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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A T325I/T329I/H333Y/H335Q MUTANT OF THR ACTIVATABLE FIBRINOLYSIS INHIBITOR (TAFI-IIYQ)
Keywords ALPHA/BETA HYDROLASE FOLD, CARBOXYPEPTIDASE, GLYCOPROTEIN, M BINDING, METALLOPROTEASE, PROTEASE, SECRETED, ZYMOGEN, HYDR
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3D68     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CARBOXYPEPTIDASE B2  A 401 3249 0
2  Protein   CARBOXYPEPTIDASE B2  B 401 3249 0
3  Protein   CARBOXYPEPTIDASE B2  C 401 3249 0
4  Protein   CARBOXYPEPTIDASE B2  A 6 0 69
5  Protein   CARBOXYPEPTIDASE B2  B 6 0 69
6  Protein   CARBOXYPEPTIDASE B2  C 5 0 55
total       1220 9747 193
Proteins
Unit 1 ALA1 GLN2 SER3 GLY4 GLN5 VAL6 LEU7 ALA8 ALA9 LEU10 PRO11 ARG12 THR13 SER14 ARG15 GLN16 VAL17 GLN18 VAL19 LEU20 GLN21 ASN22 LEU23 THR24 THR25 THR26 TYR27 GLU28 ILE29 VAL30 LEU31 TRP32 GLN33 PRO34 VAL35 THR36 ALA37 ASP38 LEU39 ILE40 VAL41 LYS42 LYS43 LYS44 GLN45 VAL46 HIS47 PHE48 PHE49 VAL50 ASN51 ALA52 SER53 ASP54 VAL55 ASP56 ASN57 VAL58 LYS59 ALA60 HIS61 LEU62 ASN63 VAL64 SER65 GLY66 ILE67 PRO68 CYS69 SER70 VAL71 LEU72 LEU73 ALA74 ASP75 VAL76 GLU77 ASP78 LEU79 ILE80 GLN81 GLN82 GLN83 ILE84 SER85 ASN86 ASP87 THR88 VAL89 SER90 PRO91 ARG92 ALA93 SER94 ALA95 SER96 TYR97 TYR98 GLU99 GLN100 TYR101 HIS102 SER103 LEU104 ASN105 GLU106 ILE107 TYR108 SER109 TRP110 ILE111 GLU112 PHE113 ILE114 THR115 GLU116 ARG117 HIS118 PRO119 ASP120 MET121 LEU122 THR123 LYS124 ILE125 HIS126 ILE127 GLY128 SER129 SER130 PHE131 GLU132 LYS133 TYR134 PRO135 LEU136 TYR137 VAL138 LEU139 LYS140 VAL141 SER142 GLY143 LYS144 GLU145 GLN146 THR147 ALA148 LYS149 ASN150 ALA151 ILE152 TRP153 ILE154 ASP155 CYS156 GLY157 ILE158 HIS159 ALA160 ARG161 GLU162 TRP163 ILE164 SER165 PRO166 ALA167 PHE168 CYS169 LEU170 TRP171 PHE172 ILE173 GLY174 HIS175 ILE176 THR177 GLN178 PHE179 TYR180 GLY181 ILE182 ILE183 GLY184 GLN185 TYR186 THR187 ASN188 LEU189 LEU190 ARG191 LEU192 VAL193 ASP194 PHE195 TYR196 VAL197 MET198 PRO199 VAL200 VAL201 ASN202 VAL203 ASP204 GLY205 TYR206 ASP207 TYR208 SER209 TRP210 LYS211 LYS212 ASN213 ARG214 MET215 TRP216 ARG217 LYS218 ASN219 ARG220 SER221 PHE222 TYR223 ALA224 ASN225 ASN226 HIS227 CYS228 ILE229 GLY230 THR231 ASP232 LEU233 ASN234 ARG235 ASN236 PHE237 ALA238 SER239 LYS240 HIS241 TRP242 CYS243 GLU244 GLU245 GLY246 ALA247 SER248 SER249 SER250 SER251 CYS252 SER253 GLU254 THR255 TYR256 CYS257 GLY258 LEU259 TYR260 PRO261 GLU262 SER263 GLU264 PRO265 GLU266 VAL267 LYS268 ALA269 VAL270 ALA271 SER272 PHE273 LEU274 ARG275 ARG276 ASN277 ILE278 ASN279 GLN280 ILE281 LYS282 ALA283 TYR284 ILE285 SER286 MET287 HIS288 SER289 TYR290 SER291 GLN292 HIS293 ILE294 VAL295 PHE296 PRO297 TYR298 SER299 TYR300 THR301 ARG302 SER303 LYS304 SER305 LYS306 ASP307 HIS308 GLU309 GLU310 LEU311 SER312 LEU313 VAL314 ALA315 SER316 GLU317 ALA318 VAL319 ARG320 ALA321 ILE322 GLU323 LYS324 ILE325 SER326 LYS327 ASN328 ILE329 ARG330 TYR331 THR332 TYR333 GLY334 GLN335 GLY336 SER337 GLU338 THR339 LEU340 TYR341 LEU342 ALA343 PRO344 GLY345 GLY346 GLY347 ASP348 ASP349 TRP350 ILE351 TYR352 ASP353 LEU354 GLY355 ILE356 LYS357 TYR358 SER359 PHE360 THR361 ILE362 GLU363 LEU364 ARG365 ASP366 THR367 GLY368 THR369 TYR370 GLY371 PHE372 LEU373 LEU374 PRO375 GLU376 ARG377 TYR378 ILE379 LYS380 PRO381 THR382 CYS383 ARG384 GLU385 ALA386 PHE387 ALA388 ALA389 VAL390 SER391 LYS392 ILE393 ALA394 TRP395 HIS396 VAL397 ILE398 ARG399 ASN400 VAL401
Unit 2 ALA1 GLN2 SER3 GLY4 GLN5 VAL6 LEU7 ALA8 ALA9 LEU10 PRO11 ARG12 THR13 SER14 ARG15 GLN16 VAL17 GLN18 VAL19 LEU20 GLN21 ASN22 LEU23 THR24 THR25 THR26 TYR27 GLU28 ILE29 VAL30 LEU31 TRP32 GLN33 PRO34 VAL35 THR36 ALA37 ASP38 LEU39 ILE40 VAL41 LYS42 LYS43 LYS44 GLN45 VAL46 HIS47 PHE48 PHE49 VAL50 ASN51 ALA52 SER53 ASP54 VAL55 ASP56 ASN57 VAL58 LYS59 ALA60 HIS61 LEU62 ASN63 VAL64 SER65 GLY66 ILE67 PRO68 CYS69 SER70 VAL71 LEU72 LEU73 ALA74 ASP75 VAL76 GLU77 ASP78 LEU79 ILE80 GLN81 GLN82 GLN83 ILE84 SER85 ASN86 ASP87 THR88 VAL89 SER90 PRO91 ARG92 ALA93 SER94 ALA95 SER96 TYR97 TYR98 GLU99 GLN100 TYR101 HIS102 SER103 LEU104 ASN105 GLU106 ILE107 TYR108 SER109 TRP110 ILE111 GLU112 PHE113 ILE114 THR115 GLU116 ARG117 HIS118 PRO119 ASP120 MET121 LEU122 THR123 LYS124 ILE125 HIS126 ILE127 GLY128 SER129 SER130 PHE131 GLU132 LYS133 TYR134 PRO135 LEU136 TYR137 VAL138 LEU139 LYS140 VAL141 SER142 GLY143 LYS144 GLU145 GLN146 THR147 ALA148 LYS149 ASN150 ALA151 ILE152 TRP153 ILE154 ASP155 CYS156 GLY157 ILE158 HIS159 ALA160 ARG161 GLU162 TRP163 ILE164 SER165 PRO166 ALA167 PHE168 CYS169 LEU170 TRP171 PHE172 ILE173 GLY174 HIS175 ILE176 THR177 GLN178 PHE179 TYR180 GLY181 ILE182 ILE183 GLY184 GLN185 TYR186 THR187 ASN188 LEU189 LEU190 ARG191 LEU192 VAL193 ASP194 PHE195 TYR196 VAL197 MET198 PRO199 VAL200 VAL201 ASN202 VAL203 ASP204 GLY205 TYR206 ASP207 TYR208 SER209 TRP210 LYS211 LYS212 ASN213 ARG214 MET215 TRP216 ARG217 LYS218 ASN219 ARG220 SER221 PHE222 TYR223 ALA224 ASN225 ASN226 HIS227 CYS228 ILE229 GLY230 THR231 ASP232 LEU233 ASN234 ARG235 ASN236 PHE237 ALA238 SER239 LYS240 HIS241 TRP242 CYS243 GLU244 GLU245 GLY246 ALA247 SER248 SER249 SER250 SER251 CYS252 SER253 GLU254 THR255 TYR256 CYS257 GLY258 LEU259 TYR260 PRO261 GLU262 SER263 GLU264 PRO265 GLU266 VAL267 LYS268 ALA269 VAL270 ALA271 SER272 PHE273 LEU274 ARG275 ARG276 ASN277 ILE278 ASN279 GLN280 ILE281 LYS282 ALA283 TYR284 ILE285 SER286 MET287 HIS288 SER289 TYR290 SER291 GLN292 HIS293 ILE294 VAL295 PHE296 PRO297 TYR298 SER299 TYR300 THR301 ARG302 SER303 LYS304 SER305 LYS306 ASP307 HIS308 GLU309 GLU310 LEU311 SER312 LEU313 VAL314 ALA315 SER316 GLU317 ALA318 VAL319 ARG320 ALA321 ILE322 GLU323 LYS324 ILE325 SER326 LYS327 ASN328 ILE329 ARG330 TYR331 THR332 TYR333 GLY334 GLN335 GLY336 SER337 GLU338 THR339 LEU340 TYR341 LEU342 ALA343 PRO344 GLY345 GLY346 GLY347 ASP348 ASP349 TRP350 ILE351 TYR352 ASP353 LEU354 GLY355 ILE356 LYS357 TYR358 SER359 PHE360 THR361 ILE362 GLU363 LEU364 ARG365 ASP366 THR367 GLY368 THR369 TYR370 GLY371 PHE372 LEU373 LEU374 PRO375 GLU376 ARG377 TYR378 ILE379 LYS380 PRO381 THR382 CYS383 ARG384 GLU385 ALA386 PHE387 ALA388 ALA389 VAL390 SER391 LYS392 ILE393 ALA394 TRP395 HIS396 VAL397 ILE398 ARG399 ASN400 VAL401
Unit 3 ALA1 GLN2 SER3 GLY4 GLN5 VAL6 LEU7 ALA8 ALA9 LEU10 PRO11 ARG12 THR13 SER14 ARG15 GLN16 VAL17 GLN18 VAL19 LEU20 GLN21 ASN22 LEU23 THR24 THR25 THR26 TYR27 GLU28 ILE29 VAL30 LEU31 TRP32 GLN33 PRO34 VAL35 THR36 ALA37 ASP38 LEU39 ILE40 VAL41 LYS42 LYS43 LYS44 GLN45 VAL46 HIS47 PHE48 PHE49 VAL50 ASN51 ALA52 SER53 ASP54 VAL55 ASP56 ASN57 VAL58 LYS59 ALA60 HIS61 LEU62 ASN63 VAL64 SER65 GLY66 ILE67 PRO68 CYS69 SER70 VAL71 LEU72 LEU73 ALA74 ASP75 VAL76 GLU77 ASP78 LEU79 ILE80 GLN81 GLN82 GLN83 ILE84 SER85 ASN86 ASP87 THR88 VAL89 SER90 PRO91 ARG92 ALA93 SER94 ALA95 SER96 TYR97 TYR98 GLU99 GLN100 TYR101 HIS102 SER103 LEU104 ASN105 GLU106 ILE107 TYR108 SER109 TRP110 ILE111 GLU112 PHE113 ILE114 THR115 GLU116 ARG117 HIS118 PRO119 ASP120 MET121 LEU122 THR123 LYS124 ILE125 HIS126 ILE127 GLY128 SER129 SER130 PHE131 GLU132 LYS133 TYR134 PRO135 LEU136 TYR137 VAL138 LEU139 LYS140 VAL141 SER142 GLY143 LYS144 GLU145 GLN146 THR147 ALA148 LYS149 ASN150 ALA151 ILE152 TRP153 ILE154 ASP155 CYS156 GLY157 ILE158 HIS159 ALA160 ARG161 GLU162 TRP163 ILE164 SER165 PRO166 ALA167 PHE168 CYS169 LEU170 TRP171 PHE172 ILE173 GLY174 HIS175 ILE176 THR177 GLN178 PHE179 TYR180 GLY181 ILE182 ILE183 GLY184 GLN185 TYR186 THR187 ASN188 LEU189 LEU190 ARG191 LEU192 VAL193 ASP194 PHE195 TYR196 VAL197 MET198 PRO199 VAL200 VAL201 ASN202 VAL203 ASP204 GLY205 TYR206 ASP207 TYR208 SER209 TRP210 LYS211 LYS212 ASN213 ARG214 MET215 TRP216 ARG217 LYS218 ASN219 ARG220 SER221 PHE222 TYR223 ALA224 ASN225 ASN226 HIS227 CYS228 ILE229 GLY230 THR231 ASP232 LEU233 ASN234 ARG235 ASN236 PHE237 ALA238 SER239 LYS240 HIS241 TRP242 CYS243 GLU244 GLU245 GLY246 ALA247 SER248 SER249 SER250 SER251 CYS252 SER253 GLU254 THR255 TYR256 CYS257 GLY258 LEU259 TYR260 PRO261 GLU262 SER263 GLU264 PRO265 GLU266 VAL267 LYS268 ALA269 VAL270 ALA271 SER272 PHE273 LEU274 ARG275 ARG276 ASN277 ILE278 ASN279 GLN280 ILE281 LYS282 ALA283 TYR284 ILE285 SER286 MET287 HIS288 SER289 TYR290 SER291 GLN292 HIS293 ILE294 VAL295 PHE296 PRO297 TYR298 SER299 TYR300 THR301 ARG302 SER303 LYS304 SER305 LYS306 ASP307 HIS308 GLU309 GLU310 LEU311 SER312 LEU313 VAL314 ALA315 SER316 GLU317 ALA318 VAL319 ARG320 ALA321 ILE322 GLU323 LYS324 ILE325 SER326 LYS327 ASN328 ILE329 ARG330 TYR331 THR332 TYR333 GLY334 GLN335 GLY336 SER337 GLU338 THR339 LEU340 TYR341 LEU342 ALA343 PRO344 GLY345 GLY346 GLY347 ASP348 ASP349 TRP350 ILE351 TYR352 ASP353 LEU354 GLY355 ILE356 LYS357 TYR358 SER359 PHE360 THR361 ILE362 GLU363 LEU364 ARG365 ASP366 THR367 GLY368 THR369 TYR370 GLY371 PHE372 LEU373 LEU374 PRO375 GLU376 ARG377 TYR378 ILE379 LYS380 PRO381 THR382 CYS383 ARG384 GLU385 ALA386 PHE387 ALA388 ALA389 VAL390 SER391 LYS392 ILE393 ALA394 TRP395 HIS396 VAL397 ILE398 ARG399 ASN400 VAL401
Unit 4 ZN501 NAG601 NAG602 NAG603 NAG604 ARG650
Unit 5 ZN501 NAG601 NAG602 NAG603 NAG604 ARG650
Unit 6 ZN501 NAG601 NAG602 NAG604 ARG650
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany