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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE E. COLI KH/S1 DOMAIN TRUNCATED PNPASE
Keywords POLYNUCLEOTIDE PHOSPHORYLASE, MRNA TURNOVER, RNASE, RNA DEGRADATION, RNASE PH DOMAIN, EXORIBONUCLEASE, KINASE, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3CDJ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   POLYNUCLEOTIDE PHOSPHORYLASE  A 445 3382 0
2 Water     36 0 36
total       481 3382 36

Proteins
Unit 1 ASP21 ILE22 THR23 LEU24 LEU25 ASN26 PRO27 ILE28 VAL29 ARG30 LYS31 PHE32 GLN33 TYR34 GLY35 GLN36 HIS37 THR38 VAL39 THR40 LEU41 GLU42 THR43 GLY44 MET45 MET46 ALA47 ARG48 GLN49 ALA50 THR51 ALA52 ALA53 VAL54 MET55 VAL56 SER57 MET58 ASP59 ASP60 THR61 ALA62 VAL63 PHE64 VAL65 THR66 VAL67 VAL68 GLY69 GLN70 LYS71 LYS72 ALA73 LYS74 PRO75 GLY76 GLN77 ASP78 PHE79 PHE80 PRO81 LEU82 THR83 VAL84 ASN85 TYR86 GLN87 GLU88 ARG89 THR90 TYR91 ALA92 ALA93 GLY94 ARG95 ILE96 PRO97 SER108 GLU109 GLY110 GLU111 THR112 LEU113 ILE114 ALA115 ARG116 LEU117 ILE118 ASP119 ARG120 PRO121 ILE122 ARG123 PRO124 LEU125 PHE126 PRO127 GLU128 PHE130 VAL131 ASN132 GLU133 VAL134 GLN135 VAL136 ILE137 ALA138 THR139 VAL140 VAL141 SER142 VAL143 ASN144 PRO145 GLN146 VAL147 ASN148 PRO149 ASP150 ILE151 VAL152 ALA153 MET154 ILE155 GLY156 ALA157 SER158 ALA159 ALA160 LEU161 SER162 LEU163 SER164 GLY165 ILE166 PRO167 PHE168 ASN169 GLY170 PRO171 ILE172 GLY173 ALA174 ALA175 ARG176 VAL177 GLY178 TYR179 ILE180 ASN181 ASP182 GLN183 TYR184 VAL185 LEU186 ASN187 PRO188 THR189 GLN190 ASP191 GLU192 LEU193 LYS194 GLU195 SER196 LYS197 LEU198 ASP199 LEU200 VAL201 VAL202 ALA203 GLY204 THR205 GLU206 ALA207 ALA208 VAL209 LEU210 MET211 VAL212 GLU213 SER214 GLU215 ALA216 GLN217 LEU218 LEU219 SER220 GLU221 ASP222 GLN223 MET224 LEU225 GLY226 ALA227 VAL228 VAL229 PHE230 GLY231 HIS232 GLU233 GLN234 GLN235 GLN236 VAL237 VAL238 ILE239 GLN240 ASN241 ILE242 ASN243 GLU244 LEU245 VAL246 LYS247 GLU248 ALA249 GLY250 LYS251 PRO252 ARG253 TRP254 ASP255 TRP256 GLN257 PRO258 GLU259 PRO260 ALA322 ILE323 GLU324 LYS325 ASN326 VAL327 VAL328 ARG329 SER330 ARG331 VAL332 LEU333 ALA334 GLY335 GLU336 PRO337 ARG338 ILE339 ASP340 GLY341 ARG342 GLU343 LYS344 ASP345 MET346 ILE347 ARG348 GLY349 LEU350 ASP351 VAL352 ARG353 THR354 GLY355 VAL356 LEU357 PRO358 ARG359 THR360 HIS361 GLY362 SER363 ALA364 LEU365 PHE366 THR367 ARG368 GLY369 GLU370 THR371 GLN372 ALA373 LEU374 VAL375 THR376 ALA377 THR378 LEU379 GLY380 THR381 GLU394 ARG395 THR396 ASP397 THR398 PHE399 LEU400 PHE401 HIS402 TYR403 ASN404 PHE405 PRO406 PRO407 TYR408 GLU423 ILE424 GLY425 HIS426 GLY427 ARG428 LEU429 ALA430 LYS431 ARG432 GLY433 VAL434 LEU435 ALA436 VAL437 MET438 PRO439 ASP440 MET441 ASP442 LYS443 PHE444 PRO445 TYR446 THR447 VAL448 ARG449 VAL450 VAL451 SER452 GLU453 ILE454 THR455 GLU456 SER457 ASN458 GLY459 SER460 SER461 SER462 MET463 ALA464 SER465 VAL466 CYS467 GLY468 ALA469 SER470 LEU471 ALA472 LEU473 MET474 ASP475 ALA476 GLY477 VAL478 PRO479 ILE480 LYS481 ALA482 ALA483 VAL484 ALA485 GLY486 ILE487 ALA488 MET489 GLY490 LEU491 VAL492 LYS493 GLU494 GLY495 ASP496 ASN497 TYR498 VAL499 VAL500 LEU501 SER502 ASP503 ILE504 LEU505 GLY506 ASP507 GLU508 ASP509 HIS510 LEU511 GLY512 ASP513 MET514 ASP515 PHE516 LYS517 VAL518 ALA519 GLY520 SER521 ARG522 ASP523 GLY524 ILE525 SER526 ALA527 LEU528 GLN529 MET530 ASP531 ILE532 LYS533 ILE534 GLU535 GLY536 ILE537 THR538 LYS539 GLU540 ILE541 MET542 GLN543 VAL544 ALA545 LEU546 ASN547 GLN548 ALA549 LYS550 GLY551 ALA552 ARG553 LEU554 HIS555 ILE556 LEU557 GLY558 VAL559 MET560 GLU561 GLN562 ALA563

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany