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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN FACTOR VIII
Keywords BLOOD CLOTTING, BLOOD COAGULATION, COFACTOR, FACTOR VIII, RE ACUTE PHASE, DISEASE MUTATION, GLYCOPROTEIN, HEMOPHILIA, ME BINDING, SECRETED, SULFATION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3CDZ     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   COAGULATION FACTOR VIII HEAVY CHAIN  A 630 5086 0
2  Protein   COAGULATION FACTOR VIII LIGHT CHAIN  B 631 5125 0
3  Ligand    C 2 0 28
4  Ligand    D 4 0 47
5  Ligand   COAGULATION FACTOR VIII HEAVY CHAIN  A 2 0 2
6  Ligand   COAGULATION FACTOR VIII LIGHT CHAIN  B 3 0 29
total       1272 10211 106
Proteins
Unit 1 ALA1 THR2 ARG3 ARG4 TYR5 TYR6 LEU7 GLY8 ALA9 VAL10 GLU11 LEU12 SER13 TRP14 ASP15 TYR16 VAL44 VAL45 TYR46 LYS47 LYS48 THR49 LEU50 PHE51 VAL52 GLU53 PHE54 THR55 ASP56 HIS57 LEU58 PHE59 ASN60 ILE61 ALA62 LYS63 PRO64 ARG65 PRO66 PRO67 TRP68 MET69 GLY70 LEU71 LEU72 GLY73 PRO74 THR75 ILE76 GLN77 ALA78 GLU79 VAL80 TYR81 ASP82 THR83 VAL84 VAL85 ILE86 THR87 LEU88 LYS89 ASN90 MET91 ALA92 SER93 HIS94 PRO95 VAL96 SER97 LEU98 HIS99 ALA100 VAL101 GLY102 VAL103 SER104 TYR105 TRP106 LYS107 ALA108 SER109 GLU110 GLY111 ALA112 GLU113 TYR114 ASP115 ASP116 GLN117 THR118 SER119 GLN120 ARG121 GLU122 LYS123 GLU124 ASP125 ASP126 LYS127 VAL128 PHE129 PRO130 GLY131 GLY132 SER133 HIS134 THR135 TYR136 VAL137 TRP138 GLN139 VAL140 LEU141 LYS142 GLU143 ASN144 GLY145 PRO146 MET147 ALA148 SER149 ASP150 PRO151 LEU152 CYS153 LEU154 THR155 TYR156 SER157 TYR158 LEU159 SER160 HIS161 VAL162 ASP163 LEU164 VAL165 LYS166 ASP167 LEU168 ASN169 SER170 GLY171 LEU172 ILE173 GLY174 ALA175 LEU176 LEU177 VAL178 CYS179 ARG180 GLU181 GLY182 SER183 LEU184 ALA185 LYS186 GLU187 LYS188 THR189 GLN190 THR191 LEU192 HIS193 LYS194 PHE195 ILE196 LEU197 LEU198 PHE199 ALA200 VAL201 PHE202 ASP203 GLU204 GLY205 LYS206 SER207 TRP208 HIS209 SER210 SER224 ALA225 ARG226 ALA227 TRP228 PRO229 LYS230 MET231 HIS232 THR233 VAL234 ASN235 GLY236 TYR237 VAL238 ASN239 ARG240 SER241 LEU242 PRO243 GLY244 LEU245 ILE246 GLY247 CYS248 HIS249 ARG250 LYS251 SER252 VAL253 TYR254 TRP255 HIS256 VAL257 ILE258 GLY259 MET260 GLY261 THR262 THR263 PRO264 GLU265 VAL266 HIS267 SER268 ILE269 PHE270 LEU271 GLU272 GLY273 HIS274 THR275 PHE276 LEU277 VAL278 ARG279 ASN280 HIS281 ARG282 GLN283 ALA284 SER285 LEU286 GLU287 ILE288 SER289 PRO290 ILE291 THR292 PHE293 LEU294 THR295 ALA296 GLN297 THR298 LEU299 LEU300 MET301 ASP302 LEU303 GLY304 GLN305 PHE306 LEU307 LEU308 PHE309 CYS310 HIS311 ILE312 SER313 SER314 HIS315 GLN316 HIS317 ASP318 GLY319 MET320 GLU321 ALA322 TYR323 VAL324 LYS325 VAL326 ASP327 SER328 CYS329 PRO330 GLU331 GLU332 PRO333 LYS377 HIS378 PRO379 LYS380 THR381 TRP382 VAL383 HIS384 TYR385 ILE386 ALA387 ALA388 GLU389 GLU390 GLU391 ASP392 TRP393 ASP394 TYR395 ALA396 PRO397 LEU398 VAL399 LEU400 ALA401 PRO402 ASP403 ASP404 ARG405 SER406 TYR407 LYS408 SER409 GLN410 TYR411 LEU412 ASN413 ASN414 GLY415 PRO416 GLN417 ARG418 ILE419 GLY420 ARG421 LYS422 TYR423 LYS424 LYS425 VAL426 ARG427 PHE428 MET429 ALA430 TYR431 THR432 ASP433 GLU434 THR435 PHE436 LYS437 THR438 ARG439 GLU440 ALA441 ILE442 GLN443 HIS444 GLU445 SER446 GLY447 ILE448 LEU449 GLY450 PRO451 LEU452 LEU453 TYR454 GLY455 GLU456 VAL457 GLY458 ASP459 THR460 LEU461 LEU462 ILE463 ILE464 PHE465 LYS466 ASN467 GLN468 ALA469 SER470 ARG471 PRO472 TYR473 ASN474 ILE475 TYR476 PRO477 HIS478 GLY479 ILE480 THR481 ASP482 VAL483 ARG484 PRO485 LEU486 TYR487 SER488 ARG489 ARG490 LEU491 PRO492 LYS493 GLY494 VAL495 LYS496 HIS497 LEU498 LYS499 ASP500 PHE501 PRO502 ILE503 LEU504 PRO505 GLY506 GLU507 ILE508 PHE509 LYS510 TYR511 LYS512 TRP513 THR514 VAL515 THR516 VAL517 GLU518 ASP519 GLY520 PRO521 THR522 LYS523 SER524 ASP525 PRO526 ARG527 CYS528 LEU529 THR530 ARG531 TYR532 TYR533 SER534 SER535 PHE536 VAL537 ASN538 MET539 GLU540 ARG541 ASP542 LEU543 ALA544 SER545 GLY546 LEU547 ILE548 GLY549 PRO550 LEU551 LEU552 ILE553 CYS554 TYR555 LYS556 GLU557 SER558 VAL559 ASP560 GLN561 ARG562 GLY563 ASN564 GLN565 ILE566 MET567 SER568 ASP569 LYS570 ARG571 ASN572 VAL573 ILE574 LEU575 PHE576 SER577 VAL578 PHE579 ASP580 GLU581 ASN582 ARG583 SER584 TRP585 TYR586 LEU587 THR588 GLU589 ASN590 ILE591 GLN592 ARG593 PHE594 LEU595 PRO596 ASN597 PRO598 ALA599 GLY600 VAL601 GLN602 LEU603 GLU604 ASP605 PRO606 GLU607 PHE608 GLN609 ALA610 SER611 ASN612 ILE613 MET614 HIS615 SER616 ILE617 ASN618 GLY619 TYR620 VAL621 PHE622 ASP623 SER624 LEU625 GLN626 LEU627 SER628 VAL629 CYS630 LEU631 HIS632 GLU633 VAL634 ALA635 TYR636 TRP637 TYR638 ILE639 LEU640 SER641 ILE642 GLY643 ALA644 GLN645 THR646 ASP647 PHE648 LEU649 SER650 VAL651 PHE652 PHE653 SER654 GLY655 TYR656 THR657 PHE658 LYS659 HIS660 LYS661 MET662 VAL663 TYR664 GLU665 ASP666 THR667 LEU668 THR669 LEU670 PHE671 PRO672 PHE673 SER674 GLY675 GLU676 THR677 VAL678 PHE679 MET680 SER681 MET682 GLU683 ASN684 PRO685 GLY686 LEU687 TRP688 ILE689 LEU690 GLY691 CYS692 HIS693 ASN694 SER695 ASP696 PHE697 ARG698 ASN699 ARG700 GLY701 MET702 THR703 ALA704 LEU705 LEU706 LYS707 VAL708 SER709 SER710 CYS711 ASP712 LYS713
Unit 2 PHE1691 GLN1692 LYS1693 LYS1694 THR1695 ARG1696 HIS1697 TYR1698 PHE1699 ILE1700 ALA1701 ALA1702 VAL1703 GLU1704 ARG1705 LEU1706 TRP1707 ASP1708 TYR1709 GLY1710 MET1711 SER1712 SER1713 GLY1725 SER1726 VAL1727 PRO1728 GLN1729 PHE1730 LYS1731 LYS1732 VAL1733 VAL1734 PHE1735 GLN1736 GLU1737 PHE1738 THR1739 ASP1740 GLY1741 SER1742 PHE1743 THR1744 GLN1745 PRO1746 LEU1747 TYR1748 ARG1749 GLY1750 GLU1751 LEU1752 ASN1753 GLU1754 HIS1755 LEU1756 GLY1757 LEU1758 LEU1759 GLY1760 PRO1761 TYR1762 ILE1763 ARG1764 ALA1765 GLU1766 VAL1767 GLU1768 ASP1769 ASN1770 ILE1771 MET1772 VAL1773 THR1774 PHE1775 ARG1776 ASN1777 GLN1778 ALA1779 SER1780 ARG1781 PRO1782 TYR1783 SER1784 PHE1785 TYR1786 SER1787 SER1788 LEU1789 ILE1790 SER1791 TYR1792 GLU1793 GLU1794 ASP1795 GLN1796 ARG1797 GLN1798 GLY1799 ALA1800 GLU1801 PRO1802 ARG1803 LYS1804 ASN1805 PHE1806 VAL1807 LYS1808 PRO1809 ASN1810 GLU1811 THR1812 LYS1813 THR1814 TYR1815 PHE1816 TRP1817 LYS1818 VAL1819 GLN1820 HIS1821 HIS1822 MET1823 ALA1824 PRO1825 THR1826 LYS1827 ASP1828 GLU1829 PHE1830 ASP1831 CYS1832 LYS1833 ALA1834 TRP1835 ALA1836 TYR1837 PHE1838 SER1839 ASP1840 VAL1841 ASP1842 LEU1843 GLU1844 LYS1845 ASP1846 VAL1847 HIS1848 SER1849 GLY1850 LEU1851 ILE1852 GLY1853 PRO1854 LEU1855 LEU1856 VAL1857 CYS1858 HIS1859 THR1860 ASN1861 THR1862 LEU1863 ASN1864 PRO1865 ALA1866 HIS1867 GLY1868 ARG1869 GLN1870 VAL1871 THR1872 VAL1873 GLN1874 GLU1875 PHE1876 ALA1877 LEU1878 PHE1879 LEU1880 THR1881 ILE1882 PHE1883 ASP1884 GLU1885 THR1886 LYS1887 SER1888 TRP1889 TYR1890 PHE1891 THR1892 GLU1893 ASN1894 MET1895 GLU1896 ARG1897 ASN1898 CYS1899 ARG1900 ALA1901 PRO1902 CYS1903 ASN1904 ILE1905 GLN1906 MET1907 GLU1908 ASP1909 PRO1910 THR1911 PHE1912 LYS1913 GLU1914 ASN1915 TYR1916 ARG1917 PHE1918 HIS1919 ALA1920 ILE1921 ASN1922 GLY1923 TYR1924 ILE1925 MET1926 ASP1927 THR1928 LEU1929 PRO1930 GLY1931 LEU1932 VAL1933 MET1934 ALA1935 GLN1936 ASP1937 GLN1938 ARG1939 ILE1940 ARG1941 TRP1942 TYR1943 LEU1944 LEU1945 SER1946 MET1947 GLY1948 SER1949 ASN1950 GLU1951 ASN1952 ILE1953 HIS1954 SER1955 ILE1956 HIS1957 PHE1958 SER1959 GLY1960 HIS1961 VAL1962 PHE1963 THR1964 VAL1965 ARG1966 LYS1967 LYS1968 GLU1969 GLU1970 TYR1971 LYS1972 MET1973 ALA1974 LEU1975 TYR1976 ASN1977 LEU1978 TYR1979 PRO1980 GLY1981 VAL1982 PHE1983 GLU1984 THR1985 VAL1986 GLU1987 MET1988 LEU1989 PRO1990 SER1991 LYS1992 ALA1993 GLY1994 ILE1995 TRP1996 ARG1997 VAL1998 GLU1999 CYS2000 LEU2001 ILE2002 GLY2003 GLU2004 HIS2005 LEU2006 HIS2007 ALA2008 GLY2009 MET2010 SER2011 THR2012 LEU2013 PHE2014 LEU2015 VAL2016 TYR2017 SER2018 ASN2019 LYS2020 CYS2021 GLN2022 THR2023 PRO2024 LEU2025 GLY2026 MET2027 ALA2028 SER2029 GLY2030 HIS2031 ILE2032 ARG2033 ASP2034 PHE2035 GLN2036 ILE2037 THR2038 ALA2039 SER2040 GLY2041 GLN2042 TYR2043 GLY2044 GLN2045 TRP2046 ALA2047 PRO2048 LYS2049 LEU2050 ALA2051 ARG2052 LEU2053 HIS2054 TYR2055 SER2056 GLY2057 SER2058 ILE2059 ASN2060 ALA2061 TRP2062 SER2063 THR2064 LYS2065 GLU2066 PRO2067 PHE2068 SER2069 TRP2070 ILE2071 LYS2072 VAL2073 ASP2074 LEU2075 LEU2076 ALA2077 PRO2078 MET2079 ILE2080 ILE2081 HIS2082 GLY2083 ILE2084 LYS2085 THR2086 GLN2087 GLY2088 ALA2089 ARG2090 GLN2091 LYS2092 PHE2093 SER2094 SER2095 LEU2096 TYR2097 ILE2098 SER2099 GLN2100 PHE2101 ILE2102 ILE2103 MET2104 TYR2105 SER2106 LEU2107 ASP2108 GLY2109 LYS2110 LYS2111 TRP2112 GLN2113 THR2114 TYR2115 ARG2116 GLY2117 ASN2118 SER2119 THR2120 GLY2121 THR2122 LEU2123 MET2124 VAL2125 PHE2126 PHE2127 GLY2128 ASN2129 VAL2130 ASP2131 SER2132 SER2133 GLY2134 ILE2135 LYS2136 HIS2137 ASN2138 ILE2139 PHE2140 ASN2141 PRO2142 PRO2143 ILE2144 ILE2145 ALA2146 ARG2147 TYR2148 ILE2149 ARG2150 LEU2151 HIS2152 PRO2153 THR2154 HIS2155 TYR2156 SER2157 ILE2158 ARG2159 SER2160 THR2161 LEU2162 ARG2163 MET2164 GLU2165 LEU2166 MET2167 GLY2168 CYS2169 ASP2170 LEU2171 ASN2172 SER2173 CYS2174 SER2175 MET2176 PRO2177 LEU2178 GLY2179 MET2180 GLU2181 SER2182 LYS2183 ALA2184 ILE2185 SER2186 ASP2187 ALA2188 GLN2189 ILE2190 THR2191 ALA2192 SER2193 SER2194 TYR2195 PHE2196 THR2197 ASN2198 MET2199 PHE2200 ALA2201 THR2202 TRP2203 SER2204 PRO2205 SER2206 LYS2207 ALA2208 ARG2209 LEU2210 HIS2211 LEU2212 GLN2213 GLY2214 ARG2215 SER2216 ASN2217 ALA2218 TRP2219 ARG2220 PRO2221 GLN2222 VAL2223 ASN2224 ASN2225 PRO2226 LYS2227 GLU2228 TRP2229 LEU2230 GLN2231 VAL2232 ASP2233 PHE2234 GLN2235 LYS2236 THR2237 MET2238 LYS2239 VAL2240 THR2241 GLY2242 VAL2243 THR2244 THR2245 GLN2246 GLY2247 VAL2248 LYS2249 SER2250 LEU2251 LEU2252 THR2253 SER2254 MET2255 TYR2256 VAL2257 LYS2258 GLU2259 PHE2260 LEU2261 ILE2262 SER2263 SER2264 SER2265 GLN2266 ASP2267 GLY2268 HIS2269 GLN2270 TRP2271 THR2272 LEU2273 PHE2274 PHE2275 GLN2276 ASN2277 GLY2278 LYS2279 VAL2280 LYS2281 VAL2282 PHE2283 GLN2284 GLY2285 ASN2286 GLN2287 ASP2288 SER2289 PHE2290 THR2291 PRO2292 VAL2293 VAL2294 ASN2295 SER2296 LEU2297 ASP2298 PRO2299 PRO2300 LEU2301 LEU2302 THR2303 ARG2304 TYR2305 LEU2306 ARG2307 ILE2308 HIS2309 PRO2310 GLN2311 SER2312 TRP2313 VAL2314 HIS2315 GLN2316 ILE2317 ALA2318 LEU2319 ARG2320 MET2321 GLU2322 VAL2323 LEU2324 GLY2325 CYS2326 GLU2327 ALA2328 GLN2329 ASP2330 LEU2331 TYR2332
Ligands
Unit 3 NAG1 NAG2
Unit 4 NAG1 MAN2 MAN3 MAN4
Unit 5 CU757 CA758
Unit 6 CU1 NAG2333 NAG2334
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany