3D9K - Sequence, Chains, Asymmetric and Biological Units

• Title: SNAPSHOTS OF THE RNA PROCESSING FACTOR SCAF8 BOUND TO DIFFER PHOSPHORYLATED FORMS OF THE CARBOXY-TERMINAL DOMAIN OF RNA- II
• Keywords: SCAF8, RNA POLYMERASE II CTD INTERACTING DOMAIN, ARM REPEATS PHOSPHO-CTD, PHOSPHOPROTEIN, RNA-BINDING, TRANSCRIPTION
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3D9K	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	RNA-BINDING PROTEIN 16	A	137	1116	0
2	Protein	RNA-BINDING PROTEIN 16	B	141	1153	0
3	Protein	CTD-PEPTIDE	Y	6	39	10
4	Protein	CTD-PEPTIDE	Z	9	51	30
5	Ligand	RNA-BINDING PROTEIN 16	A	5	0	25
6	Ligand	RNA-BINDING PROTEIN 16	B	3	0	15
7	Ligand	CTD-PEPTIDE	Z	1	0	5
8	Water			83	0	83
total				385	2359	168

Proteins

Unit 1	GLU 2 ALA 3 VAL 4 LYS 5 THR 6 PHE 7 ASN 8 SER 9 GLU 10 LEU 11 TYR 12 SER 13 LEU 14 ASN 15 ASP 16 TYR 17 LYS 18 PRO 19 PRO 20 ILE 21 SER 22 LYS 23 ALA 24 LYS 25 MET 26 THR 27 GLN 28 ILE 29 THR 30 LYS 31 ALA 32 ALA 33 ILE 34 LYS 35 ALA 36 ILE 37 LYS 38 PHE 39 TYR 40 LYS 41 HIS 42 VAL 43 VAL 44 GLN 45 SER 46 VAL 47 GLU 48 LYS 49 PHE 50 ILE 51 GLN 52 LYS 53 CYS 54 LYS 55 PRO 56 GLU 57 TYR 58 LYS 59 VAL 60 PRO 61 GLY 62 LEU 63 TYR 64 VAL 65 ILE 66 ASP 67 SER 68 ILE 69 VAL 70 ARG 71 GLN 72 SER 73 ARG 74 HIS 75 GLN 76 PHE 77 GLY 78 GLN 79 GLU 80 LYS 81 ASP 82 VAL 83 PHE 84 ALA 85 PRO 86 ARG 87 PHE 88 SER 89 ASN 90 ASN 91 ILE 92 ILE 93 SER 94 THR 95 PHE 96 GLN 97 ASN 98 LEU 99 TYR 100 ARG 101 CYS 102 PRO 103 GLY 104 ASP 105 ASP 106 LYS 107 SER 108 LYS 109 ILE 110 VAL 111 ARG 112 VAL 113 LEU 114 ASN 115 LEU 116 TRP 117 GLN 118 LYS 119 ASN 120 ASN 121 VAL 122 PHE 123 LYS 124 SER 125 GLU 126 ILE 127 ILE 128 GLN 129 PRO 130 LEU 131 LEU 132 ASP 133 MET 134 ALA 135 ALA 136 ALA 137 LEU 138
Unit 2	MET 1 GLU 2 ALA 3 VAL 4 LYS 5 THR 6 PHE 7 ASN 8 SER 9 GLU 10 LEU 11 TYR 12 SER 13 LEU 14 ASN 15 ASP 16 TYR 17 LYS 18 PRO 19 PRO 20 ILE 21 SER 22 LYS 23 ALA 24 LYS 25 MET 26 THR 27 GLN 28 ILE 29 THR 30 LYS 31 ALA 32 ALA 33 ILE 34 LYS 35 ALA 36 ILE 37 LYS 38 PHE 39 TYR 40 LYS 41 HIS 42 VAL 43 VAL 44 GLN 45 SER 46 VAL 47 GLU 48 LYS 49 PHE 50 ILE 51 GLN 52 LYS 53 CYS 54 LYS 55 PRO 56 GLU 57 TYR 58 LYS 59 VAL 60 PRO 61 GLY 62 LEU 63 TYR 64 VAL 65 ILE 66 ASP 67 SER 68 ILE 69 VAL 70 ARG 71 GLN 72 SER 73 ARG 74 HIS 75 GLN 76 PHE 77 GLY 78 GLN 79 GLU 80 LYS 81 ASP 82 VAL 83 PHE 84 ALA 85 PRO 86 ARG 87 PHE 88 SER 89 ASN 90 ASN 91 ILE 92 ILE 93 SER 94 THR 95 PHE 96 GLN 97 ASN 98 LEU 99 TYR 100 ARG 101 CYS 102 PRO 103 GLY 104 ASP 105 ASP 106 LYS 107 SER 108 LYS 109 ILE 110 VAL 111 ARG 112 VAL 113 LEU 114 ASN 115 LEU 116 TRP 117 GLN 118 LYS 119 ASN 120 ASN 121 VAL 122 PHE 123 LYS 124 SER 125 GLU 126 ILE 127 ILE 128 GLN 129 PRO 130 LEU 131 LEU 132 ASP 133 MET 134 ALA 135 ALA 136 ALA 137 LEU 138 GLU 139 HIS 140 HIS 141
Unit 3	PRO -1 SER 0 TYR 1 SEP 2 PRO 3 THR 4
Unit 4	TYR 1 SEP 2 PRO 3 THR 4 SEP 5 PRO 6 SER 7 TYR 8 SEP 9

Ligands

Unit 5	SO4 1001 SO4 1003 SO4 1004 SO4 1008 SO4 1010
Unit 6	SO4 1002 SO4 1007 SO4 1012
Unit 7	SO4 1006