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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE UNBOUND LYSINE RIBOSWITCH
Keywords RNA, RIBOSWITCH
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3D0X     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 161 3479 0
2 Water     60 0 60
total       221 3479 60

Nucleic acids
Unit 1 G1 G2 A3 C4 G5 G6 A7 G8 G9 C10 G11 C12 G13 C14 C15 C16 G17 A18 G19 A20 U21 G22 A23 G24 U25 A26 G27 G28 C29 U30 G31 U32 C33 C34 C35 A36 U37 C38 A39 G40 G41 G42 G43 A44 G45 G46 A47 A48 U49 C50 G51 G52 G53 G54 A55 C56 G57 G58 C59 U60 G61 A62 A63 A64 G65 G66 C67 G68 A69 G70 G71 G72 C73 G74 C75 C76 G77 A78 A79 G80 C81 G82 A83 G84 C85 A86 G87 A88 G89 U90 U91 C92 C93 U94 C95 C96 C97 G98 C99 U100 C101 U102 G103 C104 U105 U106 G107 G108 C109 U110 G111 G112 G113 G114 G115 U116 G117 A118 G119 G120 G121 G122 A123 A124 U125 A126 C127 C128 C129 U130 U131 A132 C133 C134 A135 C136 U137 G138 U139 C140 G141 C142 G143 A144 A145 A146 G147 C148 G149 G150 A151 G152 A153 G154 C155 C156 G157 U158 C159 C160 A161

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany