE 234 THR 235 GLY 236 GLN 237 GLU 238 ALA 239 VAL 240 GLU 241 ARG 242 PHE 243 LEU 244 ASN 245 LEU 246 TYR 247 ASP 248 SER 249 GLU 250 HIS 251 ASN 252 GLY 253 ILE 254 THR 255 MET 256 CYS 257 VAL 258 GLY 259 SER 260 TYR 261 ALA 262 SER 263 ASP 264 PRO 265 LYS 266 ASN 267 ASP 268 VAL 269 LEU 270 ALA 271 MET 272 THR 273 GLU 274 TYR 275 ALA 276 LEU 277 LYS 278 ARG 279 ASN 280 ARG 281 ILE 282 ASN 283 PHE 284 MET 285 HIS 286 THR 287 ARG 288 ASN 289 VAL 290 THR 291 ALA 292 GLY 293 ALA 294 TRP 295 GLY 296 PHE 297 GLN 298 GLU 299 THR 300 ALA 301 HIS 302 LEU 303 SER 304 GLN 305 ALA 306 GLY 307 ASP 308 ILE 309 ASP 310 MET 311 ASN 312 ALA 313 VAL 314 VAL 315 LYS 316 LEU 317 LEU 318 VAL 319 ASP 320 TYR 321 ASP 322 TRP 323 GLN 324 GLY 325 SER 326 LEU 327 ARG 328 PRO 329 ASP 330 HIS 331 GLY 332 ARG 333 ARG 334 ILE 335 TRP 336 GLY 337 ASP 338 GLN 339 THR 340 LYS 341 THR 342 PRO 343 GLY 344 TYR 345 GLY 346 LEU 347 TYR 348 ASP 349 ARG 350 ALA 351 LEU 352 GLY 353 ALA 354 THR 355 TYR 356 PHE 357 ASN 358 GLY 359 LEU 360 TYR 361 GLU 362 ALA 363 ASN 364 MET 365 ARG 366 ALA 367 ALA 368 GLY 369 LYS 370 THR 371 PRO 372 ASP 373 PHE 374 GLY 375 ILE 376 LYS 377 ALA 378 LYS 379 THR 380 VAL 381

Unit 2

GLY 18 SER 19 HIS 20 MET 21 LYS 22 MET 23 SER 24 PHE 25 ARG 26 TRP 27 TYR 28 GLY 29 LYS 30 LYS 31 ASP 32 PRO 33 VAL 34 THR 35 LEU 36 GLU 37 GLU 38 ILE 39 LYS 40 ALA 41 ILE 42 PRO 43 GLY 44 MET 45 GLN 46 GLY 47 ILE 48 VAL 49 THR 50 ALA 51 VAL 52 TYR 53 ASP 54 VAL 55 PRO 56 VAL 57 GLY 58 GLN 59 ALA 60 TRP 61 PRO 62 LEU 63 GLU 64 ASN 65 ILE 66 LEU 67 GLU 68 LEU 69 LYS 70 LYS 71 MET 72 VAL 73 GLU 74 GLU 75 ALA 76 GLY 77 LEU 78 GLU 79 ILE 80 THR 81 VAL 82 ILE 83 GLU 84 SER 85 ILE 86 PRO 87 VAL 88 HIS 89 GLU 90 ASP 91 ILE 92 LYS 93 GLN 94 GLY 95 LYS 96 PRO 97 ASN 98 ARG 99 ASP 100 ALA 101 LEU 102 ILE 103 GLU 104 ASN 105 TYR 106 LYS 107 THR 108 SER 109 ILE 110 ARG 111 ASN 112 VAL 113 GLY 114 ALA 115 ALA 116 GLY 117 ILE 118 PRO 119 VAL 120 VAL 121 CYS 122 TYR 123 ASN 124 PHE 125 MET 126 PRO 127 VAL 128 PHE 129 ASP 130 TRP 131 THR 132 ARG 133 SER 134 ASP 135 LEU 136 HIS 137 HIS 138 PRO 139 LEU 140 PRO 141 ASP 142 GLY 143 SER 144 THR 145 SER 146 LEU 147 ALA 148 PHE 149 LEU 150 LYS 151 SER 152 ASP 153 LEU 154 ALA 155 GLY 156 VAL 157 ASP 158 PRO 159 VAL 160 ALA 180 ILE 181 ILE 182 GLU 183 ASN 184 TYR 185 ARG 186 GLN 187 ASN 188 ILE 189 SER 190 GLU 191 GLU 192 ASP 193 LEU 194 TRP 195 ALA 196 ASN 197 LEU 198 GLU 199 TYR 200 PHE 201 ILE 202 LYS 203 ALA 204 ILE 205 LEU 206 PRO 207 THR 208 ALA 209 GLU 210 GLU 211 ALA 212 GLY 213 VAL 214 LYS 215 MET 216 ALA 217 ILE 218 HIS 219 PRO 220 ASP 221 ASP 222 PRO 223 PRO 224 TYR 225 GLY 226 ILE 227 PHE 228 GLY 229 LEU 230 PRO 231 ARG 232 ILE 233 ILE 234 THR 235 GLY 236 GLN 237 GLU 238 ALA 239 VAL 240 GLU 241 ARG 242 PHE 243 LEU 244 ASN 245 LEU 246 TYR 247 ASP 248 SER 249 GLU 250 HIS 251 ASN 252 GLY 253 ILE 254 THR 255 MET 256 CYS 257 VAL 258 GLY 259 SER 260 TYR 261 ALA 262 SER 263 ASP 264 PRO 265 LYS 266 ASN 267 ASP 268 VAL 269 LEU 270 ALA 271 MET 272 THR 273 GLU 274 TYR 275 ALA 276 LEU 277 LYS 278 ARG 279 ASN 280 ARG 281 ILE 282 ASN 283 PHE 284 MET 285 HIS 286 THR 287 ARG 288 ASN 289 VAL 290 THR 291 ALA 292 GLY 293 ALA 294 TRP 295 GLY 296 PHE 297 GLN 298 GLU 299 THR 300 ALA 301 HIS 302 LEU 303 SER 304 GLN 305 ALA 306 GLY 307 ASP 308 ILE 309 ASP 310 MET 311 ASN 312 ALA 313 VAL 314 VAL 315 LYS 316 LEU 317 LEU 318 VAL 319 ASP 320 TYR 321 ASP 322 TRP 323 GLN 324 GLY 325 SER 326 LEU 327 ARG 328 PRO 329 ASP 330 HIS 331 GLY 332 ARG 333 ARG 334 ILE 335 TRP 336 GLY 337 ASP 338 GLN 339 THR 340 LYS 341 THR 342 PRO 343 GLY 344 TYR 345 GLY 346 LEU 347 TYR 348 ASP 349 ARG 350 ALA 351 LEU 352 GLY 353 ALA 354 THR 355 TYR 356 PHE 357 ASN 358 GLY 359 LEU 360 TYR 361 GLU 362 ALA 363 ASN 364 MET 365 ARG 366 ALA 367 ALA 368 GLY 369 LYS 370 THR 371 PRO 372 ASP 373 PHE 374 GLY 375 ILE 376 LYS 377 ALA 378 LYS 379 THR 380 VAL 381 GLY 382 THR 383 LYS 384 GLU 385

Ligands

Unit 3	MN 387
Unit 4	MN 387 CS2 388