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Sequence, Chains, Asymmetric and Biological Units

Title AMINOACYL-TRNA SYNTHETASE RIBOZYME
Keywords ARS RIBOZYME CATALYTIC RNA, RNA-RNA BINDING COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3CUN     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    C 92 1941 32
2  RNA    D 92 1941 32
3  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A  A 91 679 29
4  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A  B 91 675 24
5  Ligand   RNA (92-MER)  C 6 0 6
6  Ligand   RNA (92-MER)  D 4 0 4
7  Ligand   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A  B 1 0 1
total       377 5236 128
Proteins
Unit 3 ARG302 PRO303 ASN304 HIS305 THR306 ILE307 TYR308 ILE309 ASN310 ASN311 LEU312 ASN313 GLU314 LYS315 ILE316 LYS317 LYS318 ASP319 GLU320 LEU321 LYS322 LYS323 SER324 LEU325 HIS326 ALA327 ILE328 PHE329 SER330 ARG331 PHE332 GLY333 GLN334 ILE335 LEU336 ASP337 ILE338 LEU339 VAL340 SER341 ARG342 SER343 LEU344 LYS345 MSE346 ARG347 GLY348 GLN349 ALA350 PHE351 VAL352 ILE353 PHE354 LYS355 GLU356 VAL357 SER358 SER359 ALA360 THR361 ASN362 ALA363 LEU364 ARG365 SER366 MSE367 GLN368 GLY369 PHE370 PRO371 PHE372 TYR373 ASP374 LYS375 PRO376 MSE377 ARG378 ILE379 GLN380 TYR381 ALA382 LYS383 THR384 ASP385 SER386 ASP387 ILE388 ILE389 ALA390 LYS391 MSE392
Unit 4 THR401 ARG402 PRO403 ASN404 HIS405 THR406 ILE407 TYR408 ILE409 ASN410 ASN411 LEU412 ASN413 GLU414 LYS415 ILE416 LYS417 LYS418 ASP419 GLU420 LEU421 LYS422 LYS423 SER424 LEU425 HIS426 ALA427 ILE428 PHE429 SER430 ARG431 PHE432 GLY433 GLN434 ILE435 LEU436 ASP437 ILE438 LEU439 VAL440 SER441 ARG442 SER443 LEU444 LYS445 MSE446 ARG447 GLY448 GLN449 ALA450 PHE451 VAL452 ILE453 PHE454 LYS455 GLU456 VAL457 SER458 SER459 ALA460 THR461 ASN462 ALA463 LEU464 ARG465 SER466 MSE467 GLN468 GLY469 PHE470 PRO471 PHE472 TYR473 ASP474 LYS475 PRO476 MSE477 ARG478 ILE479 GLN480 TYR481 ALA482 LYS483 THR484 ASP485 SER486 ASP487 ILE488 ILE489 ALA490 LYS491
Nucleic acids
Unit 1 GTP1 G2 A3 U4 G5 G6 C7 G8 A9 A10 A11 G12 C13 C14 A15 U16 U17 U18 C19 C20 G21 C22 A23 G24 G25 C26 C27 C28 C29 A30 U31 U32 G33 C34 A35 C36 U37 C38 C39 G40 G41 G42 G43 U44 A45 U46 U47 G48 G49 C50 G51 U52 U53 A54 G55 G56 U57 G58 G59 U60 G61 G62 U63 A64 C65 G66 A67 G68 G69 U70 U71 C72 G73 A74 A75 U76 C77 C78 U79 C80 G81 U82 A83 C84 C85 G86 C87 A88 G89 C90 C91 A92
Unit 2 GTP101 G102 A103 U104 G105 G106 C107 G108 A109 A110 A111 G112 C113 C114 A115 U116 U117 U118 C119 C120 G121 C122 A123 G124 G125 C126 C127 C128 C129 A130 U131 U132 G133 C134 A135 C136 U137 C138 C139 G140 G141 G142 G143 U144 A145 U146 U147 G148 G149 C150 G151 U152 U153 A154 G155 G156 U157 G158 G159 U160 G161 G162 U163 A164 C165 G166 A167 G168 G169 U170 U171 C172 G173 A174 A175 U176 C177 C178 U179 C180 G181 U182 A183 C184 C185 G186 C187 A188 G189 C190 C191 A192
Ligands
Unit 5 MG501 MG503 MG506 MG507 MG510 K511
Unit 6 MG502 MG504 MG512 MG513
Unit 7 CO514
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany