3CPJ - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF YPT31 IN COMPLEX WITH YEAST RAB-GDI
• Keywords: RAB GTPASE, PRENYLATION, VESICULAR TRANSPORT, ACETYLATION, GOLGI APPARATUS, GTP-BINDING, LIPOPROTEIN, MEMBRANE, NUCLEOTIDE-BINDING, PROTEIN TRANSPORT, CYTOPLASM, GTPASE ACTIVATION, PHOSPHOPROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3CPJ	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	RAB GDP-DISSOCIATION INHIBITOR	G	438	3480	0
2	Protein	GTP-BINDING PROTEIN YPT31/YPT8	B	164	1269	0
3	Ligand	RAB GDP-DISSOCIATION INHIBITOR	G	2	0	2
4	Ligand	GTP-BINDING PROTEIN YPT31/YPT8	B	2	0	29
5	Water			452	0	452
total				1058	4749	483

Proteins

Unit 1

ILE 6 ASP 7 THR 8 ASP 9 TYR 10 ASP 11 VAL 12 ILE 13 VAL 14 LEU 15 GLY 16 THR 17 GLY 18 ILE 19 THR 20 GLU 21 CYS 22 ILE 23 LEU 24 SER 25 GLY 26 LEU 27 LEU 28 SER 29 VAL 30 ASP 31 GLY 32 LYS 33 LYS 34 VAL 35 LEU 36 HIS 37 ILE 38 ASP 39 LYS 40 GLN 41 ASP 42 HIS 43 TYR 44 GLY 45 GLY 46 GLU 47 ALA 48 ALA 49 SER 50 VAL 51 THR 52 LEU 53 SER 54 GLN 55 LEU 56 TYR 57 GLU 58 LYS 59 PHE 60 LYS 61 GLN 62 ASN 63 PRO 64 ILE 65 SER 66 LYS 67 GLU 68 GLU 69 ARG 70 GLU 71 SER 72 LYS 73 PHE 74 GLY 75 LYS 76 ASP 77 ARG 78 ASP 79 TRP 80 ASN 81 VAL 82 ASP 83 LEU 84 ILE 85 PRO 86 LYS 87 PHE 88 LEU 89 MET 90 ALA 91 ASN 92 GLY 93 GLU 94 LEU 95 THR 96 ASN 97 ILE 98 LEU 99 ILE 100 HIS 101 THR 102 ASP 103 VAL 104 THR 105 ARG 106 TYR 107 VAL 108 ASP 109 PHE 110 LYS 111 GLN 112 VAL 113 SER 114 GLY 115 SER 116 TYR 117 VAL 118 PHE 119 LYS 120 GLN 121 GLY 122 LYS 123 ILE 124 TYR 125 LYS 126 VAL 127 PRO 128 ALA 129 ASN 130 GLU 131 ILE 132 GLU 133 ALA 134 ILE 135 SER 136 SER 137 PRO 138 LEU 139 MET 140 GLY 141 ILE 142 PHE 143 GLU 144 LYS 145 ARG 146 ARG 147 MET 148 LYS 149 LYS 150 PHE 151 LEU 152 GLU 153 TRP 154 ILE 155 SER 156 SER 157 TYR 158 LYS 159 GLU 160 ASP 161 ASP 162 LEU 163 SER 164 THR 165 HIS 166 GLN 167 GLY 168 LEU 169 ASP 170 LEU 171 ASP 172 LYS 173 ASN 174 THR 175 MET 176 ASP 177 GLU 178 VAL 179 TYR 180 TYR 181 LYS 182 PHE 183 GLY 184 LEU 185 GLY 186 ASN 187 SER 188 THR 189 LYS 190 GLU 191 PHE 192 ILE 193 GLY 194 HIS 195 ALA 196 MET 197 ALA 198 LEU 199 TRP 200 THR 201 ASN 202 ASP 203 ASP 204 TYR 205 LEU 206 GLN 207 GLN 208 PRO 209 ALA 210 ARG 211 PRO 212 SER 213 PHE 214 GLU 215 ARG 216 ILE 217 LEU 218 LEU 219 TYR 220 CYS 221 GLN 222 SER 223 VAL 224 ALA 225 ARG 226 TYR 227 GLY 228 LYS 229 SER 230 PRO 231 TYR 232 LEU 233 TYR 234 PRO 235 MET 236 TYR 237 GLY 238 LEU 239 GLY 240 GLU 241 LEU 242 PRO 243 GLN 244 GLY 245 PHE 246 ALA 247 ARG 248 LEU 249 SER 250 ALA 251 ILE 252 TYR 253 GLY 254 GLY 255 THR 256 TYR 257 MET 258 LEU 259 ASP 260 THR 261 PRO 262 ILE 263 ASP 264 GLU 265 VAL 266 LEU 267 TYR 268 LYS 269 LYS 270 ASP 271 THR 272 GLY 273 LYS 274 PHE 275 GLU 276 GLY 277 VAL 278 LYS 279 THR 280 LYS 281 LEU 282 GLY 283 THR 284 PHE 285 LYS 286 ALA 287 PRO 288 LEU 289 VAL 290 ILE 291 ALA 292 ASP 293 PRO 294 THR 295 TYR 296 PHE 297 PRO 298 GLU 299 LYS 300 CYS 301 LYS 302 SER 303 THR 304 GLY 305 GLN 306 ARG 307 VAL 308 ILE 309 ARG 310 ALA 311 ILE 312 CYS 313 ILE 314 LEU 315 ASN 316 HIS 317 PRO 318 VAL 319 PRO 320 ASN 321 THR 322 SER 323 ASN 324 ALA 325 ASP 326 SER 327 LEU 328 GLN 329 ILE 330 ILE 331 ILE 332 PRO 333 GLN 334 SER 335 GLN 336 LEU 337 GLY 338 ARG 339 LYS 340 SER 341 ASP 342 ILE 343 TYR 344 VAL 345 ALA 346 ILE 347 VAL 348 SER 349 ASP 350 ALA 351 HIS 352 ASN 353 VAL 354 CYS 355 SER 356 LYS 357 GLY 358 HIS 359 TYR 360 LEU 361 ALA 362 ILE 363 ILE 364 SER 365 THR 366 ILE 367 ILE 368 GLU 369 THR 370 ASP 371 LYS 372 PRO 373 HIS 374 ILE 375 GLU 376 LEU 377 GLU 378 PRO 379 ALA 380 PHE 381 LYS 382 LEU 383 LEU 384 GLY 385 PRO 386 ILE 387 GLU 388 GLU 389 LYS 390 PHE 391 MET 392 GLY 393 ILE 394 ALA 395 GLU 396 LEU 397 PHE 398 GLU 399 PRO 400 ARG 401 GLU 402 ASP 403 GLY 404 SER 405 LYS 406 ASP 407 ASN 408 ILE 409 TYR 410 LEU 411 SER 412 ARG 413 SER 414 TYR 415 ASP 416 ALA 417 SER 418 SER 419 HIS 420 PHE 421 GLU 422 SER 423 MET 424 THR 425 ASP 426 ASP 427 VAL 428 LYS 429 ASP 430 ILE 431 TYR 432 PHE 433 ARG 434 VAL 435 THR 436 GLY 437 HIS 438 PRO 439 LEU 440 VAL 441 LEU 442 LYS 443

Unit 2

TYR 10 ASP 11 LEU 12 LEU 13 PHE 14 LYS 15 ILE 16 VAL 17 LEU 18 ILE 19 GLY 20 ASP 21 SER 22 GLY 23 VAL 24 GLY 25 LYS 26 SER 27 ASN 28 LEU 29 LEU 30 SER 31 ARG 32 PHE 33 THR 34 LYS 35 ASN 36 GLU 37 PHE 38 ASN 39 MET 40 GLY 47 VAL 48 GLU 49 PHE 50 ALA 51 THR 52 ARG 53 THR 54 LEU 55 GLU 56 ILE 57 GLU 58 GLY 59 LYS 60 ARG 61 ILE 62 LYS 63 ALA 64 GLN 65 ILE 66 TRP 67 ASP 68 THR 69 ALA 70 GLY 71 GLN 72 GLU 73 ARG 74 TYR 75 ARG 76 ALA 77 ILE 78 THR 79 SER 80 ALA 81 TYR 82 TYR 83 ARG 84 GLY 85 ALA 86 VAL 87 GLY 88 ALA 89 LEU 90 ILE 91 VAL 92 TYR 93 ASP 94 SER 96 LYS 97 SER 98 SER 99 SER 100 TYR 101 GLU 102 ASN 103 CYS 104 ASN 105 HIS 106 TRP 107 LEU 108 SER 109 GLU 110 LEU 111 ARG 112 GLU 113 ASN 114 ALA 115 ASP 116 VAL 119 ALA 120 VAL 121 GLY 122 LEU 123 ILE 124 GLY 125 ASN 126 LYS 127 SER 128 ASP 129 LEU 130 ALA 131 HIS 132 LEU 133 ARG 134 ALA 135 VAL 136 PRO 137 THR 138 GLU 139 GLU 140 SER 141 LYS 142 THR 143 PHE 144 ALA 145 GLN 146 GLU 147 ASN 148 GLN 149 LEU 150 LEU 151 PHE 152 THR 153 GLU 154 THR 155 SER 156 ALA 157 LEU 158 SER 160 GLU 161 ASN 162 VAL 163 ASP 164 LYS 165 ALA 166 PHE 167 GLU 168 GLU 169 LEU 170 ILE 171 ASN 172 THR 173 ILE 174 TYR 175 GLN 176 LYS 177 VAL 178 PRO 203 THR 204 ILE 205 SER 206 LEU 207

Ligands

Unit 3	CL 2001 CL 2002
Unit 4	GDP 1207 MG 1208