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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF SAMBUCUS NIGRA AGGLUTININ II (SNA-II)-T CRYSTAL FORM- COMPLEXED TO ALPHA1 METHYLGALACTOSE
Keywords BETA-TREFOIL, RICIN-B DOMAIN, GLYCOSYLATION, LECTIN, GLYCOPR SIGNALING PROTEIN, SUGAR BINDING PROTEIN, PLANT PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3CA5     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   AGGLUTININ II  A 257 1976 0
2  Ligand    B 3 0 38
3  Ligand    C 3 0 38
4  Ligand    D 2 0 28
5  Ligand   AGGLUTININ II  A 9 0 69
6 Water     341 0 341
total       615 1976 514

Proteins
Unit 1 THR1 SER2 PHE3 THR4 ARG5 ASN6 ILE7 VAL8 GLY9 ARG10 ASP11 GLY12 LEU13 CYS14 VAL15 ASP16 VAL17 ARG18 ASN19 GLY20 TYR21 ASP22 THR23 ASP24 GLY25 THR26 PRO27 LEU28 GLN29 LEU30 TRP31 PRO32 CYS33 GLY34 THR35 GLN36 ARG37 ASN38 GLN39 ARG40 TRP41 THR42 PHE43 ASP44 SER45 ASP46 ASP47 THR48 ILE49 ARG50 SER51 MET52 GLY53 LYS54 CYS55 MET56 THR57 ALA58 ASN59 GLY60 LEU61 ASN62 ASN63 GLY64 SER65 ASN66 ILE67 VAL68 ILE69 PHE70 ASN71 CYS72 SER73 THR74 ALA75 ALA76 GLU77 ASN78 ALA79 ILE80 LYS81 TRP82 GLU83 VAL84 PRO85 ILE86 ASP87 GLY88 SER89 ILE90 ILE91 ASN92 PRO93 SER94 SER95 GLY96 LEU97 VAL98 MET99 THR100 ALA101 PRO102 ARG103 ALA104 ALA105 SER106 ARG107 THR108 ILE109 LEU110 LEU111 LEU112 GLU113 ASP114 ASN115 ILE116 TYR117 ALA118 ALA119 SER120 GLN121 GLY122 TRP123 THR124 VAL125 THR126 ASN127 ASN128 VAL129 LYS130 PRO131 ILE132 VAL133 ALA134 SER135 ILE136 VAL137 GLY138 TYR139 LYS140 GLU141 MET142 CYS143 LEU144 GLN145 SER146 ASN147 GLY148 GLU149 ASN150 ASN151 GLY152 VAL153 TRP154 MET155 GLU156 ASP157 CYS158 GLU159 ALA160 THR161 SER162 LEU163 GLN164 GLN165 GLN166 TRP167 ALA168 LEU169 TYR170 GLY171 ASP172 ARG173 THR174 ILE175 ARG176 VAL177 ASN178 SER179 THR180 ARG181 GLY182 LEU183 CYS184 VAL185 THR186 THR187 ASN188 GLY189 TYR190 ASN191 SER192 LYS193 ASP194 LEU195 ILE196 ILE197 ILE198 LEU199 LYS200 CYS201 GLN202 GLY203 LEU204 PRO205 SER206 GLN207 ARG208 TRP209 PHE210 PHE211 ASN212 SER213 ASP214 GLY215 ALA216 ILE217 VAL218 ASN219 PRO220 LYS221 SER222 ARG223 LEU224 VAL225 MET226 ASP227 VAL228 ARG229 ALA230 SER231 ASN232 VAL233 SER234 LEU235 ARG236 GLU237 ILE238 ILE239 ILE240 PHE241 PRO242 ALA243 THR244 GLY245 ASN246 PRO247 ASN248 GLN249 GLN250 TRP251 VAL252 THR253 GLN254 VAL255 LEU256 PRO257

Ligands
Unit 2 NAG1 FUC2 NAG3
Unit 3 NAG1 FUC2 NAG3
Unit 4 NAG1 NAG2
Unit 5 NAG266 AMG267 AMG268 SO4901 SO4902 SO4903 SO4904 SO4905 ACT910

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany